KWMTBOMO09307

Protein

Length

405 amino acids

Protein family membership

Transcription initiation factor IIF, alpha subunit (IPR008851)

Domains and repeats

Domain
13 - 172
Transcription Factor IIF, Rap30/Rap74, interaction (IPR011039)

1 50 100 150 200 250 300 350 405

Detailed signature matches

IPR008851

Transcription initiation factor IIF, alpha subunit
1. PF05793 (TFIIF_alpha)
  
  7 - 397
  
  Pfam
  PF05793 (TFIIF_alpha)
IPR011039

Transcription Factor IIF, Rap30/Rap74, interaction
1. SSF50916 (Rap30/74 ...)
  
  13 - 172
  
  SUPERFAMILY
  SSF50916 (Rap30/74 interaction domains)

no IPR

Unintegrated signatures

cd00240 (TFIIFa)

15 - 176

CDD
cd00240 (TFIIFa)
mobidb-lite (disord...)

189 - 405

MobiDB Lite
mobidb-lite (disorder_prediction)

Residue annotation

transcription init...

57K

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

58E

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

59F

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

60K

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

61G

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

62A

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

63E

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

64E

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

70G

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

71A

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

72G

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

73S

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

74E

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

75Y

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

76G

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

77R

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

78D

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

80R

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

81E

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

82E

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

83A

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

84R

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

85R

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

86K

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

87K

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

88F

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

89G

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

90I

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

91I

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

92S

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

93R

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

94K

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

95Y

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

96K

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

159L

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

160S

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

161A

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

162E

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

163E

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

164A

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

165E

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

166Q

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

167E

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

168F

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

169G

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

170R

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

171R

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

172N

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

173K

transcription initiation complex contacts
57K, 58E, 59F, 60K, 61G, 62A, 63E, 64E, 70G, 71A, 72G, 73S, 74E, 75Y, 76G, 77R, 78D, 80R, 81E, 82E, 83A, 84R, 85R, 86K, 87K, 88F, 89G, 90I, 91I, 92S, 93R, 94K, 95Y, 96K, 159L, 160S, 161A, 162E, 163E, 164A, 165E, 166Q, 167E, 168F, 169G, 170R, 171R, 172N, 173K
CDD
cd00240 (TFIIFa)

GO term prediction

Biological Process

GO:0006367 transcription initiation from RNA polymerase II promoter
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter

Molecular Function

GO:0003677 DNA binding
GO:0003824 catalytic activity

Cellular Component

GO:0005634 nucleus

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Entry type

Status

Per-residue features