Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021163
(710 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 46 3e-05
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 42 5e-04
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 42 5e-04
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 41 9e-04
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 40 0.002
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 37 0.014
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 37 0.019
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 36 0.032
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 35 0.057
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 35 0.057
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 35 0.057
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.075
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 35 0.075
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 35 0.075
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 35 0.075
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 34 0.099
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 34 0.099
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.099
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.099
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 34 0.099
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 32 0.40
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 31 0.70
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.70
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.70
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 31 0.92
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 30 1.6
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 30 1.6
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 30 2.1
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 30 2.1
SB_50664| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 29 3.7
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 29 4.9
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_41255| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 29 4.9
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 28 6.5
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 28 6.5
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 28 8.6
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 28 8.6
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 28 8.6
SB_48623| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27) 28 8.6
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 121 KIFIGNLS-DKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVA 258
+IFIGNL+ DK DL +F ++G V+ C + N+GFV E E+ A
Sbjct: 47 RIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFETEKGA 93
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 326 SRKAPSTPTTKIFVGNL-TDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDA 502
++ P + +IF+GNL TDK ++ E+F + G V+ C + N+GFV + ++A
Sbjct: 37 NKNDPHSVRCRIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFETEKGADEA 96
Query: 503 I 505
+
Sbjct: 97 V 97
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +1
Query: 493 ERRYQKLNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGPLVQRSARSAGPRPQ 672
E ++L+G + GQ ++V+L+ R RP MG E+CY CGR G + R +
Sbjct: 82 EDAVRELDGRYICGQRVRVELAKGPSRGRPRMGSNEKCYECGRVGHFARDCTRRRYGGGR 141
Query: 673 RFPRSSVRPR 702
F S R R
Sbjct: 142 SFSNSPKRER 151
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 353 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIK 508
TK+++G+L D E+ F +G + + + RN + F D D DA++
Sbjct: 32 TKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVR 86
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 42.3 bits (95), Expect = 4e-04
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +2
Query: 353 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIK 508
T++FVG L+ +T+ ++ +F +G ++ CD+ YGF+ + D +A++
Sbjct: 6 TQLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDAEEAMR 57
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 100 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVA 258
M GT ++F+G LS +T DL +F YG ++ CD+ YGF+ E+ + A
Sbjct: 1 MASRGT-QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDA 52
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVA 258
++++G L TTE D+R F YG + + ++ NYGFV E+++ A
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDA 49
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAI 505
++++G L T +VR F+ +G + + ++ NYGFV + D +DA+
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAV 53
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Frame = +2
Query: 326 SRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATG 487
S+ + S KIF+G L T +++ F ++GT+V+C I+ R +GFV +++
Sbjct: 41 SKMSESEKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYESSD 100
Query: 488 DVNDAIK 508
VN+ +K
Sbjct: 101 SVNEVLK 107
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMEN 246
KIFIG L+ TTE L+ F ++GT+V+C I+ R +GFV E+
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYES 98
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 7/53 (13%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVA 258
