SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/6008
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1861 fprWP09_F_B22
435bp
chromo16/Bm_scaf39
3876397bp
UniRef50_P42037 (43%/113)
Cluster: 60S acidic ribosomal protein P2; n=13; Eukaryota|Rep: 60S acidic ribosomal protein P2 - Alternaria alternata (Alternaria rot fungus)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
1862 fprWP09_F_B23
650bp
chromo18/Bm_scaf2
11281751bp
UniRef50_Q8SXQ5 (79%/102)
Cluster: RH03087p; n=3; Endopterygota|Rep: RH03087p - Drosophila melanogaster (Fruit fly)
GO:0009055 F electron transfer activity
GO:0015035 F protein-disulfide reductase activity
GO:0045454 P cell redox homeostasis
GO:0005739 C mitochondrion
1863 fprWP09_F_B24
500bp
chromo17/Bm_scaf114
978332bp
UniRef50_P62847 (84%/117)
Cluster: 40S ribosomal protein S24; n=212; Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
1864 fprWP09_F_C01
384bp
chromo19/Bm_scaf28
4702674bp
UniRef50_P62745 (97%/96)
Cluster: Rho-related GTP-binding protein RhoB precursor; n=22; Fungi/Metazoa group|Rep: Rho-related GTP-binding protein RhoB precursor - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0001525 P angiogenesis
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0006927 P obsolete transformed cell apoptotic process
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007264 P small GTPase mediated signal transduction
GO:0007266 P Rho protein signal transduction
GO:0007275 P multicellular organism development
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0045786 P negative regulation of cell cycle
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0008406 P gonad development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0014057 P positive regulation of acetylcholine secretion, neurotransmission
GO:0016477 P cell migration
GO:0019901 F protein kinase binding
GO:0040001 P establishment of mitotic spindle localization
GO:0040016 P embryonic cleavage
GO:0040017 P positive regulation of locomotion
1865 fprWP09_F_C02
442bp
chromo10/Bm_scaf30
4522305bp
UniRef50_Q5TGZ0 (30%/53)
Cluster: UPF0327 protein C1orf151; n=12; Eutheria|Rep: UPF0327 protein C1orf151 - Homo sapiens (Human)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1866 fprWP09_F_C03
429bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P62424 (72%/79)
Cluster: 60S ribosomal protein L7a; n=226; Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005624 C obsolete membrane fraction
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0042788 C polysomal ribosome
1867 fprWP09_F_C07
423bp
unknown/Bm_scaf186
120459bp
UniRef50_Q9BWJ5 (83%/85)
Cluster: Splicing factor 3B subunit 5; n=16; Eukaryota|Rep: Splicing factor 3B subunit 5 - Homo sapiens (Human)
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
1868 fprWP09_F_C10
653bp
chromo6/Bm_scaf11
6993210bp
UniRef50_Q0N2S3 (78%/175)
Cluster: Eukaryotic initiation factor 4B protein; n=1; Bombyx mori|Rep: Eukaryotic initiation factor 4B protein - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003743 F translation initiation factor activity
GO:0005829 C cytosol
GO:0006413 P translational initiation
GO:0008283 P cell population proliferation
1869 fprWP09_F_C11
426bp
chromo7/Bm_scaf15
6423983bp
UniRef50_P42677 (85%/84)
Cluster: 40S ribosomal protein S27; n=74; Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
1870 fprWP09_F_C12
469bp
chromo14/Bm_scaf38
4008358bp
(no hit)
1871 fprWP09_F_C13
347bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q7PSG3 (44%/25)
Cluster: ENSANGP00000019800; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000019800 - Anopheles gambiae str. PEST
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1872 fprWP09_F_C15
433bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9GP16 (91%/124)
Cluster: 60S ribosomal protein L31; n=27; Coelomata|Rep: 60S ribosomal protein L31 - Heliothis virescens (Noctuid moth) (Owlet moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
1873 fprWP09_F_C16
653bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q962S5 (95%/20)
Cluster: Ribosomal protein L38; n=14; Eukaryota|Rep: Ribosomal protein L38 - Spodoptera frugiperda (Fall armyworm)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0007276 P gamete generation
GO:0040010 P positive regulation of growth rate
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
1874 fprWP09_F_C17
570bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P62266 (88%/143)
