KWMTBOMO06306

Protein

Length

1,948 amino acids

Protein family membership

None predicted.

Domains and repeats

Domain
252 - 529
Reverse transcriptase domain (IPR000477)
777 - 805
Zinc finger, C2H2 (IPR007087)
1,072 - 1,333
Reverse transcriptase domain (IPR000477)

1 200 400 600 800 1000 1200 1400 1600 1800 1948

Detailed signature matches

IPR000477

Reverse transcriptase domain
1. PF00078 (RVT_1)
  
  1,095 - 1,321
  
  Pfam
  PF00078 (RVT_1)
  
  275 - 528
  
  Pfam
  PF00078 (RVT_1)
2. PS50878 (RT_POL)
  
  1,072 - 1,333
  
  PROSITE profiles
  PS50878 (RT_POL)
  
  252 - 529
  
  PROSITE profiles
  PS50878 (RT_POL)
IPR007087

Zinc finger, C2H2
1. PS50157 (ZINC_FINGE...)
  
  777 - 805
  
  PROSITE profiles
  PS50157 (ZINC_FINGER_C2H2_2)
2. PS00028 (ZINC_FINGE...)
  
  779 - 800
  
  PROSITE patterns
  PS00028 (ZINC_FINGER_C2H2_1)

no IPR

Unintegrated signatures

SSF56672 (DNA/RNA p...)

554 - 572

SUPERFAMILY
SSF56672 (DNA/RNA polymerases)

177 - 526

SUPERFAMILY
SSF56672 (DNA/RNA polymerases)

1,057 - 1,382

SUPERFAMILY
SSF56672 (DNA/RNA polymerases)
cd01650 (RT_nLTR_like)

1,086 - 1,318

CDD
cd01650 (RT_nLTR_like)

266 - 529

CDD
cd01650 (RT_nLTR_like)
mobidb-lite (disord...)

139 - 166

MobiDB Lite
mobidb-lite (disorder_prediction)

65 - 111

MobiDB Lite
mobidb-lite (disorder_prediction)

731 - 772

MobiDB Lite
mobidb-lite (disorder_prediction)

1,457 - 1,487

MobiDB Lite
mobidb-lite (disorder_prediction)

1,730 - 1,774

MobiDB Lite
mobidb-lite (disorder_prediction)

1,805 - 1,824

MobiDB Lite
mobidb-lite (disorder_prediction)

877 - 912

MobiDB Lite
mobidb-lite (disorder_prediction)

1,920 - 1,948

MobiDB Lite
mobidb-lite (disorder_prediction)

943 - 977

MobiDB Lite
mobidb-lite (disorder_prediction)

Residue annotation

putative NTP bindi...

350D

putative NTP binding site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 449D
CDD
cd01650 (RT_nLTR_like)

351F

putative NTP binding site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 449D
CDD
cd01650 (RT_nLTR_like)

352A

putative NTP binding site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 449D
CDD
cd01650 (RT_nLTR_like)

353K

putative NTP binding site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 449D
CDD
cd01650 (RT_nLTR_like)

354A

putative NTP binding site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 449D
CDD
cd01650 (RT_nLTR_like)

355F

putative NTP binding site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 449D
CDD
cd01650 (RT_nLTR_like)

409Q

putative NTP binding site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 449D
CDD
cd01650 (RT_nLTR_like)

449D

putative NTP binding site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 449D
CDD
cd01650 (RT_nLTR_like)
putative active si...

350D

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

351F

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

352A

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

353K

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

354A

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

355F

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

409Q

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

410G

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

447Y

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

449D

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

450D

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

525L

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)

526G

putative active site
350D, 351F, 352A, 353K, 354A, 355F, 409Q, 410G, 447Y, 449D, 450D, 525L, 526G
CDD
cd01650 (RT_nLTR_like)
putative nucleic a...

410G

putative nucleic acid binding site
410G
CDD
cd01650 (RT_nLTR_like)
putative NTP bindi...

1,170D

putative NTP binding site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,269D
CDD
cd01650 (RT_nLTR_like)

1,171F

putative NTP binding site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,269D
CDD
cd01650 (RT_nLTR_like)

1,172A

putative NTP binding site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,269D
CDD
cd01650 (RT_nLTR_like)

1,173K

putative NTP binding site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,269D
CDD
cd01650 (RT_nLTR_like)

1,174A

putative NTP binding site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,269D
CDD
cd01650 (RT_nLTR_like)

1,175F

putative NTP binding site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,269D
CDD
cd01650 (RT_nLTR_like)

1,229Q

putative NTP binding site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,269D
CDD
cd01650 (RT_nLTR_like)

1,269D

putative NTP binding site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,269D
CDD
cd01650 (RT_nLTR_like)
putative active si...

1,170D

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)

1,171F

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)

1,172A

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)

1,173K

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)

1,174A

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)

1,175F

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)

1,229Q

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)

1,230G

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)

1,267Y

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)

1,269D

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)

1,270D

putative active site
1,170D, 1,171F, 1,172A, 1,173K, 1,174A, 1,175F, 1,229Q, 1,230G, 1,267Y, 1,269D, 1,270D
CDD
cd01650 (RT_nLTR_like)
putative nucleic a...

1,230G

putative nucleic acid binding site
1,230G
CDD
cd01650 (RT_nLTR_like)

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0046872 metal ion binding

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

KWMTBOMO06306

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component