+IF+ + +TTE++LR FE+YG V E IVR+ Y F+ E+++VA
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQEVA 61
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
+IFV +T E+R F+++G V E IVR+
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRD 42
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 103 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG 228
PG T +F+GN+ TT DL+ FE+YG V++ DI + G
Sbjct: 245 PGC-TRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG 285
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 350 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG 463
T +FVGN+ T +++E F+++G V++ DI + G
Sbjct: 248 TRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG 285
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 493 ERRYQKLNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGPLVQR-SARSAGPRP 669
E ++L+G + GQ +V+L+ R RP E+CY CGR G + + R G
Sbjct: 52 EDAVRELDGRYICGQRARVELAKGPSRGRPRQASNEKCYECGRVGHFARDCTRRRYGGGR 111
Query: 670 QRFPRSSVRPRS 705
PR R RS
Sbjct: 112 SPSPRGRRRSRS 123
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 350 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIK 508
TTK++VGNL + E+ F+KFG + + + RN + FV + D +A++
Sbjct: 3 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVR 58
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 115 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-YGFVHMENE 249
T K+++GNL ++L FEK+G + + + RN GF +E E
Sbjct: 3 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYE 48
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-YGFVHMENEQV 255
+ + K+F+G + E DLRP+FE YG + E I+++ Y H ++ ++
Sbjct: 167 SNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKDDRKL 216
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
K+F+G +S E DLR +F +GT+ E ++RN
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+FVG ++ + ++R +F FGT+ E ++RN
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 109 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGF 231
TG ++F+GNL D E +++ +F+KYG V E I + GF
Sbjct: 50 TGRCRLFVGNLID-CDEEEMKEMFKKYGEVAEVFINKEKGF 89
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 344 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 478
T ++FVGNL D E++E+F+K+G V E I + +GF+ LD
Sbjct: 50 TGRCRLFVGNLIDCDEE-EMKEMFKKYGEVAEVFINKEKGFGFIRLD 95
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 35.9 bits (79), Expect = 0.032
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+F+ L+ TT+ DL +F ++GT++ C+++R+
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRD 154
Score = 31.9 bits (69), Expect = 0.53
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 347 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
P +FV L T ++ +F +FGT++ C+++R+
Sbjct: 118 PDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRD 154
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+++GNL T +DL +FE+YG VV+ I+R+
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRD 44
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 35.1 bits (77), Expect = 0.057
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVE 204
++FIGNL +AD+ +F KYGT++E
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILE 385
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 326 SRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 439
+R AP + ++F+GNL + +V E+F K+GT++E
Sbjct: 350 ARSAPDSH--QVFIGNLPSGVKDADVNEVFSKYGTILE 385
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 35.1 bits (77), Expect = 0.057
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI 213
K+F+G LS +TT+ L+ F KYG +V DI
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDI 60
Score = 34.3 bits (75), Expect = 0.099
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 284 ELVHGQ-AIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 448
E V+G +++ K+R K+FVG L+ +T ++E F K+G +V DI
Sbjct: 5 EAVNGYIGTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDI 60
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 317 AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQK-FGTVVECDIVRNY 460
AA K P KIFVG L +T ++RE F K + V E + + +
Sbjct: 91 AAPIGKPPHLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEH 139
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG------FVHLDATGDVNDAIK 508
+++VGNL R ++ ++F K+G + + D+ G FV + D DA+K
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVK 318
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG 228
++++GNL E DL +F KYG + + D+ G
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRG 297
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 34.7 bits (76), Expect = 0.075
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Frame = +1
Query: 115 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVAA 261
T +F+GNL + DLR FEK+G V++ DI R Y FV + VAA
Sbjct: 236 TRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGNTYAFVKFADLDVAA 291
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 350 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 454
T +FVGNL ++R F+KFG V++ DI R
Sbjct: 236 TRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKR 270
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 290 VHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECD 445
