KWMTBOMO03402

Protein

Length

339 amino acids

Protein family membership

LIM and senescent cell antigen-like-containing domain protein 1 (IPR017351)

Domains and repeats

Domain
11 - 74
Zinc finger, LIM-type (IPR001781)
74 - 132
Zinc finger, LIM-type (IPR001781)
132 - 199
Zinc finger, LIM-type (IPR001781)
197 - 264
Zinc finger, LIM-type (IPR001781)
265 - 324
Zinc finger, LIM-type (IPR001781)

1 50 100 150 200 250 300 339

Detailed signature matches

IPR017351

LIM and senescent cell antigen-like-containing domain protein 1
1. PIRSF038003 (PINCH)
  
  3 - 339
  
  PIRSF
  PIRSF038003 (PINCH)
IPR001781

Zinc finger, LIM-type
1. SM00132 (lim_4)
  
  265 - 317
  
  SMART
  SM00132 (lim_4)
  
  206 - 257
  
  SMART
  SM00132 (lim_4)
  
  13 - 66
  
  SMART
  SM00132 (lim_4)
  
  138 - 198
  
  SMART
  SM00132 (lim_4)
  
  74 - 125
  
  SMART
  SM00132 (lim_4)
2. PS50023 (LIM_DOMAIN_2)
  
  137 - 196
  
  PROSITE profiles
  PS50023 (LIM_DOMAIN_2)
  
  205 - 264
  
  PROSITE profiles
  PS50023 (LIM_DOMAIN_2)
  
  75 - 132
  
  PROSITE profiles
  PS50023 (LIM_DOMAIN_2)
  
  265 - 324
  
  PROSITE profiles
  PS50023 (LIM_DOMAIN_2)
  
  12 - 73
  
  PROSITE profiles
  PS50023 (LIM_DOMAIN_2)
3. G3DSA:2.10.11...
  
  265 - 324
  
  GENE3D
  G3DSA:2.10.110.10 (G3DSA:2.10.110.10)
  
  132 - 196
  
  GENE3D
  G3DSA:2.10.110.10 (G3DSA:2.10.110.10)
  
  197 - 264
  
  GENE3D
  G3DSA:2.10.110.10 (G3DSA:2.10.110.10)
  
  75 - 129
  
  GENE3D
  G3DSA:2.10.110.10 (G3DSA:2.10.110.10)
  
  11 - 74
  
  GENE3D
  G3DSA:2.10.110.10 (G3DSA:2.10.110.10)
4. PS00478 (LIM_DOMAIN_1)
  
  75 - 108
  
  PROSITE patterns
  PS00478 (LIM_DOMAIN_1)
  
  207 - 240
  
  PROSITE patterns
  PS00478 (LIM_DOMAIN_1)
  
  14 - 49
  
  PROSITE patterns
  PS00478 (LIM_DOMAIN_1)
  
  139 - 172
  
  PROSITE patterns
  PS00478 (LIM_DOMAIN_1)
5. PF00412 (LIM)
  
  75 - 126
  
  Pfam
  PF00412 (LIM)
  
  266 - 320
  
  Pfam
  PF00412 (LIM)
  
  207 - 261
  
  Pfam
  PF00412 (LIM)
  
  14 - 68
  
  Pfam
  PF00412 (LIM)
  
  139 - 199
  
  Pfam
  PF00412 (LIM)

no IPR

Unintegrated signatures

SSF57716 (Glucocort...)

191 - 236

SUPERFAMILY
SSF57716 (Glucocorticoid receptor-like (DNA-binding domain))

6 - 39

SUPERFAMILY
SSF57716 (Glucocorticoid receptor-like (DNA-binding domain))

130 - 163

SUPERFAMILY
SSF57716 (Glucocorticoid receptor-like (DNA-binding domain))

100 - 130

SUPERFAMILY
SSF57716 (Glucocorticoid receptor-like (DNA-binding domain))

42 - 105

SUPERFAMILY
SSF57716 (Glucocorticoid receptor-like (DNA-binding domain))

233 - 296

SUPERFAMILY
SSF57716 (Glucocorticoid receptor-like (DNA-binding domain))
cd09331 (LIM1_PINCH)

14 - 72

CDD
cd09331 (LIM1_PINCH)
cd09332 (LIM2_PINCH)

75 - 126

CDD
cd09332 (LIM2_PINCH)
cd09334 (LIM4_PINCH)

205 - 258

CDD
cd09334 (LIM4_PINCH)
cd09335 (LIM5_PINCH)

266 - 319

CDD
cd09335 (LIM5_PINCH)

Residue annotation

Zn binding site cd...

14C

Zn binding site
14C, 17C, 36H, 39C, 42C, 45C, 63C, 66D
CDD
cd09331 (LIM1_PINCH)

17C

Zn binding site
14C, 17C, 36H, 39C, 42C, 45C, 63C, 66D
CDD
cd09331 (LIM1_PINCH)

36H

Zn binding site
14C, 17C, 36H, 39C, 42C, 45C, 63C, 66D
CDD
cd09331 (LIM1_PINCH)

39C

Zn binding site
14C, 17C, 36H, 39C, 42C, 45C, 63C, 66D
CDD
cd09331 (LIM1_PINCH)

42C

Zn binding site
14C, 17C, 36H, 39C, 42C, 45C, 63C, 66D
CDD
cd09331 (LIM1_PINCH)

45C

Zn binding site
14C, 17C, 36H, 39C, 42C, 45C, 63C, 66D
CDD
cd09331 (LIM1_PINCH)

63C

Zn binding site
14C, 17C, 36H, 39C, 42C, 45C, 63C, 66D
CDD
cd09331 (LIM1_PINCH)

66D

Zn binding site
14C, 17C, 36H, 39C, 42C, 45C, 63C, 66D
CDD
cd09331 (LIM1_PINCH)
ILK binding interf...

