Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0141
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   0.91 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.8  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +2

Query: 281 LQEHYQ-HNKVCNILIT-NSCF 340
           ++EH   HNK+CN++   N CF
Sbjct: 209 VKEHQNLHNKICNLIDEFNECF 230


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 19/72 (26%), Positives = 36/72 (50%)
 Frame = +1

Query: 361 NINFMSLTCIFILVVLHNLKNNNYMLC*LISTINI*MLLIMED*LRLNYIFVYLKA*LVV 540
           N NF    C F+ +VL +L     + C L    NI    +M++    + +F++  A +++
Sbjct: 48  NYNFTK-KCYFLRMVLIDLL---IVGCILKHIFNI----LMKNVTLNDVVFIFCSAPIII 99

Query: 541 IEMDLNIILYYN 576
             +D+ I+ Y N
Sbjct: 100 TILDIEILGYVN 111


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 564 NDIQIHLNHNQL 529
           N +QI+L HNQ+
Sbjct: 12  NSLQIYLQHNQI 23


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 564 NDIQIHLNHNQL 529
           N +QI+L HNQ+
Sbjct: 30  NSLQIYLQHNQI 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,630
Number of Sequences: 336
Number of extensions: 2603
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)