Protein

KWMTBOMO00101

Length
1,267 amino acids

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 200 400 600 800 1000 1267

Detailed signature matches

  1. Domain IPR001878
    Zinc finger, CCHC-type
    1. PS50158 (ZF_CCHC)
    2. G3DSA:4.10.60.10
    3. PF00098 (zf-CCHC)
    4. SM00343 (c2hcfinal6)
    5. SSF57756 (Retroviru...)
  2. Domain IPR021109
    Aspartic peptidase domain
    1. G3DSA:2.40.70.10
    2. SSF50630 (Acid prot...)
  3. Domain IPR001995
    Peptidase A2A, retrovirus, catalytic
    1. PS50175 (ASP_PROT_R...)
  4. Domain IPR000477
    Reverse transcriptase domain
    1. PF00078 (RVT_1)
    2. PS50878 (RT_POL)
  5. Domain IPR015416
    Zinc finger, H2C2-type, histone UAS binding
    1. PF09337 (zf-H2C2)
  6. Domain IPR012337
    Ribonuclease H-like domain
    1. G3DSA:3.30.42...
    2. SSF53098 (Ribonucle...)
  7. Domain IPR001584
    Integrase, catalytic core
    1. PS50994 (INTEGRASE)
    2. PF00665 (rve)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.10.10.10
  3. G3DSA:3.30.70...
  4. SSF56672 (DNA/RNA p...)
  5. cd00303 (retropepsi...)
  6. cd01647 (RT_LTR)
  7. cd09274 (RNase_HI_R...)

Residue annotation

  1. Catalytic residue ...
  2. catalytic motif cd...
  3. inhibitor binding ...
  4. Active site flap c...
  5. putative NTP bindi...
  6. putative active si...
  7. putative nucleic a...
  8. active site cd09274
  9. RNA/DNA hybrid bin...

GO term prediction

Biological Process

GO:0006508 proteolysis
GO:0015074 DNA integration

Molecular Function

GO:0003676 nucleic acid binding
GO:0004190 aspartic-type endopeptidase activity
GO:0008270 zinc ion binding

Cellular Component

None predicted.