KWMTBOMO04505

Protein

Length

1,169 amino acids

Protein family membership

DNA repair protein Rad50, eukaryotes (IPR004584)

Domains and repeats

Domain
504 - 601
RAD50, zinc hook (IPR013134)
983 - 1,141
P-loop containing nucleoside triphosphate hydrolase (IPR027417)

1 200 400 600 800 1000 1169

Detailed signature matches

IPR004584

DNA repair protein Rad50, eukaryotes
1. TIGR00606
  
  8 - 1,164
  
  TIGRFAMs
  TIGR00606 (TIGR00606)
IPR013134

RAD50, zinc hook
1. PS51131 (ZN_HOOK)
  
  504 - 601
  
  PROSITE profiles
  PS51131 (ZN_HOOK)
IPR027417

P-loop containing nucleoside triphosphate hydrolase
1. SSF52540 (P-loop co...)
  
  983 - 1,140
  
  SUPERFAMILY
  SSF52540 (P-loop containing nucleoside triphosphate hydrolases)
2. G3DSA:3.40.50...
  
  1,000 - 1,141
  
  GENE3D
  G3DSA:3.40.50.300 (G3DSA:3.40.50.300)

no IPR

Unintegrated signatures

Coil

579 - 599

COILS
Coil (Coil)

118 - 166

COILS
Coil (Coil)

168 - 188

COILS
Coil (Coil)

868 - 888

COILS
Coil (Coil)

891 - 918

COILS
Coil (Coil)

256 - 290

COILS
Coil (Coil)

751 - 785

COILS
Coil (Coil)

456 - 483

COILS
Coil (Coil)

706 - 747

COILS
Coil (Coil)

94 - 114

COILS
Coil (Coil)

814 - 834

COILS
Coil (Coil)

309 - 424

COILS
Coil (Coil)

614 - 634

COILS
Coil (Coil)

944 - 964

COILS
Coil (Coil)

836 - 860

COILS
Coil (Coil)

56 - 90

COILS
Coil (Coil)

662 - 682

COILS
Coil (Coil)
G3DSA:1.10.28...

512 - 598

GENE3D
G3DSA:1.10.287.510 (G3DSA:1.10.287.510)
cd03240 (ABC_Rad50)

1,060 - 1,162

CDD
cd03240 (ABC_Rad50)

Residue annotation

ABC transporter si...

1,065C

ABC transporter signature motif
1,065C, 1,066S, 1,067A, 1,068G, 1,069Q, 1,070K, 1,071V, 1,072L, 1,073A, 1,074C
CDD
cd03240 (ABC_Rad50)

1,066S

ABC transporter signature motif
1,065C, 1,066S, 1,067A, 1,068G, 1,069Q, 1,070K, 1,071V, 1,072L, 1,073A, 1,074C
CDD
cd03240 (ABC_Rad50)

1,067A

ABC transporter signature motif
1,065C, 1,066S, 1,067A, 1,068G, 1,069Q, 1,070K, 1,071V, 1,072L, 1,073A, 1,074C
CDD
cd03240 (ABC_Rad50)

1,068G

ABC transporter signature motif
1,065C, 1,066S, 1,067A, 1,068G, 1,069Q, 1,070K, 1,071V, 1,072L, 1,073A, 1,074C
CDD
cd03240 (ABC_Rad50)

1,069Q

ABC transporter signature motif
1,065C, 1,066S, 1,067A, 1,068G, 1,069Q, 1,070K, 1,071V, 1,072L, 1,073A, 1,074C
CDD
cd03240 (ABC_Rad50)

1,070K

ABC transporter signature motif
1,065C, 1,066S, 1,067A, 1,068G, 1,069Q, 1,070K, 1,071V, 1,072L, 1,073A, 1,074C
CDD
cd03240 (ABC_Rad50)

1,071V

ABC transporter signature motif
1,065C, 1,066S, 1,067A, 1,068G, 1,069Q, 1,070K, 1,071V, 1,072L, 1,073A, 1,074C
CDD
cd03240 (ABC_Rad50)

1,072L

ABC transporter signature motif
1,065C, 1,066S, 1,067A, 1,068G, 1,069Q, 1,070K, 1,071V, 1,072L, 1,073A, 1,074C
CDD
cd03240 (ABC_Rad50)

1,073A

ABC transporter signature motif
1,065C, 1,066S, 1,067A, 1,068G, 1,069Q, 1,070K, 1,071V, 1,072L, 1,073A, 1,074C
CDD
cd03240 (ABC_Rad50)

1,074C

ABC transporter signature motif
1,065C, 1,066S, 1,067A, 1,068G, 1,069Q, 1,070K, 1,071V, 1,072L, 1,073A, 1,074C
CDD
cd03240 (ABC_Rad50)
Walker B cd03240

1,091I

Walker B
1,091I, 1,092L, 1,093A, 1,094L, 1,095D, 1,096E
CDD
cd03240 (ABC_Rad50)

1,092L

Walker B
1,091I, 1,092L, 1,093A, 1,094L, 1,095D, 1,096E
CDD
cd03240 (ABC_Rad50)

1,093A

Walker B
1,091I, 1,092L, 1,093A, 1,094L, 1,095D, 1,096E
CDD
cd03240 (ABC_Rad50)

1,094L

Walker B
1,091I, 1,092L, 1,093A, 1,094L, 1,095D, 1,096E
CDD
cd03240 (ABC_Rad50)

1,095D

Walker B
1,091I, 1,092L, 1,093A, 1,094L, 1,095D, 1,096E
CDD
cd03240 (ABC_Rad50)

1,096E

Walker B
1,091I, 1,092L, 1,093A, 1,094L, 1,095D, 1,096E
CDD
cd03240 (ABC_Rad50)
ATP binding site c...

1,095D

ATP binding site
1,095D, 1,096E, 1,133H
CDD
cd03240 (ABC_Rad50)

1,096E

ATP binding site
1,095D, 1,096E, 1,133H
CDD
cd03240 (ABC_Rad50)

1,133H

ATP binding site
1,095D, 1,096E, 1,133H
CDD
cd03240 (ABC_Rad50)
D-loop cd03240

1,099T

D-loop
1,099T, 1,100N, 1,101L, 1,102D
CDD
cd03240 (ABC_Rad50)

1,100N

D-loop
1,099T, 1,100N, 1,101L, 1,102D
CDD
cd03240 (ABC_Rad50)

1,101L

D-loop
1,099T, 1,100N, 1,101L, 1,102D
CDD
cd03240 (ABC_Rad50)

1,102D

D-loop
1,099T, 1,100N, 1,101L, 1,102D
CDD
cd03240 (ABC_Rad50)
H-loop/switch regi...

1,129I

H-loop/switch region
1,129I, 1,130I, 1,131I, 1,132T, 1,133H, 1,134D, 1,135K
CDD
cd03240 (ABC_Rad50)

1,130I

H-loop/switch region
1,129I, 1,130I, 1,131I, 1,132T, 1,133H, 1,134D, 1,135K
CDD
cd03240 (ABC_Rad50)

1,131I

H-loop/switch region
1,129I, 1,130I, 1,131I, 1,132T, 1,133H, 1,134D, 1,135K
CDD
cd03240 (ABC_Rad50)

1,132T

H-loop/switch region
1,129I, 1,130I, 1,131I, 1,132T, 1,133H, 1,134D, 1,135K
CDD
cd03240 (ABC_Rad50)

1,133H

H-loop/switch region
1,129I, 1,130I, 1,131I, 1,132T, 1,133H, 1,134D, 1,135K
CDD
cd03240 (ABC_Rad50)

1,134D

H-loop/switch region
1,129I, 1,130I, 1,131I, 1,132T, 1,133H, 1,134D, 1,135K
CDD
cd03240 (ABC_Rad50)

1,135K

H-loop/switch region
1,129I, 1,130I, 1,131I, 1,132T, 1,133H, 1,134D, 1,135K
CDD
cd03240 (ABC_Rad50)

GO term prediction

Biological Process

GO:0000723 telomere maintenance
GO:0006281 DNA repair

Molecular Function

GO:0016887 ATPase activity

Cellular Component

GO:0005634 nucleus
GO:0030870 Mre11 complex

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Entry type

Status

Per-residue features