BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmnc10d20 (734 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC035516-1|AAH35516.1| 467|Homo sapiens coiled-coil domain cont... 30 9.9 AK022862-1|BAB14278.1| 467|Homo sapiens protein ( Homo sapiens ... 30 9.9 >BC035516-1|AAH35516.1| 467|Homo sapiens coiled-coil domain containing 71 protein. Length = 467 Score = 29.9 bits (64), Expect = 9.9 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +1 Query: 235 PGNPRPRASAKTIKTIPRC 291 PGNPRP+A KT P+C Sbjct: 220 PGNPRPKAPRKTTSKGPKC 238 >AK022862-1|BAB14278.1| 467|Homo sapiens protein ( Homo sapiens cDNA FLJ12800 fis, clone NT2RP2002079, weakly similar to HISTONE H1, GONADAL. ). Length = 467 Score = 29.9 bits (64), Expect = 9.9 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +1 Query: 235 PGNPRPRASAKTIKTIPRC 291 PGNPRP+A KT P+C Sbjct: 220 PGNPRPKAPRKTTSKGPKC 238 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 97,906,671 Number of Sequences: 237096 Number of extensions: 1918791 Number of successful extensions: 6751 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 5990 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6751 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8735159784 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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