BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120042.Seq (745 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 23 2.6 EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 21 7.9 AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 21 7.9 >AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 protein protein. Length = 301 Score = 23.0 bits (47), Expect = 2.6 Identities = 8/24 (33%), Positives = 13/24 (54%) Frame = +1 Query: 157 PPKPMQCWIHPRRANCKVTRPRNN 228 P +Q W RRA C+ + ++N Sbjct: 109 PESRVQVWFKNRRAKCRQQQKQHN 132 >EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 protein. Length = 475 Score = 21.4 bits (43), Expect = 7.9 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +2 Query: 167 RCNAGYILDE 196 RCNAG + DE Sbjct: 453 RCNAGLVFDE 462 >AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor candidate 54 protein. Length = 311 Score = 21.4 bits (43), Expect = 7.9 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 4/38 (10%) Frame = -1 Query: 286 NTLFNTVMCNI----RFRYRDLNNCYVDALLCNSLVED 185 +T+F ++CN+ + RY+DLN + + L+ D Sbjct: 120 HTIF--LVCNVLTVFKIRYKDLNKALESSKISVGLIRD 155 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 154,641 Number of Sequences: 336 Number of extensions: 2938 Number of successful extensions: 12 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 122,585 effective HSP length: 56 effective length of database: 103,769 effective search space used: 19819879 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -