SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/3812
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1921 ceN-3563
750bp
unknown/Bm_scaf187
141394bp
UniRef50_UPI0000DB765A (57%/42)
Cluster: PREDICTED: similar to ankyrin repeat domain 50; n=2; Apis mellifera|Rep: PREDICTED: similar to ankyrin repeat domain 50 - Apis mellifera
1922 ceN-3564
583bp
chromo19/Bm_scaf28
4702674bp
UniRef50_Q6UV17 (98%/119)
Cluster: Endonuclease and reverse transcriptase-like protein; n=25; Arthropoda|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
1923 ceN-3565
693bp
chromo4/Bm_scaf5
8683647bp
UniRef50_UPI0000E462EF (46%/52)
Cluster: PREDICTED: similar to CG31332-PD, partial; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to CG31332-PD, partial - Strongylocentrotus purpuratus
1924 ceN-3566
697bp
chromo2/Bm_scaf27
4962828bp
UniRef50_Q8IB10 (31%/63)
Cluster: Putative uncharacterized protein MAL8P1.74; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein MAL8P1.74 - Plasmodium falciparum (isolate 3D7)
1925 ceN-3567
738bp
unknown/
0bp
UniRef50_P16709 (100%/77)
Cluster: Ubiquitin-like protein precursor; n=19; root|Rep: Ubiquitin-like protein precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005634 C nucleus
GO:0006464 P cellular protein modification process
GO:0006512 P obsolete ubiquitin cycle
GO:0019028 C viral capsid
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0016032 P viral process
GO:0019082 P viral protein processing
1926 ceN-3569
706bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (93%/204)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
1927 ceN-3573
747bp
chromo10/Bm_scaf30
4522305bp
UniRef50_UPI00015B5D89 (89%/185)
Cluster: PREDICTED: similar to jun activation domain binding protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to jun activation domain binding protein - Nasonia vitripennis
GO:0000074 P regulation of cell cycle
GO:0003713 F transcription coactivator activity
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006366 P transcription by RNA polymerase II
GO:0006412 P translation
GO:0008180 C COP9 signalosome
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1928 ceN-3574
491bp
chromo19/Bm_scaf28
4702674bp
UniRef50_Q4Z0C1 (100%/14)
Cluster: Putative uncharacterized protein; n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein - Plasmodium berghei
1929 ceN-3575
761bp
unknown/Bm_scaf30497_contig75707
601bp
UniRef50_A4KWG0 (48%/33)
Cluster: Reverse transcriptase; n=3; Ostrinia nubilalis|Rep: Reverse transcriptase - Ostrinia nubilalis (European corn borer)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0008967 F phosphoglycolate phosphatase activity
GO:0016787 F hydrolase activity
1930 ceN-3576
714bp
unknown/Bm_scaf180
167546bp
UniRef50_P22922 (98%/181)
Cluster: Antitrypsin precursor; n=33; Ditrysia|Rep: Antitrypsin precursor - Bombyx mori (Silk moth)
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0008233 F peptidase activity
1931 ceN-3577
345bp
chromo18/Bm_scaf2
11281751bp
UniRef50_Q17249 (96%/85)
Cluster: Urbain; n=1; Bombyx mori|Rep: Urbain - Bombyx mori (Silk moth)
GO:0004871 F obsolete signal transducer activity
GO:0006935 P chemotaxis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0005622 C intracellular anatomical structure
GO:0006886 P intracellular protein transport
GO:0016740 F transferase activity
1932 ceN-3578
632bp
chromo12/Bm_scaf127
658317bp
UniRef50_Q93355 (40%/42)
Cluster: Putative uncharacterized protein; n=1; Caenorhabditis elegans|Rep: Putative uncharacterized protein - Caenorhabditis elegans
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0006914 P autophagy
1933 ceN-3582
760bp
chromo6/Bm_scaf11
6993210bp
UniRef50_Q17B07 (24%/93)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
1934 ceN-3583
692bp
chromo1/Bm_scaf26
4824072bp
UniRef50_UPI0000DB72ED (46%/177)
Cluster: PREDICTED: similar to CG33950-PD, isoform D; n=1; Apis mellifera|Rep: PREDICTED: similar to CG33950-PD, isoform D - Apis mellifera
1935 ceN-3585
427bp
chromo16/Bm_scaf39
3876397bp
UniRef50_P62136 (88%/78)
Cluster: Serine/threonine-protein phosphatase PP1-alpha catalytic subunit; n=337; root|Rep: Serine/threonine-protein phosphatase PP1-alpha catalytic subunit - Homo sapiens (Human)
GO:0000163 F protein serine/threonine phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0046872 F metal ion binding
GO:0051301 P cell division
1936 ceN-3586
546bp
chromo1/Bm_scaf23
5097954bp
UniRef50_Q36327 (29%/55)
Cluster: Orf262 protein; n=2; Chondrus crispus|Rep: Orf262 protein - Chondrus crispus (Carragheen)
GO:0005739 C mitochondrion
1937 ceN-3588
509bp
chromo25/Bm_scaf57
2485960bp
UniRef50_A0MNZ0 (66%/27)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
GO:0003824 F catalytic activity
1938 ceN-3589
670bp
chromo3/Bm_scaf55
2715649bp
UniRef50_Q94901 (77%/167)
Cluster: RNA-binding protein lark; n=8; Endopterygota|Rep: RNA-binding protein lark - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016068 P type I hypersensitivity
1939 ceN-3590
637bp
unknown/Bm_scaf6271_contig51480
891bp
UniRef50_Q4PMZ6 (56%/53)
Cluster: Putative secreted protein; n=1; Ixodes scapularis|Rep: Putative secreted protein - Ixodes scapularis (Black-legged tick) (Deer tick)
1940 ceN-3591
669bp
chromo9/Bm_scaf14
6760189bp
UniRef50_A0MNZ0 (68%/22)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
1941 ceN-3592
398bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q08YY3 (30%/85)
Cluster: Diguanylate cyclase; n=2; Cystobacterineae|Rep: Diguanylate cyclase - Stigmatella aurantiaca DW4/3-1
GO:0000156 F phosphorelay response regulator activity
GO:0000160 P phosphorelay signal transduction system
GO:0006355 P regulation of transcription, DNA-templated
1942 ceN-3594
727bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q9U504 (25%/146)
Cluster: Putative cuticle protein; n=1; Manduca sexta|Rep: Putative cuticle protein - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0000155 F phosphorelay sensor kinase activity
GO:0000160 P phosphorelay signal transduction system
GO:0004871 F obsolete signal transducer activity
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
1943 ceN-3595
689bp
chromo20/Bm_scaf79
1594848bp
UniRef50_P48375 (78%/108)
Cluster: 12 kDa FK506-binding protein; n=24; Eukaryota|Rep: 12 kDa FK506-binding protein - Drosophila melanogaster (Fruit fly)
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0006936 P muscle contraction
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0016020 C membrane
1944 ceN-3598
730bp
chromo3/Bm_scaf55
2715649bp
UniRef50_Q94901 (47%/233)
Cluster: RNA-binding protein lark; n=8; Endopterygota|Rep: RNA-binding protein lark - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016068 P type I hypersensitivity
1945 ceN-3600
723bp
unknown/Bm_scaf39668_contig84878
511bp
UniRef50_A5DJW9 (27%/130)
Cluster: Putative uncharacterized protein; n=1; Pichia guilliermondii|Rep: Putative uncharacterized protein - Pichia guilliermondii (Yeast) (Candida guilliermondii)
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0017111 F nucleoside-triphosphatase activity
GO:0003824 F catalytic activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0048037 F obsolete cofactor binding
1946 ceN-3601
575bp
chromo21/Bm_scaf86
1549195bp
UniRef50_Q9HWU4 (35%/56)
Cluster: Usher CupB3; n=9; Proteobacteria|Rep: Usher CupB3 - Pseudomonas aeruginosa
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0003677 F DNA binding
GO:0046983 F protein dimerization activity
1947 ceN-3604
739bp
chromo9/Bm_scaf14
6760189bp
UniRef50_A0DI97 (36%/55)
Cluster: Chromosome undetermined scaffold_51, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_51, whole genome shotgun sequence - Paramecium tetraurelia
1948 ceN-3606
762bp
chromo23/Bm_scaf12
6701349bp
UniRef50_O97428 (70%/124)
Cluster: CG4944-PA, isoform A; n=9; Neoptera|Rep: CG4944-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007010 P cytoskeleton organization
GO:0007420 P brain development
GO:0035193 P larval central nervous system remodeling
1949 ceN-3607
610bp
chromo25/Bm_scaf46
3255295bp
UniRef50_Q07864 (39%/172)
Cluster: DNA polymerase epsilon catalytic subunit A; n=55; Eumetazoa|Rep: DNA polymerase epsilon catalytic subunit A - Homo sapiens (Human)
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003893 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
1950 ceN-3608
484bp
unknown/
0bp
UniRef50_P69037 (97%/148)
Cluster: FP protein; n=15; Nucleopolyhedrovirus|Rep: FP protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
previous next from show/3812

- SilkBase 1999-2023 -