BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120006.Seq (617 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal prot... 167 1e-41 BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p pro... 167 1e-41 AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p pro... 167 1e-41 AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA... 167 1e-41 AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p pro... 29 6.6 AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-P... 29 6.6 AF132190-1|AAD34778.1| 1398|Drosophila melanogaster unknown prot... 28 8.8 AE014297-3357|AAN13952.1| 1398|Drosophila melanogaster CG10254-P... 28 8.8 AE014297-3356|AAF56162.1| 1398|Drosophila melanogaster CG10254-P... 28 8.8 >U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal protein DL11 protein. Length = 184 Score = 167 bits (406), Expect = 1e-41 Identities = 76/84 (90%), Positives = 81/84 (96%) Frame = +1 Query: 256 AKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 435 AKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR Sbjct: 82 AKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 141 Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507 PG+NV HR+RK+G VGF HRLTKE Sbjct: 142 PGYNVNHRKRKSGTVGFQHRLTKE 165 Score = 133 bits (321), Expect = 2e-31 Identities = 66/82 (80%), Positives = 72/82 (87%), Gaps = 1/82 (1%) Frame = +2 Query: 44 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 223 D ++ +LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN Sbjct: 11 DPAQEPDEDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70 Query: 224 EKIAVHCTVRELKQKKSL-RGV 286 EKIAVHCTVR K ++ L RG+ Sbjct: 71 EKIAVHCTVRGAKAEEILERGL 92 Score = 32.7 bits (71), Expect = 0.41 Identities = 17/27 (62%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +3 Query: 471 RKSGISPPPH---KGSAMKWFQQKYDG 542 RKSG H K AMKWFQQKYDG Sbjct: 151 RKSGTVGFQHRLTKEDAMKWFQQKYDG 177 >BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p protein. Length = 163 Score = 167 bits (406), Expect = 1e-41 Identities = 76/84 (90%), Positives = 81/84 (96%) Frame = +1 Query: 256 AKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 435 AKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR Sbjct: 61 AKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 120 Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507 PG+NV HR+RK+G VGF HRLTKE Sbjct: 121 PGYNVNHRKRKSGTVGFQHRLTKE 144 Score = 46.8 bits (106), Expect = 2e-05 Identities = 24/34 (70%), Positives = 27/34 (79%), Gaps = 1/34 (2%) Frame = +2 Query: 188 RYTVRSFGIRRNEKIAVHCTVRELKQKKSL-RGV 286 R VRSFGIRRNEKIAVHCTVR K ++ L RG+ Sbjct: 38 RRCVRSFGIRRNEKIAVHCTVRGAKAEEILERGL 71 Score = 32.7 bits (71), Expect = 0.41 Identities = 17/27 (62%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +3 Query: 471 RKSGISPPPH---KGSAMKWFQQKYDG 542 RKSG H K AMKWFQQKYDG Sbjct: 130 RKSGTVGFQHRLTKEDAMKWFQQKYDG 156 >AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p protein. Length = 184 Score = 167 bits (406), Expect = 1e-41 Identities = 76/84 (90%), Positives = 81/84 (96%) Frame = +1 Query: 256 AKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 435 AKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR Sbjct: 82 AKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 141 Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507 PG+NV HR+RK+G VGF HRLTKE Sbjct: 142 PGYNVNHRKRKSGTVGFQHRLTKE 165 Score = 142 bits (344), Expect = 3e-34 Identities = 70/82 (85%), Positives = 75/82 (91%), Gaps = 1/82 (1%) Frame = +2 Query: 44 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 223 D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN Sbjct: 11 DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70 Query: 224 EKIAVHCTVRELKQKKSL-RGV 286 EKIAVHCTVR K ++ L RG+ Sbjct: 71 EKIAVHCTVRGAKAEEILERGL 92 Score = 32.7 bits (71), Expect = 0.41 Identities = 17/27 (62%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +3 Query: 471 RKSGISPPPH---KGSAMKWFQQKYDG 542 RKSG H K AMKWFQQKYDG Sbjct: 151 RKSGTVGFQHRLTKEDAMKWFQQKYDG 177 >AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA protein. Length = 184 Score = 167 bits (406), Expect = 1e-41 Identities = 76/84 (90%), Positives = 81/84 (96%) Frame = +1 Query: 256 AKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 435 AKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR Sbjct: 82 AKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 141 Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507 PG+NV HR+RK+G VGF HRLTKE Sbjct: 142 PGYNVNHRKRKSGTVGFQHRLTKE 165 Score = 142 bits (344), Expect = 3e-34 Identities = 70/82 (85%), Positives = 75/82 (91%), Gaps = 1/82 (1%) Frame = +2 Query: 44 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 223 D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN Sbjct: 11 DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70 Query: 224 EKIAVHCTVRELKQKKSL-RGV 286 EKIAVHCTVR K ++ L RG+ Sbjct: 71 EKIAVHCTVRGAKAEEILERGL 92 Score = 32.7 bits (71), Expect = 0.41 Identities = 17/27 (62%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +3 Query: 471 RKSGISPPPH---KGSAMKWFQQKYDG 542 RKSG H K AMKWFQQKYDG Sbjct: 151 RKSGTVGFQHRLTKEDAMKWFQQKYDG 177 >AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p protein. Length = 2171 Score = 28.7 bits (61), Expect = 6.6 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 157 ELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHYI 56 ELL HLG Q GF T ++ L + +PHY+ Sbjct: 626 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHYM 658 >AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-PA protein. Length = 2599 Score = 28.7 bits (61), Expect = 6.6 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 157 ELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHYI 56 ELL HLG Q GF T ++ L + +PHY+ Sbjct: 1054 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHYM 1086 >AF132190-1|AAD34778.1| 1398|Drosophila melanogaster unknown protein. Length = 1398 Score = 28.3 bits (60), Expect = 8.8 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 26 GEEGSEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL 157 G +GSED+ + N HI + + DR T A KVLE++ Sbjct: 722 GSDGSEDSWETESENSHISSSDNDDDILTGIDRATEAMKVLEKM 765 >AE014297-3357|AAN13952.1| 1398|Drosophila melanogaster CG10254-PB, isoform B protein. Length = 1398 Score = 28.3 bits (60), Expect = 8.8 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 26 GEEGSEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL 157 G +GSED+ + N HI + + DR T A KVLE++ Sbjct: 722 GSDGSEDSWETESENSHISSSDNDDDILTGIDRATEAMKVLEKM 765 >AE014297-3356|AAF56162.1| 1398|Drosophila melanogaster CG10254-PA, isoform A protein. Length = 1398 Score = 28.3 bits (60), Expect = 8.8 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 26 GEEGSEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL 157 G +GSED+ + N HI + + DR T A KVLE++ Sbjct: 722 GSDGSEDSWETESENSHISSSDNDDDILTGIDRATEAMKVLEKM 765 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,034,813 Number of Sequences: 53049 Number of extensions: 564641 Number of successful extensions: 1335 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1302 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1335 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2538517050 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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