+ GQ I K S TT+++VG L PE+ F +FG + D
Sbjct: 297 MQGQCIGRNHIKIGYGRSQQTTRLWVGGLGPWISIPELEREFDRFGAIRRID 348
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQVAANHSES*RRVSSW 297
I++G+L+ T+ L+ +FE++GT+ D++ R ++ ME + A + R + +
Sbjct: 543 IWVGHLAKIVTQDTLQGIFEEHGTITSIDLIPPRGCAYIQMEKREDAYRALDKLRNIKLY 602
Query: 298 AGDQNRSGQEPEGAVDANH 354
+ +G D +
Sbjct: 603 GNSVKLAWAPAKGVKDREY 621
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 139 LSDKTTEADLRPLFEKYGTVVECDIVRNY 225
LS TTE DLRP+FEKYG V IV ++
Sbjct: 188 LSLYTTERDLRPVFEKYGPVEAIQIVYDH 216
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVA 258
+I+I ++ E D++ +FE +G VV C + + YGF+ EN+Q A
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSA 253
Score = 31.9 bits (69), Expect = 0.53
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Frame = +2
Query: 266 IQNLNGELVHGQAIKIEAAKS--RKAP--------STPTTKIFVGNLTDKTRAPEVRELF 415
++ +NG L+ G+ IK+ + + AP + +I++ ++ +++ +F
Sbjct: 160 LEQMNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVF 219
Query: 416 QKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKS 511
+ FG VV C + + YGF+ + NDAI S
Sbjct: 220 EAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 34.3 bits (75), Expect = 0.099
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +2
Query: 278 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
NGE + G I+++ A + KA + +F+GNL +RELF G V ++R+
Sbjct: 32 NGEEIDGFHIRVDLASNDKAHDHQRS-VFIGNLPFDIEEEPLRELFTTCGNVESVRLIRD 90
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 34.3 bits (75), Expect = 0.099
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVA 258
I++ N+ +E L+ +F KYG + + +R+YGFV+ + A
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVYFAKRESA 48
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 359 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVH 472
I+V N+ +++ +F K+G + + +R+YGFV+
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVY 41
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 34.3 bits (75), Expect = 0.099
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYG----TVVECDIV----RNYGFVHMENEQVAAN 264
K+F+G L+ +TT LR FE YG VV CD R +G+V + +V N
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRN 70
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 34.3 bits (75), Expect = 0.099
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 451
K+FVGN+ K RA E+++ F FG VV I+
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQII 111
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVAANHSES 276
K+F+GN+ K +L+ F +G VV I+ R+ G N ++ A+ ++S
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKGTQDYRNTEILADINQS 137
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 34.3 bits (75), Expect = 0.099
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 350 TTKIFVGNLTDKTRAPEVRELFQKFGT--VVECDIVRNYGFVHLDATGDVNDAI 505
+ ++++G L TR +V++ F +G + E + YGFV D + D DA+
Sbjct: 2 SNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKDGYGFVEFDYSDDAEDAV 55
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTV--VECDIVRNYGFVHMENEQVAAN 264
IF+ L + T L LF YG + +E + + YGFV+M N + A +
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLDKGYGFVNMSNYEEACH 322
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 112 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
G +++ NLS T ADL+ F +YG VV IV N
Sbjct: 347 GGKSLWVANLSSITRAADLKTRFSQYGKVVGAKIVTN 383
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +2
Query: 290 VHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI---VRNY 460
+ G+ ++ + ++ + P K+FVG L + T + E F +FG V + I R++
Sbjct: 179 IQGRLCEVRLPRPKEELNVPK-KLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHF 237
Query: 461 GFV 469
GFV
Sbjct: 238 GFV 240
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI---VRNYGFV 234
K+F+G L + TTE L F ++G V + I R++GFV
Sbjct: 200 KLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHFGFV 240
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = +1
Query: 94 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI--------VRNYGFVHMENE 249
+K+ G + + L TTE++++ F ++G + C++ R +GFV + +
Sbjct: 107 TKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKD 166
Query: 250 QVAAN 264
+ A N
Sbjct: 167 EDAKN 171
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 103 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVV--------ECDIVRNYGFVHMENEQVA 258
PG +FI +L + T+ADL F+ +GTV+ + ++ + +GFV +N A
Sbjct: 272 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSA 331
Query: 259 AN 264
N
Sbjct: 332 QN 333
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+++ N+ + EA+ R FE YG +V C ++R+
Sbjct: 135 LYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRD 167
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 237
+++ NLS TE L+ + +YG V +++Y FVH
Sbjct: 331 VYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVH 368
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQ 252
+++GNL + +L+ +F +YG+++E + + Y F++ E+
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFINARGEK 661
Score = 31.1 bits (67), Expect = 0.92
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Frame = +2
Query: 323 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDAT 484
