KWMTBOMO09862

Protein

Length

2,876 amino acids

Protein family membership

None predicted.

Domains and repeats

Domain
368 - 384
Zinc finger, CCHC-type (IPR001878)
387 - 402
Zinc finger, CCHC-type (IPR001878)
681 - 1,074
Reverse transcriptase domain (IPR000477)
1,920 - 1,965
Zinc finger, CCHC-type (IPR001878)
2,035 - 2,127
Endonuclease/exonuclease/phosphatase (IPR005135)
2,288 - 2,566
Reverse transcriptase domain (IPR000477)

1 500 1000 1500 2000 2500 2876

Detailed signature matches

IPR001878

Zinc finger, CCHC-type
1. PS50158 (ZF_CCHC)
  
  1,950 - 1,963
  
  PROSITE profiles
  PS50158 (ZF_CCHC)
2. G3DSA:4.10.60.10
  
  1,920 - 1,965
  
  GENE3D
  G3DSA:4.10.60.10 (G3DSA:4.10.60.10)
3. SM00343 (c2hcfinal6)
  
  368 - 384
  
  SMART
  SM00343 (c2hcfinal6)
  
  1,926 - 1,942
  
  SMART
  SM00343 (c2hcfinal6)
  
  387 - 402
  
  SMART
  SM00343 (c2hcfinal6)
  
  1,949 - 1,965
  
  SMART
  SM00343 (c2hcfinal6)
4. SSF57756 (Retroviru...)
  
  1,922 - 1,965
  
  SUPERFAMILY
  SSF57756 (Retrovirus zinc finger-like domains)
IPR000477

Reverse transcriptase domain
1. PF00078 (RVT_1)
  
  2,311 - 2,566
  
  Pfam
  PF00078 (RVT_1)
  
  936 - 1,073
  
  Pfam
  PF00078 (RVT_1)
2. PS50878 (RT_POL)
  
  2,288 - 2,566
  
  PROSITE profiles
  PS50878 (RT_POL)
  
  681 - 1,074
  
  PROSITE profiles
  PS50878 (RT_POL)
IPR005135

Endonuclease/exonuclease/phosphatase
1. G3DSA:3.60.10.10
  
  2,036 - 2,127
  
  GENE3D
  G3DSA:3.60.10.10 (G3DSA:3.60.10.10)
2. SSF56219 (DNase I-like)
  
  2,035 - 2,126
  
  SUPERFAMILY
  SSF56219 (DNase I-like)

no IPR

Unintegrated signatures

Coil

1,565 - 1,585

COILS
Coil (Coil)
SSF56672 (DNA/RNA p...)

2,242 - 2,534

SUPERFAMILY
SSF56672 (DNA/RNA polymerases)

814 - 1,042

SUPERFAMILY
SSF56672 (DNA/RNA polymerases)
cd01650 (RT_nLTR_like)

897 - 1,074

CDD
cd01650 (RT_nLTR_like)

2,301 - 2,566

CDD
cd01650 (RT_nLTR_like)
mobidb-lite (disord...)

2,842 - 2,876

MobiDB Lite
mobidb-lite (disorder_prediction)

504 - 634

MobiDB Lite
mobidb-lite (disorder_prediction)

2,222 - 2,241

MobiDB Lite
mobidb-lite (disorder_prediction)

1,704 - 1,745

MobiDB Lite
mobidb-lite (disorder_prediction)

1,578 - 1,691

MobiDB Lite
mobidb-lite (disorder_prediction)

2,140 - 2,172

MobiDB Lite
mobidb-lite (disorder_prediction)

1,258 - 1,304

MobiDB Lite
mobidb-lite (disorder_prediction)

1,982 - 2,019

MobiDB Lite
mobidb-lite (disorder_prediction)

1,342 - 1,376

MobiDB Lite
mobidb-lite (disorder_prediction)

436 - 484

MobiDB Lite
mobidb-lite (disorder_prediction)

1 - 205

MobiDB Lite
mobidb-lite (disorder_prediction)

Residue annotation

putative NTP bindi...

959Q

putative NTP binding site
959Q, 996D
CDD
cd01650 (RT_nLTR_like)

996D

putative NTP binding site
959Q, 996D
CDD
cd01650 (RT_nLTR_like)
putative active si...

959Q

putative active site
959Q, 960G, 994F, 996D, 997D, 1,070L, 1,071G
CDD
cd01650 (RT_nLTR_like)

960G

putative active site
959Q, 960G, 994F, 996D, 997D, 1,070L, 1,071G
CDD
cd01650 (RT_nLTR_like)

994F

putative active site
959Q, 960G, 994F, 996D, 997D, 1,070L, 1,071G
CDD
cd01650 (RT_nLTR_like)

996D

putative active site
959Q, 960G, 994F, 996D, 997D, 1,070L, 1,071G
CDD
cd01650 (RT_nLTR_like)

997D

putative active site
959Q, 960G, 994F, 996D, 997D, 1,070L, 1,071G
CDD
cd01650 (RT_nLTR_like)

1,070L

putative active site
959Q, 960G, 994F, 996D, 997D, 1,070L, 1,071G
CDD
cd01650 (RT_nLTR_like)

1,071G

putative active site
959Q, 960G, 994F, 996D, 997D, 1,070L, 1,071G
CDD
cd01650 (RT_nLTR_like)
putative nucleic a...

960G

putative nucleic acid binding site
960G
CDD
cd01650 (RT_nLTR_like)
putative NTP bindi...

2,392D

putative NTP binding site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,486D
CDD
cd01650 (RT_nLTR_like)

2,393V

putative NTP binding site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,486D
CDD
cd01650 (RT_nLTR_like)

2,394R

putative NTP binding site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,486D
CDD
cd01650 (RT_nLTR_like)

2,395N

putative NTP binding site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,486D
CDD
cd01650 (RT_nLTR_like)

2,396A

putative NTP binding site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,486D
CDD
cd01650 (RT_nLTR_like)

2,397F

putative NTP binding site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,486D
CDD
cd01650 (RT_nLTR_like)

2,451Q

putative NTP binding site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,486D
CDD
cd01650 (RT_nLTR_like)

2,486D

putative NTP binding site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,486D
CDD
cd01650 (RT_nLTR_like)
putative active si...

2,392D

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,393V

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,394R

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,395N

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,396A

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,397F

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,451Q

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,452G

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,484Y

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,486D

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,487D

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,562L

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)

2,563G

putative active site
2,392D, 2,393V, 2,394R, 2,395N, 2,396A, 2,397F, 2,451Q, 2,452G, 2,484Y, 2,486D, 2,487D, 2,562L, 2,563G
CDD
cd01650 (RT_nLTR_like)
putative nucleic a...

2,452G

putative nucleic acid binding site
2,452G
CDD
cd01650 (RT_nLTR_like)

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

KWMTBOMO09862

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component