KWMTBOMO09381

Protein

Length

130 amino acids

Protein family membership

None predicted.

Domains and repeats

Domain
6 - 122
LSM domain (IPR010920)
LSM domain, eukaryotic/archaea-type (IPR001163)

1 20 40 60 80 100 120 130

Detailed signature matches

IPR010920

LSM domain
1. SSF50182 (Sm-like r...)
  
  6 - 122
  
  SUPERFAMILY
  SSF50182 (Sm-like ribonucleoproteins)
IPR001163

LSM domain, eukaryotic/archaea-type
1. SM00651 (Sm3)
  
  8 - 73
  
  SMART
  SM00651 (Sm3)
2. PF01423 (LSM)
  
  9 - 72
  
  Pfam
  PF01423 (LSM)

no IPR

Unintegrated signatures

G3DSA:2.30.30...

5 - 84

GENE3D
G3DSA:2.30.30.100 (G3DSA:2.30.30.100)
cd01721 (Sm_D3)

6 - 75

CDD
cd01721 (Sm_D3)
mobidb-lite (disord...)

83 - 130

MobiDB Lite
mobidb-lite (disorder_prediction)

Residue annotation

Sm1 motif cd01721

18V

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

19T

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

20C

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

21E

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

22T

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

23N

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

24T

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

26E

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

27V

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

28Y

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

29R

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

30G

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

31K

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

32L

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

33I

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

34E

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

35A

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

36E

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

37D

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

38N

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

40N

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

41C

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

42Q

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

43M

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)

44T

Sm1 motif
18V, 19T, 20C, 21E, 22T, 23N, 24T, 26E, 27V, 28Y, 29R, 30G, 31K, 32L, 33I, 34E, 35A, 36E, 37D, 38N, 40N, 41C, 42Q, 43M, 44T
CDD
cd01721 (Sm_D3)
putative hexamer i...

21E

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

22T

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

23N

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

24T

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

26E

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

28Y

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

34E

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

35A

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

40N

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

42Q

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

60N

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

61V

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

62Y

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

63I

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

64R

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

65G

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

66S

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

67K

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

68I

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

69R

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)

70F

putative hexamer interface
21E, 22T, 23N, 24T, 26E, 28Y, 34E, 35A, 40N, 42Q, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F
CDD
cd01721 (Sm_D3)
heptamer interface...

26E

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

28Y

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

36E

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

39M

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

42Q

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

50Y

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

58L

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

60N

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

61V

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

62Y

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

63I

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

64R

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

65G

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

66S

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

67K

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

68I

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

69R

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

70F

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

71L

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

72I

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)

73L

heptamer interface
26E, 28Y, 36E, 39M, 42Q, 50Y, 58L, 60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L, 72I, 73L
CDD
cd01721 (Sm_D3)
RNA binding site c...

38N

RNA binding site
38N, 40N, 51R, 64R, 65G, 66S
CDD
cd01721 (Sm_D3)

40N

RNA binding site
38N, 40N, 51R, 64R, 65G, 66S
CDD
cd01721 (Sm_D3)

51R

RNA binding site
38N, 40N, 51R, 64R, 65G, 66S
CDD
cd01721 (Sm_D3)

64R

RNA binding site
38N, 40N, 51R, 64R, 65G, 66S
CDD
cd01721 (Sm_D3)

65G

RNA binding site
38N, 40N, 51R, 64R, 65G, 66S
CDD
cd01721 (Sm_D3)

66S

RNA binding site
38N, 40N, 51R, 64R, 65G, 66S
CDD
cd01721 (Sm_D3)
Sm2 motif cd01721

60N

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

61V

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

62Y

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

63I

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

64R

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

65G

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

66S

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

67K

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

68I

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

69R

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

70F

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

71L

Sm2 motif
60N, 61V, 62Y, 63I, 64R, 65G, 66S, 67K, 68I, 69R, 70F, 71L
CDD
cd01721 (Sm_D3)

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

KWMTBOMO09381

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component