16R

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

17C

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

19D

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

41V

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

43A

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

44Q

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

45C

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

46F

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

47R

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

57F

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

58E

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

60R

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

65Q

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

66D

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

68Q

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

69V

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

70L

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

71F

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)

72A

ILK binding interface
16R, 17C, 19D, 41V, 43A, 44Q, 45C, 46F, 47R, 57F, 58E, 60R, 65Q, 66D, 68Q, 69V, 70L, 71F, 72A
CDD
cd09331 (LIM1_PINCH)
Zn binding site cd...

75C

Zn binding site
75C, 78C, 95H, 98C, 101C, 104C, 122C, 125C
CDD
cd09332 (LIM2_PINCH)

78C

Zn binding site
75C, 78C, 95H, 98C, 101C, 104C, 122C, 125C
CDD
cd09332 (LIM2_PINCH)

95H

Zn binding site
75C, 78C, 95H, 98C, 101C, 104C, 122C, 125C
CDD
cd09332 (LIM2_PINCH)

98C

Zn binding site
75C, 78C, 95H, 98C, 101C, 104C, 122C, 125C
CDD
cd09332 (LIM2_PINCH)

101C

Zn binding site
75C, 78C, 95H, 98C, 101C, 104C, 122C, 125C
CDD
cd09332 (LIM2_PINCH)

104C

Zn binding site
75C, 78C, 95H, 98C, 101C, 104C, 122C, 125C
CDD
cd09332 (LIM2_PINCH)

122C

Zn binding site
75C, 78C, 95H, 98C, 101C, 104C, 122C, 125C
CDD
cd09332 (LIM2_PINCH)

125C

Zn binding site
75C, 78C, 95H, 98C, 101C, 104C, 122C, 125C
CDD
cd09332 (LIM2_PINCH)
N(i)ck binding int...

206I

N(i)ck binding interface
206I, 210C, 211R, 212R, 213P
CDD
cd09334 (LIM4_PINCH)

210C

N(i)ck binding interface
206I, 210C, 211R, 212R, 213P
CDD
cd09334 (LIM4_PINCH)

211R

N(i)ck binding interface
206I, 210C, 211R, 212R, 213P
CDD
cd09334 (LIM4_PINCH)

212R

N(i)ck binding interface
206I, 210C, 211R, 212R, 213P
CDD
cd09334 (LIM4_PINCH)

213P

N(i)ck binding interface
206I, 210C, 211R, 212R, 213P
CDD
cd09334 (LIM4_PINCH)
Zn binding site cd...

207C

Zn binding site
207C, 210C, 227H, 230H, 233C, 236C, 254C, 257H
CDD
cd09334 (LIM4_PINCH)

210C

Zn binding site
207C, 210C, 227H, 230H, 233C, 236C, 254C, 257H
CDD
cd09334 (LIM4_PINCH)

227H

Zn binding site
207C, 210C, 227H, 230H, 233C, 236C, 254C, 257H
CDD
cd09334 (LIM4_PINCH)

230H

Zn binding site
207C, 210C, 227H, 230H, 233C, 236C, 254C, 257H
CDD
cd09334 (LIM4_PINCH)

233C

Zn binding site
207C, 210C, 227H, 230H, 233C, 236C, 254C, 257H
CDD
cd09334 (LIM4_PINCH)

236C

Zn binding site
207C, 210C, 227H, 230H, 233C, 236C, 254C, 257H
CDD
cd09334 (LIM4_PINCH)

254C

Zn binding site
207C, 210C, 227H, 230H, 233C, 236C, 254C, 257H
CDD
cd09334 (LIM4_PINCH)

257H

Zn binding site
207C, 210C, 227H, 230H, 233C, 236C, 254C, 257H
CDD
cd09334 (LIM4_PINCH)
Zn binding site cd...

266C

Zn binding site
266C, 269C, 286C, 289H, 292C, 295C, 314C, 317C
CDD
cd09335 (LIM5_PINCH)

269C

Zn binding site
266C, 269C, 286C, 289H, 292C, 295C, 314C, 317C
CDD
cd09335 (LIM5_PINCH)

286C

Zn binding site
266C, 269C, 286C, 289H, 292C, 295C, 314C, 317C
CDD
cd09335 (LIM5_PINCH)

289H

Zn binding site
266C, 269C, 286C, 289H, 292C, 295C, 314C, 317C
CDD
cd09335 (LIM5_PINCH)

292C

Zn binding site
266C, 269C, 286C, 289H, 292C, 295C, 314C, 317C
CDD
cd09335 (LIM5_PINCH)

295C

Zn binding site
266C, 269C, 286C, 289H, 292C, 295C, 314C, 317C
CDD
cd09335 (LIM5_PINCH)

314C

Zn binding site
266C, 269C, 286C, 289H, 292C, 295C, 314C, 317C
CDD
cd09335 (LIM5_PINCH)

317C

Zn binding site
266C, 269C, 286C, 289H, 292C, 295C, 314C, 317C
CDD
cd09335 (LIM5_PINCH)

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0008270 zinc ion binding

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

KWMTBOMO03402

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component