KWMTBOMO02584

Protein

Length

310 amino acids

Protein family membership

None predicted.

Domains and repeats

Domain
2 - 171
Ribosomal protein S5 domain 2-type fold (IPR020568)
Exoribonuclease, phosphorolytic domain 1 (IPR001247)
206 - 221
Ribosomal protein S5 domain 2-type fold (IPR020568)
Domain
192 - 293
Exoribonuclease, phosphorolytic domain 2 (IPR015847)

1 50 100 150 200 250 310

Detailed signature matches

IPR020568

Ribosomal protein S5 domain 2-type fold
1. SSF54211 (Ribosomal...)
  
  206 - 221
  
  SUPERFAMILY
  SSF54211 (Ribosomal protein S5 domain 2-like)
  
  2 - 171
  
  SUPERFAMILY
  SSF54211 (Ribosomal protein S5 domain 2-like)
IPR001247

Exoribonuclease, phosphorolytic domain 1
1. PF01138 (RNase_PH)
  
  32 - 166
  
  Pfam
  PF01138 (RNase_PH)
IPR015847

Exoribonuclease, phosphorolytic domain 2
1. PF03725 (RNase_PH_C)
  
  197 - 276
  
  Pfam
  PF03725 (RNase_PH_C)
2. SSF55666 (Ribonucle...)
  
  192 - 293
  
  SUPERFAMILY
  SSF55666 (Ribonuclease PH domain 2-like)

no IPR

Unintegrated signatures

cd11367 (RNase_PH_R...)

5 - 291

CDD
cd11367 (RNase_PH_RRP42)

Residue annotation

Rrp4 interface cd1...

5L

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

6L

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

7S

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

8S

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

9T

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

10E

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

12V

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

13F

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

16H

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

17G

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

20E

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

22F

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

24S

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

25D

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

26G

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

27R

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

34P

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

55N

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)

217E

Rrp4 interface
5L, 6L, 7S, 8S, 9T, 10E, 12V, 13F, 16H, 17G, 20E, 22F, 24S, 25D, 26G, 27R, 34P, 55N, 217E
CDD
cd11367 (RNase_PH_RRP42)
hexamer interface ...

43S

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

44H

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

45A

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

50R

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

57D

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

61G

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

63K

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

82F

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

87A

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

88N

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

103S

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

111R

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

136Y

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

138D

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

142L

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

143E

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

230I

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

234S

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

235K

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

236S

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

253C

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

254S

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

255T

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

256I

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

257S

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

258M

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

259N

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

260G

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

262G

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

263S

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

264L

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

269L

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

270K

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

273I

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

274H

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

276G

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

277I

hexamer interface
43S, 44H, 45A, 50R, 57D, 61G, 63K, 82F, 87A, 88N, 103S, 111R, 136Y, 138D, 142L, 143E, 230I, 234S, 235K, 236S, 253C, 254S, 255T, 256I, 257S, 258M, 259N, 260G, 262G, 263S, 264L, 269L, 270K, 273I, 274H, 276G, 277I
CDD
cd11367 (RNase_PH_RRP42)

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

KWMTBOMO02584

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component