Cluster: 40S ribosomal protein S23; n=141; cellular organisms|Rep: 40S ribosomal protein S23 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006450 P regulation of translational fidelity
GO:0019843 F rRNA binding
1875 fprWP09_F_C18
614bp
chromo19/Bm_scaf36
4352778bp
UniRef50_UPI00015B6411 (62%/153)
Cluster: PREDICTED: similar to CG2852-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG2852-PA - Nasonia vitripennis
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0042277 F peptide binding
GO:0051082 F unfolded protein binding
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0016018 F cyclosporin A binding
1876 fprWP09_F_C21
319bp
chromo10/Bm_scaf44
3277875bp
UniRef50_P35222 (55%/40)
Cluster: Catenin beta-1; n=64; Bilateria|Rep: Catenin beta-1 - Homo sapiens (Human)
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001501 P skeletal system development
GO:0001569 P branching involved in blood vessel morphogenesis
GO:0001706 P endoderm formation
GO:0001708 P cell fate specification
GO:0001709 P cell fate determination
GO:0001711 P endodermal cell fate commitment
GO:0001837 P epithelial to mesenchymal transition
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004871 F obsolete signal transducer activity
GO:0005198 F structural molecule activity
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005624 C obsolete membrane fraction
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005916 C fascia adherens
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007155 P cell adhesion
GO:0007268 P chemical synaptic transmission
GO:0007398 P ectoderm development
GO:0007507 P heart development
GO:0008022 F protein C-terminus binding
GO:0009950 P dorsal/ventral axis specification
GO:0009953 P dorsal/ventral pattern formation
GO:0009954 P proximal/distal pattern formation
GO:0009987 P cellular process
GO:0010003 P gastrulation with mouth forming second
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016331 P morphogenesis of embryonic epithelium
GO:0016337 P cell-cell adhesion
GO:0030018 C Z disc
GO:0030027 C lamellipodium
GO:0030097 P hemopoiesis
GO:0030154 P cell differentiation
GO:0030316 P osteoclast differentiation
GO:0030324 P lung development
GO:0030521 P androgen receptor signaling pathway
GO:0030858 P positive regulation of epithelial cell differentiation
GO:0030877 C beta-catenin destruction complex
GO:0030900 P forebrain development
GO:0031016 P pancreas development
GO:0031528 C microvillus membrane
GO:0035116 P embryonic hindlimb morphogenesis
GO:0035117 P embryonic forelimb morphogenesis
GO:0042127 P regulation of cell population proliferation
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0042733 P embryonic digit morphogenesis
GO:0045177 C apical part of cell
GO:0045294 F alpha-catenin binding
GO:0045296 F cadherin binding
GO:0045449 P regulation of transcription, DNA-templated
GO:0045453 P bone resorption
GO:0045595 P regulation of cell differentiation
GO:0045596 P negative regulation of cell differentiation
GO:0045667 P regulation of osteoblast differentiation
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045671 P negative regulation of osteoclast differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045941 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048469 P cell maturation
GO:0048489 P synaptic vesicle transport
GO:0048593 P camera-type eye morphogenesis
GO:0050681 F androgen receptor binding
GO:0050808 P synapse organization
GO:0060070 P canonical Wnt signaling pathway
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0008270 F zinc ion binding
GO:0005625 C obsolete soluble fraction
GO:0005829 C cytosol
GO:0008092 F cytoskeletal protein binding
GO:0030057 C desmosome
1877 fprWP09_F_C22
443bp
unknown/Bm_scaf219
154958bp
UniRef50_Q177Y4 (59%/102)
Cluster: Allergen, putative; n=4; Endopterygota|Rep: Allergen, putative - Aedes aegypti (Yellowfever mosquito)
GO:0005215 F transporter activity
GO:0005488 F binding
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0005737 C cytoplasm
1878 fprWP09_F_C24
653bp
unknown/Bm_scaf148
369198bp
UniRef50_Q9NX47 (64%/135)
Cluster: E3 ubiquitin-protein ligase MARCH5; n=32; Eumetazoa|Rep: E3 ubiquitin-protein ligase MARCH5 - Homo sapiens (Human)
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006512 P obsolete ubiquitin cycle
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0019867 C outer membrane
GO:0046872 F metal ion binding
1879 fprWP09_F_D02
653bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q5UAT5 (92%/160)
Cluster: 60S ribosomal protein L6; n=15; Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori (Silk moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0006355 P regulation of transcription, DNA-templated
1880 fprWP09_F_D04
648bp
chromo14/Bm_scaf53
2821953bp
UniRef50_Q4QQ27 (27%/141)
Cluster: IP09353p; n=1; Drosophila melanogaster|Rep: IP09353p - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
1881 fprWP09_F_D09
568bp
chromo12/Bm_scaf67
2138634bp
UniRef50_O95807 (58%/92)
Cluster: Transmembrane protein 50A; n=31; Eumetazoa|Rep: Transmembrane protein 50A - Homo sapiens (Human)
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
1882 fprWP09_F_D11
507bp
chromo20/Bm_scaf96
1469819bp
UniRef50_P55828 (86%/115)
Cluster: 40S ribosomal protein S20; n=28; Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0005829 C cytosol
1883 fprWP09_F_D13
655bp
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI00005A4635 (92%/197)
Cluster: PREDICTED: similar to statin-like; n=2; Canis lupus familiaris|Rep: PREDICTED: similar to statin-like - Canis familiaris
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
1884 fprWP09_F_D14
374bp
chromo22/Bm_scaf61
2256882bp
UniRef50_Q0SU98 (39%/56)
Cluster: DNA/RNA helicase, SNF2; n=2; Clostridium perfringens|Rep: DNA/RNA helicase, SNF2 - Clostridium perfringens (strain SM101 / Type A)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008270 F zinc ion binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0006508 P proteolysis
GO:0030436 P asexual sporulation
GO:0016021 C integral component of membrane
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0006810 P transport
GO:0015662 F P-type ion transporter activity
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1885 fprWP09_F_D15
653bp
unknown/Bm_scaf1453
4011bp
UniRef50_Q4FH11 (55%/189)
Cluster: Cytochrome c oxidase subunit I; n=26; Bilateria|Rep: Cytochrome c oxidase subunit I - Samia cynthia ricini (Indian eri silkmoth)
GO:0004129 F cytochrome-c oxidase activity
GO:0005506 F iron ion binding
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
1886 fprWP09_F_D17
565bp
chromo14/Bm_scaf81
1583493bp
UniRef50_P62249 (82%/141)
Cluster: 40S ribosomal protein S16; n=64; Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005737 C cytoplasm
1887 fprWP09_F_D18
577bp
chromo25/Bm_scaf46
3255295bp
UniRef50_O46339 (86%/37)
Cluster: Dorsotonals; n=14; Neoptera|Rep: Dorsotonals - Drosophila melanogaster (Fruit fly)
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007380 P specification of segmental identity, head
GO:0007383 P specification of segmental identity, antennal segment
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007432 P salivary gland boundary specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0009954 P proximal/distal pattern formation
GO:0010092 P specification of animal organ identity
GO:0035282 P segmentation
GO:0043565 F sequence-specific DNA binding
GO:0045449 P regulation of transcription, DNA-templated
GO:0048735 P haltere morphogenesis
GO:0048749 P compound eye development
GO:0003702 F obsolete RNA polymerase II transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005667 C transcription regulator complex
GO:0006350 P transcription, DNA-templated
GO:0007275 P multicellular organism development
1888 fprWP09_F_D20
587bp
chromo1/Bm_scaf8
8002931bp
UniRef50_UPI0000583D3F (38%/119)
Cluster: PREDICTED: hypothetical protein; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: hypothetical protein - Strongylocentrotus purpuratus
GO:0006457 P protein folding
GO:0016272 C prefoldin complex
GO:0051082 F unfolded protein binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0007049 P cell cycle
1889 fprWP09_F_D21
402bp
chromo21/Bm_scaf7
8313734bp
UniRef50_P62841 (68%/95)
Cluster: 40S ribosomal protein S15; n=46; cellular organisms|Rep: 40S ribosomal protein S15 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0000056 P ribosomal small subunit export from nucleus
GO:0042254 P ribosome biogenesis
1890 fprWP09_F_D22
364bp
chromo3/Bm_scaf17
6395444bp
UniRef50_UPI0000E47F16 (76%/89)
Cluster: PREDICTED: similar to ribosomal protein L37a; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to ribosomal protein L37a - Strongylocentrotus purpuratus
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
previous next from show/6008

- SilkBase 1999-2023 -