SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/6008
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1921 fprWP09_F_G14
507bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q9W5R8 (66%/127)
Cluster: 60S ribosomal protein L5; n=67; Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008097 F 5S rRNA binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
1922 fprWP09_F_G15
441bp
chromo14/Bm_scaf81
1583493bp
UniRef50_P62249 (76%/129)
Cluster: 40S ribosomal protein S16; n=64; Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005737 C cytoplasm
1923 fprWP09_F_G16
327bp
chromo19/Bm_scaf60
2449460bp
UniRef50_Q8IH26 (74%/35)
Cluster: GM20929p; n=4; Diptera|Rep: GM20929p - Drosophila melanogaster (Fruit fly)
GO:0016740 F transferase activity
1924 fprWP09_F_G18
630bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q8MR51 (53%/103)
Cluster: GH20064p; n=5; Diptera|Rep: GH20064p - Drosophila melanogaster (Fruit fly)
GO:0016787 F hydrolase activity
1925 fprWP09_F_G19
606bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q5UAT5 (91%/160)
Cluster: 60S ribosomal protein L6; n=15; Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori (Silk moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0006355 P regulation of transcription, DNA-templated
1926 fprWP09_F_G22
523bp
chromo23/Bm_scaf12
6701349bp
UniRef50_A4KW82 (23%/104)
Cluster: Ubiquitin specific protease-2; n=11; Plasmodium (Vinckeia)|Rep: Ubiquitin specific protease-2 - Plasmodium chabaudi
GO:0004221 F obsolete ubiquitin thiolesterase activity
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0004713 F protein tyrosine kinase activity
1927 fprWP09_F_G23
460bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q95S87 (54%/84)
Cluster: GM05817p; n=6; Endopterygota|Rep: GM05817p - Drosophila melanogaster (Fruit fly)
1928 fprWP09_F_H01
492bp
chromo15/Bm_scaf66
2037340bp
UniRef50_UPI0000E46659 (38%/50)
Cluster: PREDICTED: similar to roundabout homolog 2; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to roundabout homolog 2 - Strongylocentrotus purpuratus
1929 fprWP09_F_H02
454bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5MGF5 (56%/58)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
1930 fprWP09_F_H03
652bp
chromo15/Bm_scaf3
9954263bp
UniRef50_O60869 (67%/133)
Cluster: Endothelial differentiation-related factor 1; n=52; Eukaryota|Rep: Endothelial differentiation-related factor 1 - Homo sapiens (Human)
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0005737 C cytoplasm
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008168 F methyltransferase activity
GO:0016563 F obsolete transcription activator activity
GO:0019216 P regulation of lipid metabolic process
GO:0030154 P cell differentiation
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045446 P endothelial cell differentiation
GO:0045449 P regulation of transcription, DNA-templated
GO:0005730 C nucleolus
GO:0045941 P positive regulation of transcription, DNA-templated
GO:0005739 C mitochondrion
GO:0045944 P positive regulation of transcription by RNA polymerase II
1931 fprWP09_F_H04
619bp
chromo26/Bm_scaf25
4930657bp
UniRef50_Q96K17 (70%/117)
Cluster: Transcription factor BTF3 homolog 4; n=59; Eukaryota|Rep: Transcription factor BTF3 homolog 4 - Homo sapiens (Human)
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
1932 fprWP09_F_H06
652bp
chromo22/Bm_scaf61
2256882bp
UniRef50_P41042 (75%/178)
Cluster: 40S ribosomal protein S4; n=38; Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0000074 P regulation of cell cycle
GO:0005843 C cytosolic small ribosomal subunit
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
1933 fprWP09_F_H08
395bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q7PZX9 (77%/99)
Cluster: ENSANGP00000014054; n=2; Culicidae|Rep: ENSANGP00000014054 - Anopheles gambiae str. PEST
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005737 C cytoplasm
1934 fprWP09_F_H09
401bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P15532 (78%/105)
Cluster: Nucleoside diphosphate kinase A; n=92; cellular organisms|Rep: Nucleoside diphosphate kinase A - Mus musculus (Mouse)
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004550 F nucleoside diphosphate kinase activity
GO:0005524 F ATP binding
GO:0005625 C obsolete soluble fraction
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005792 C obsolete microsome
GO:0006183 P GTP biosynthetic process
GO:0006228 P UTP biosynthetic process
GO:0006241 P CTP biosynthetic process
GO:0007595 P lactation
GO:0009117 P nucleotide metabolic process
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0030879 P mammary gland development
GO:0046872 F metal ion binding
GO:0001726 C ruffle
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0008285 P negative regulation of cell population proliferation
GO:0009142 P nucleoside triphosphate biosynthetic process
GO:0030027 C lamellipodium
GO:0043066 P negative regulation of apoptotic process
GO:0045618 P positive regulation of keratinocyte differentiation
GO:0045682 P regulation of epidermis development