++R P ++VGNL K + +F K VV C ++ + Y FV +
Sbjct: 359 RARYFPEEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETH 418
Query: 485 GDVNDA 502
D +A
Sbjct: 419 ADAQEA 424
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+++GNL K T+ + +F K VV C ++ +
Sbjct: 371 LYVGNLDPKCTQELICSIFNKIAKVVRCKMINS 403
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTV 198
K+FIG L+ TTE DL+ F YG V
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 323 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 448
+ +++P+ TK++V +LT V+E+F +G V D+
Sbjct: 1147 RRKRSPTPKPTKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDL 1188
Score = 28.3 bits (60), Expect = 6.5
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Frame = +1
Query: 490 CERRYQKLNGMMVDGQPMKVQ---------LSTSRVRQRPGMGDPEQCYRC-----GRGG 627
CE+ + ++G +DGQ + VQ + + R P P+Q R G GG
Sbjct: 1211 CEKALKHMDGGQIDGQEIAVQSVLPPRPRDVRPAYRRPSPPRRRPQQWRRSPPRFRGGGG 1270
Query: 628 PLVQRSARSAGPRPQRFPRSSVRPRS 705
R +RS P P+R RS R RS
Sbjct: 1271 FRPMRRSRSGSPPPRR-RRSPSRSRS 1295
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENE 249
+F+G L+ T E L+ FE++G V I+ RNYGFV +++
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFVLFKDD 130
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +2
Query: 359 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIK 508
+FVG L T +++ F++FG V I+ RNYGFV G + +K
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFVLFKDDGPSKEVLK 138
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 88 P*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 216
P + G +F+ NLS+ T E D+ F YG V + I+
Sbjct: 309 PNEEKQGVRERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHIL 351
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +1
Query: 112 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVAANH 267
G ++++G+L TEA ++ +FE +GTV ++ + YGFV + A
Sbjct: 240 GPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 299
Query: 268 SE 273
E
Sbjct: 300 ME 301
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 103 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 213
PG +FI +L + T+ADL F+ +GTV+ +
Sbjct: 224 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKV 260
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 103 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECD 210
P + + + NLS +T+ DL+ F KYG V D
Sbjct: 793 PVRTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYAD 828
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 389 RAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAI 505
R +V + + +G + + + R YGFV D D DA+
Sbjct: 701 RESDVEKFLRGYGKIRDISLKRGYGFVEFDDHRDAEDAV 739
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 31.1 bits (67), Expect = 0.92
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 59 IYCYSLYIVTHNLKCRAPVLSKSSSGTFLIKPQKPILDRYSKNTVRS*NAISSEITVSCT 238
IYC S + V + APVL K + T +I+P P+ ++ N AI E+ +S T
Sbjct: 186 IYCASKFAVEGYAEAMAPVLGKFNIKTTIIEP-GPVATNFASNA----KAIRDEVDISGT 240
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +2
Query: 257 PRTIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 436
P+ Q + G + ++ + S P +P KIF+G L + +V+EL FG +
Sbjct: 643 PKDYQPIPG-MSENASVHVPGVVSTVVPDSPH-KIFIGGLPNYLNEDQVKELLSSFGELR 700
Query: 437 ECDIVRN 457
++V++
Sbjct: 701 AFNLVKD 707
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 493 ERRYQKLNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGG 627
++ K +G +DG+PMKV + R +R G G YR G GG
Sbjct: 64 DKAIDKFDGEDLDGRPMKVNKAQPR-GERGGGGSQGGGYRSGGGG 107
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTV 198
K +IGNL K EADL+ F +Y V
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRYDVV 256
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 493 ERRYQKLNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGG 627
E +L+G DG+ MKV + SR ++ G G YR G GG
Sbjct: 284 EDAINELDGQEFDGRSMKVNQARSREQRGGGRGGG---YRSGGGG 325
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 88 P*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG 228
P +P +F+GNLS E L FE+ G C ++ G
Sbjct: 170 PKKTVPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQEG 216
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Frame = +2
Query: 359 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAI 505
+FV NL + E+ ELF K G V + +V N YG+V + + A+
Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAV 228
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 118 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
F+IF G+L + T+ L F KY + ++ IVR+
Sbjct: 217 FRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRD 251
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 344 TPTTKIFVGNLTDKTRAPEVRELFQKFGTV 433
T T KIF+G L+ T ++++ F +FG V
Sbjct: 180 TTTKKIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIK 508
K+++GNL + E+ + F++FG V + DI+R+ +GFV L + + AI+
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIE 67
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
K++IGNL+ + E ++ FE++G V + DI+R+
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRD 42
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 13/62 (20%)
Frame = +1
Query: 100 MPGTGTFKI-----FIGNLSDKTTEADLRPLFEKYGTVV--------ECDIVRNYGFVHM 240
