KWMTBOMO01242

Protein

Length

1,837 amino acids

Protein family membership

None predicted.

Domains and repeats

Domain
675 - 720
Zinc finger, CCHC-type (IPR001878)
774 - 972
Endonuclease/exonuclease/phosphatase (IPR005135)
1,250 - 1,528
Reverse transcriptase domain (IPR000477)

1 200 400 600 800 1000 1200 1400 1600 1837

Detailed signature matches

IPR001878

Zinc finger, CCHC-type
1. PS50158 (ZF_CCHC)
  
  705 - 718
  
  PROSITE profiles
  PS50158 (ZF_CCHC)
2. G3DSA:4.10.60.10
  
  675 - 720
  
  GENE3D
  G3DSA:4.10.60.10 (G3DSA:4.10.60.10)
3. SM00343 (c2hcfinal6)
  
  681 - 697
  
  SMART
  SM00343 (c2hcfinal6)
  
  704 - 720
  
  SMART
  SM00343 (c2hcfinal6)
4. SSF57756 (Retroviru...)
  
  677 - 720
  
  SUPERFAMILY
  SSF57756 (Retrovirus zinc finger-like domains)
IPR005135

Endonuclease/exonuclease/phosphatase
1. PF14529 (Exo_endo_p...)
  
  847 - 966
  
  Pfam
  PF14529 (Exo_endo_phos_2)
2. G3DSA:3.60.10.10
  
  774 - 971
  
  GENE3D
  G3DSA:3.60.10.10 (G3DSA:3.60.10.10)
3. SSF56219 (DNase I-like)
  
  774 - 972
  
  SUPERFAMILY
  SSF56219 (DNase I-like)
IPR000477

Reverse transcriptase domain
1. PF00078 (RVT_1)
  
  1,271 - 1,527
  
  Pfam
  PF00078 (RVT_1)
2. PS50878 (RT_POL)
  
  1,250 - 1,528
  
  PROSITE profiles
  PS50878 (RT_POL)

no IPR

Unintegrated signatures

Coil

313 - 340

COILS
Coil (Coil)

1,067 - 1,087

COILS
Coil (Coil)

250 - 284

COILS
Coil (Coil)
SSF56672 (DNA/RNA p...)

1,204 - 1,492

SUPERFAMILY
SSF56672 (DNA/RNA polymerases)
cd01650 (RT_nLTR_like)

1,263 - 1,528

CDD
cd01650 (RT_nLTR_like)
cd09077 (R1-I-EN)

775 - 970

CDD
cd09077 (R1-I-EN)
mobidb-lite (disord...)

741 - 767

MobiDB Lite
mobidb-lite (disorder_prediction)

348 - 446

MobiDB Lite
mobidb-lite (disorder_prediction)

1,803 - 1,827

MobiDB Lite
mobidb-lite (disorder_prediction)

167 - 187

MobiDB Lite
mobidb-lite (disorder_prediction)

1 - 134

MobiDB Lite
mobidb-lite (disorder_prediction)

475 - 500

MobiDB Lite
mobidb-lite (disorder_prediction)

Residue annotation

putative metal bin...

796E

putative metal binding site
796E, 962D
CDD
cd09077 (R1-I-EN)

962D

putative metal binding site
796E, 962D
CDD
cd09077 (R1-I-EN)
putative catalytic...

796E

putative catalytic site
796E, 852Y, 886D, 888N, 936D, 962D, 963H
CDD
cd09077 (R1-I-EN)

852Y

putative catalytic site
796E, 852Y, 886D, 888N, 936D, 962D, 963H
CDD
cd09077 (R1-I-EN)

886D

putative catalytic site
796E, 852Y, 886D, 888N, 936D, 962D, 963H
CDD
cd09077 (R1-I-EN)

888N

putative catalytic site
796E, 852Y, 886D, 888N, 936D, 962D, 963H
CDD
cd09077 (R1-I-EN)

936D

putative catalytic site
796E, 852Y, 886D, 888N, 936D, 962D, 963H
CDD
cd09077 (R1-I-EN)

962D

putative catalytic site
796E, 852Y, 886D, 888N, 936D, 962D, 963H
CDD
cd09077 (R1-I-EN)

963H

putative catalytic site
796E, 852Y, 886D, 888N, 936D, 962D, 963H
CDD
cd09077 (R1-I-EN)
phosphate binding ...

796E

phosphate binding site
796E, 852Y, 886D, 888N, 963H
CDD
cd09077 (R1-I-EN)

852Y

phosphate binding site
796E, 852Y, 886D, 888N, 963H
CDD
cd09077 (R1-I-EN)

886D

phosphate binding site
796E, 852Y, 886D, 888N, 963H
CDD
cd09077 (R1-I-EN)

888N

phosphate binding site
796E, 852Y, 886D, 888N, 963H
CDD
cd09077 (R1-I-EN)

963H

phosphate binding site
796E, 852Y, 886D, 888N, 963H
CDD
cd09077 (R1-I-EN)
putative NTP bindi...

1,354D

putative NTP binding site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,448D
CDD
cd01650 (RT_nLTR_like)

1,355I

putative NTP binding site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,448D
CDD
cd01650 (RT_nLTR_like)

1,356A

putative NTP binding site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,448D
CDD
cd01650 (RT_nLTR_like)

1,357N

putative NTP binding site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,448D
CDD
cd01650 (RT_nLTR_like)

1,358A

putative NTP binding site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,448D
CDD
cd01650 (RT_nLTR_like)

1,359F

putative NTP binding site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,448D
CDD
cd01650 (RT_nLTR_like)

1,413Q

putative NTP binding site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,448D
CDD
cd01650 (RT_nLTR_like)

1,448D

putative NTP binding site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,448D
CDD
cd01650 (RT_nLTR_like)
putative active si...

1,354D

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,355I

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,356A

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,357N

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,358A

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,359F

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,413Q

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,414G

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,446Y

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,448D

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,449D

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,524L

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)

1,525G

putative active site
1,354D, 1,355I, 1,356A, 1,357N, 1,358A, 1,359F, 1,413Q, 1,414G, 1,446Y, 1,448D, 1,449D, 1,524L, 1,525G
CDD
cd01650 (RT_nLTR_like)
putative nucleic a...

1,414G

putative nucleic acid binding site
1,414G
CDD
cd01650 (RT_nLTR_like)

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

KWMTBOMO01242

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component