GO:0045786 P negative regulation of cell cycle
GO:0050679 P positive regulation of epithelial cell proliferation
GO:0006915 P apoptotic process
GO:0006917 P apoptotic process
GO:0005739 C mitochondrion
GO:0009507 C chloroplast
GO:0009579 C thylakoid
1935 fprWP09_F_H10
600bp
chromo19/Bm_scaf60
2449460bp
UniRef50_P13639 (79%/170)
Cluster: Elongation factor 2; n=491; Eukaryota|Rep: Elongation factor 2 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0045335 C phagocytic vesicle
1936 fprWP09_F_H12
651bp
unknown/Bm_scaf1453
4011bp
UniRef50_P34842 (55%/211)
Cluster: Cytochrome c oxidase subunit 3; n=18; cellular organisms|Rep: Cytochrome c oxidase subunit 3 - Anopheles gambiae (African malaria mosquito)
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0006118 P obsolete electron transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0006123 P mitochondrial electron transport, cytochrome c to oxygen
1937 fprWP09_F_H13
415bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5MGF5 (58%/58)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
1938 fprWP09_F_H14
335bp
chromo22/Bm_scaf18
5904300bp
UniRef50_P61927 (62%/93)
Cluster: 60S ribosomal protein L37; n=40; Euteleostomi|Rep: 60S ribosomal protein L37 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0005737 C cytoplasm
1939 fprWP09_F_H15
351bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P08570 (88%/67)
Cluster: 60S acidic ribosomal protein P1; n=15; Eukaryota|Rep: 60S acidic ribosomal protein P1 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
1940 fprWP09_F_H16
605bp
chromo20/Bm_scaf79
1594848bp
UniRef50_P48375 (78%/108)
Cluster: 12 kDa FK506-binding protein; n=24; Eukaryota|Rep: 12 kDa FK506-binding protein - Drosophila melanogaster (Fruit fly)
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0006936 P muscle contraction
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0016020 C membrane
1941 fprWP09_F_H18
654bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q9W5R8 (71%/160)
Cluster: 60S ribosomal protein L5; n=67; Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008097 F 5S rRNA binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
1942 fprWP09_F_H19
603bp
chromo19/Bm_scaf36
4352778bp
UniRef50_Q5T5U9 (68%/139)
Cluster: Selenophosphate synthetase 1; n=7; Amniota|Rep: Selenophosphate synthetase 1 - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0004756 F selenide, water dikinase activity
GO:0005524 F ATP binding
GO:0000166 F nucleotide binding
GO:0005575 C cellular_component
GO:0008430 F selenium binding
GO:0016260 P selenocysteine biosynthetic process
GO:0016301 F kinase activity
GO:0016740 F transferase activity
1943 fprWP09_F_H20
392bp
unknown/Bm_scaf1114_contig45323
5376bp
UniRef50_P62910 (82%/103)
Cluster: 60S ribosomal protein L32; n=83; Eukaryota|Rep: 60S ribosomal protein L32 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1944 fprWP09_F_H21
631bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q9W430 (38%/173)
Cluster: CG3599-PA; n=2; Sophophora|Rep: CG3599-PA - Drosophila melanogaster (Fruit fly)
GO:0006807 P nitrogen compound metabolic process
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016811 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
GO:0008150 P biological_process
GO:0016787 F hydrolase activity
GO:0019898 C extrinsic component of membrane
1945 fprWP09_F_H22
565bp
chromo10/Bm_scaf30
4522305bp
UniRef50_P27635 (79%/173)
Cluster: 60S ribosomal protein L10; n=53; Fungi/Metazoa group|Rep: 60S ribosomal protein L10 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
1946 fprWP09_F_H24
435bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9GP16 (91%/124)
Cluster: 60S ribosomal protein L31; n=27; Coelomata|Rep: 60S ribosomal protein L31 - Heliothis virescens (Noctuid moth) (Owlet moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
1947 fprWP09_F_I03
514bp
chromo16/Bm_scaf39
3876397bp
UniRef50_P42037 (44%/113)
Cluster: 60S acidic ribosomal protein P2; n=13; Eukaryota|Rep: 60S acidic ribosomal protein P2 - Alternaria alternata (Alternaria rot fungus)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
1948 fprWP09_F_I04
554bp
chromo5/Bm_scaf20
5834375bp
UniRef50_A4KWG0 (66%/24)
Cluster: Reverse transcriptase; n=3; Ostrinia nubilalis|Rep: Reverse transcriptase - Ostrinia nubilalis (European corn borer)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
1949 fprWP09_F_I06
473bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q5EMT9 (78%/56)
Cluster: Elongation factor 1-alpha-like protein; n=6; Fungi/Metazoa group|Rep: Elongation factor 1-alpha-like protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
1950 fprWP09_F_I10
482bp
chromo12/Bm_scaf84
1632705bp
UniRef50_UPI000155314F (91%/123)
Cluster: PREDICTED: similar to ubiquitin A-52 residue ribosomal protein fusion product 1; n=3; Euarchontoglires|Rep: PREDICTED: similar to ubiquitin A-52 residue ribosomal protein fusion product 1 - Mus musculus
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006464 P cellular protein modification process
previous next from show/6008

- SilkBase 1999-2023 -