+P TG K+ +I L TT+ DL L KYGT++ + ++ + YGFV
Sbjct: 89 LPDTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDF 148
Query: 241 EN 246
E+
Sbjct: 149 ES 150
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV 216
+FI NLS +T+ ++ LF+++G + C +V
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVV 448
>SB_50664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = -3
Query: 609 VALLGVAHARPLPD---TTRRQLHLH-GLSVD-HHTVQLLIASFTSPVASKCTKP*LR-T 448
++L+G+A +R LPD T ++ LH +SVD +TV L + S CTK R
Sbjct: 72 ISLIGIAASRSLPDDSFTCALRVFLHCFVSVDASNTVALCNMAIASRAIRNCTKNVRRQL 131
Query: 447 ISHSTTV 427
+ HS V
Sbjct: 132 VKHSNVV 138
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 398 EVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKS 511
++R L+Q + V +CDI+ + + TGD +DA+K+
Sbjct: 436 QLRALYQAYQHVAKCDILET---IDDELTGDYHDAVKA 470
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 227 VSCTWKTNKWPRTIQNLNGELVHGQAIKIEAAKSRKAP 340
+ C WK PR + + L+ G ++ EAA+ R AP
Sbjct: 1636 IKCFWKVLNTPRAFHSFHMALIEGTFLQ-EAARKRLAP 1672
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMEN 246
+++ G L E DL YG V E + YGFV ++
Sbjct: 6 RVYFGRLPRDCRERDLEKFVRGYGRVREISMKLGYGFVEFDD 47
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Frame = +2
Query: 344 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGD 490
T TK+FVG + ++ +R+ F +FG + E ++++ YGFV + AT D
Sbjct: 7 TKFTKLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTM-ATSD 62
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 112 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
G + + NL+ +TT DL+ +F+KYG + + I R+
Sbjct: 14 GMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRD 50
>SB_41255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 203 NAISSEITVSCTWKTNKWPRTIQNLNGELVHGQAIKIEAAKSRKAPSTP 349
N SS IT+ T+K + P T L V+ + + AP+TP
Sbjct: 114 NHWSSSITLKATYKHRQHPNTCNGLPITTVYSPTVSPSYGRGCSAPTTP 162
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 564 SCPAAAGHGRPRAVLPLWPRGATGPKECPKR 656
+CPA H + P+ PR GP E P R
Sbjct: 68 TCPAEKHHRSSKETPPVQPRNLAGPAEKPHR 98
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+ I NL E DL+ L + YG V+ C+I R+
Sbjct: 121 LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERD 153
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 493 ERRYQKLNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGG 627
E+ + +G DG+PMKV + R + G G YR G GG
Sbjct: 59 EKAIDEFDGQDFDGRPMKVNQAQPRGERGAG-GSRAGGYRSGGGG 102
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI 213
K+F+G L++ TTE +R F+ + E D+
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADV 39
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 28.3 bits (60), Expect = 6.5
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Frame = +2
Query: 188 TVRS*NAISSEITVSCTW-----KT-NKWP-RTIQNLNGELVHGQAIKIEAAKSRKAPST 346
T+R+ N + SE+ S + KT N W R + +L G + + + A S
Sbjct: 465 TIRTWNLLPSEVVESSSIDSFKSKTGNDWLFRQLPSLQGPCIAFWVFQEVNEGFKMAASF 524
Query: 347 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
P +++G L++ + ELF KFG V + I+R+
Sbjct: 525 P---VWIGGLSEDVTENVLLELFNKFGPVKDVVILRD 558
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVA 258
+F+GN+ + +E L+ +F + G V+ +V + YGF ++++ A
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETA 79
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2
Query: 266 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 439
I+ +N V+G+ I++ A + +F+GNL + + + F FG +++
Sbjct: 71 IKVMNMIKVYGKPIRVNKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQ 128
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/104 (20%), Positives = 38/104 (36%)
Frame = +2
Query: 98 KCRAPVLSKSSSGTFLIKPQKPILDRYSKNTVRS*NAISSEITVSCTWKTNKWPRTIQNL 277
K A + + + TFL + S +T + + +++ T + + T K T
Sbjct: 417 KATASTQTAAEANTFLSTQKTDATTSQSTSTTEATKSQTTKATTTLSTSTTKATTTSSTS 476
Query: 278 NGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRE 409
+ + K+ PST TTK + T +P E
Sbjct: 477 TTKAT--TTLSTSTTKATTTPSTSTTKATTSTAVEATTSPAATE 518
>SB_48623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 369
Score = 27.9 bits (59), Expect = 8.6
Identities = 28/108 (25%), Positives = 41/108 (37%)
Frame = -2
Query: 646 HSFGPVAPRGHSGSTARGRPCPAAAGHDSSTTAPSWAVRRPSYRSTFDSVVHIARRVQMH 467
H+ PV PR ST PC +A S + ++ S F SV ++ M
Sbjct: 40 HTLAPVGPR-RDASTVY-YPCSSATMTTVYYPCSSATMDSSAWNSRFASVKLHRQKNYMA 97
Query: 466 EAVVTHDIALDDRPELLKQLADFGRARLVR*ITHEYFSGWRRRRLPAL 323
+ T R + D R L+ ITH F+ + RR+ L
Sbjct: 98 TSTRTKRFKQQLRSMWDLESCDLARVMLIVRITHATFASLKLRRISKL 145
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFV 234
+++G L K TE DLR F ++G + +V +N FV
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNCAFV 344
>SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)
Length = 1019
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 634 PVAPRGHSGSTARGRPCPAAAGHDSSTTAPSWAVRRPSY 518
P+APRG SGS G P H S W V SY
Sbjct: 294 PIAPRGPSGSYPAGAP---DVSHRGSPLGSPWRVPYLSY 329
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,495,700
Number of Sequences: 59808
Number of extensions: 524989
Number of successful extensions: 1841
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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