KWMTBOMO06517

Protein

Length

3,277 amino acids

Protein family membership

Protein of unknown function DUF1759 (IPR005312)

Retrotransposon, Pao (IPR008042)

Domains and repeats

Domain
162 - 232
Pre-C2HC domain (IPR006579)
234 - 247
Zinc finger, CCHC-type (IPR001878)
430 - 642
Endonuclease/exonuclease/phosphatase (IPR005135)
905 - 1,191
Reverse transcriptase domain (IPR000477)
2,954 - 3,138
Ribonuclease H-like domain (IPR012337)
Integrase, catalytic core (IPR001584)

1 500 1000 1500 2000 2500 3000 3277

Detailed signature matches

IPR005312

Protein of unknown function DUF1759
1. PF03564 (DUF1759)
  
  1,684 - 1,820
  
  Pfam
  PF03564 (DUF1759)
IPR008042

Retrotransposon, Pao
1. PF05380 (Peptidase_A17)
  
  2,464 - 2,625
  
  Pfam
  PF05380 (Peptidase_A17)
IPR006579

Pre-C2HC domain
1. PF07530 (PRE_C2HC)
  
  165 - 231
  
  Pfam
  PF07530 (PRE_C2HC)
2. SM00596 (115neu5)
  
  162 - 232
  
  SMART
  SM00596 (115neu5)
IPR001878

Zinc finger, CCHC-type
1. PS50158 (ZF_CCHC)
  
  234 - 247
  
  PROSITE profiles
  PS50158 (ZF_CCHC)
IPR005135

Endonuclease/exonuclease/phosphatase
1. G3DSA:3.60.10.10
  
  431 - 642
  
  GENE3D
  G3DSA:3.60.10.10 (G3DSA:3.60.10.10)
2. PF14529 (Exo_endo_p...)
  
  525 - 637
  
  Pfam
  PF14529 (Exo_endo_phos_2)
3. SSF56219 (DNase I-like)
  
  430 - 642
  
  SUPERFAMILY
  SSF56219 (DNase I-like)
IPR000477

Reverse transcriptase domain
1. PF00078 (RVT_1)
  
  924 - 1,191
  
  Pfam
  PF00078 (RVT_1)
2. PS50878 (RT_POL)
  
  905 - 1,191
  
  PROSITE profiles
  PS50878 (RT_POL)
IPR012337

Ribonuclease H-like domain
1. G3DSA:3.30.42...
  
  2,954 - 3,117
  
  GENE3D
  G3DSA:3.30.420.10 (G3DSA:3.30.420.10)
2. SSF53098 (Ribonucle...)
  
  2,955 - 3,118
  
  SUPERFAMILY
  SSF53098 (Ribonuclease H-like)
IPR001584

Integrase, catalytic core
1. PS50994 (INTEGRASE)
  
  2,956 - 3,138
  
  PROSITE profiles
  PS50994 (INTEGRASE)
2. PF00665 (rve)
  
  2,958 - 3,083
  
  Pfam
  PF00665 (rve)

no IPR

Unintegrated signatures

Coil

3,034 - 3,054

COILS
Coil (Coil)

1,535 - 1,586

COILS
Coil (Coil)
SSF56672 (DNA/RNA p...)

819 - 1,146

SUPERFAMILY
SSF56672 (DNA/RNA polymerases)

2,195 - 2,652

SUPERFAMILY
SSF56672 (DNA/RNA polymerases)
cd01644 (RT_pepA17)

2,227 - 2,442

CDD
cd01644 (RT_pepA17)
cd01650 (RT_nLTR_like)

921 - 1,191

CDD
cd01650 (RT_nLTR_like)
mobidb-lite (disord...)

1,569 - 1,590

MobiDB Lite
mobidb-lite (disorder_prediction)

293 - 320

MobiDB Lite
mobidb-lite (disorder_prediction)

2,765 - 2,795

MobiDB Lite
mobidb-lite (disorder_prediction)

340 - 361

MobiDB Lite
mobidb-lite (disorder_prediction)

3,258 - 3,277

MobiDB Lite
mobidb-lite (disorder_prediction)

1,340 - 1,530

MobiDB Lite
mobidb-lite (disorder_prediction)

1 - 78

MobiDB Lite
mobidb-lite (disorder_prediction)

Residue annotation

putative NTP bindi...

1,010D

putative NTP binding site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,098D
CDD
cd01650 (RT_nLTR_like)

1,011I

putative NTP binding site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,098D
CDD
cd01650 (RT_nLTR_like)

1,012A

putative NTP binding site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,098D
CDD
cd01650 (RT_nLTR_like)

1,013K

putative NTP binding site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,098D
CDD
cd01650 (RT_nLTR_like)

1,014A

putative NTP binding site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,098D
CDD
cd01650 (RT_nLTR_like)

1,015F

putative NTP binding site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,098D
CDD
cd01650 (RT_nLTR_like)

1,069Q

putative NTP binding site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,098D
CDD
cd01650 (RT_nLTR_like)

1,098D

putative NTP binding site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,098D
CDD
cd01650 (RT_nLTR_like)
putative active si...

1,010D

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,011I

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,012A

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,013K

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,014A

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,015F

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,069Q

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,070G

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,096F

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,098D

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,099D

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,187L

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)

1,188G

putative active site
1,010D, 1,011I, 1,012A, 1,013K, 1,014A, 1,015F, 1,069Q, 1,070G, 1,096F, 1,098D, 1,099D, 1,187L, 1,188G
CDD
cd01650 (RT_nLTR_like)
putative nucleic a...

1,070G

putative nucleic acid binding site
1,070G
CDD
cd01650 (RT_nLTR_like)
putative NTP bindi...

2,290D

putative NTP binding site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,368D
CDD
cd01644 (RT_pepA17)

2,291I

putative NTP binding site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,368D
CDD
cd01644 (RT_pepA17)

2,292T

putative NTP binding site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,368D
CDD
cd01644 (RT_pepA17)

2,293E

putative NTP binding site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,368D
CDD
cd01644 (RT_pepA17)

2,294M

putative NTP binding site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,368D
CDD
cd01644 (RT_pepA17)

2,295F

putative NTP binding site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,368D
CDD
cd01644 (RT_pepA17)

2,330F

putative NTP binding site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,368D
CDD
cd01644 (RT_pepA17)

2,368D

putative NTP binding site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,368D
CDD
cd01644 (RT_pepA17)
putative active si...

2,290D

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,291I

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,292T

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,293E

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,294M

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,295F

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,330F

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,331G

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,366Y

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,368D

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,369D

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,433L

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)

2,434G

putative active site
2,290D, 2,291I, 2,292T, 2,293E, 2,294M, 2,295F, 2,330F, 2,331G, 2,366Y, 2,368D, 2,369D, 2,433L, 2,434G
CDD
cd01644 (RT_pepA17)
putative nucleic a...

2,331G

putative nucleic acid binding site
2,331G
CDD
cd01644 (RT_pepA17)

GO term prediction

Biological Process

GO:0015074 DNA integration

Molecular Function

GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding

Cellular Component

None predicted.

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Entry type

Status

Per-residue features

KWMTBOMO06517

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component