SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/6008
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1351 fprWP06_F_O15
653bp
unknown/Bm_scaf290
44448bp
UniRef50_Q0ZAL3 (41%/141)
Cluster: Splicing factor proline-and glutamine-rich; n=4; Endopterygota|Rep: Splicing factor proline-and glutamine-rich - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
1352 fprWP06_F_O16
592bp
chromo3/Bm_scaf17
6395444bp
UniRef50_P62913 (85%/161)
Cluster: 60S ribosomal protein L11; n=156; Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0006605 P protein targeting
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0000027 P ribosomal large subunit assembly
GO:0005737 C cytoplasm
1353 fprWP06_F_O19
657bp
chromo24/Bm_scaf52
2812387bp
UniRef50_Q1HPN0 (91%/162)
Cluster: Insulin-related peptide binding protein; n=1; Bombyx mori|Rep: Insulin-related peptide binding protein - Bombyx mori (Silk moth)
GO:0005515 F protein binding
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
1354 fprWP06_F_O20
636bp
chromo19/Bm_scaf36
4352778bp
UniRef50_P30050 (80%/160)
Cluster: 60S ribosomal protein L12; n=158; Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1355 fprWP06_F_O21
655bp
unknown/Bm_scaf223
72089bp
UniRef50_Q9VR89 (49%/179)
Cluster: RNA-binding protein pno1; n=25; Eukaryota|Rep: RNA-binding protein pno1 - Drosophila melanogaster (Fruit fly)
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006461 P protein-containing complex assembly
GO:0042254 P ribosome biogenesis
GO:0051082 F unfolded protein binding
GO:0000003 P reproduction
GO:0007276 P gamete generation
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040035 P hermaphrodite genitalia development
1356 fprWP06_F_P01
556bp
chromo14/Bm_scaf81
1583493bp
UniRef50_P62249 (82%/141)
Cluster: 40S ribosomal protein S16; n=64; Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005737 C cytoplasm
1357 fprWP06_F_P02
339bp
chromo22/Bm_scaf18
5904300bp
UniRef50_P61927 (64%/87)
Cluster: 60S ribosomal protein L37; n=40; Euteleostomi|Rep: 60S ribosomal protein L37 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0005737 C cytoplasm
1358 fprWP06_F_P03
654bp
chromo24/Bm_scaf115
864725bp
UniRef50_Q1HQ01 (96%/101)
Cluster: Ferritin isoform 2; n=1; Bombyx mori|Rep: Ferritin isoform 2 - Bombyx mori (Silk moth)
GO:0005488 F binding
GO:0006826 P iron ion transport
GO:0006879 P cellular iron ion homeostasis
GO:0008199 F ferric iron binding
GO:0016491 F oxidoreductase activity
GO:0046914 F transition metal ion binding
1359 fprWP06_F_P04
654bp
chromo16/Bm_scaf39
3876397bp
UniRef50_Q9VK60 (62%/103)
Cluster: CG6180-PA; n=22; Coelomata|Rep: CG6180-PA - Drosophila melanogaster (Fruit fly)
GO:0008289 F lipid binding
1360 fprWP06_F_P05
498bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P08570 (90%/52)
Cluster: 60S acidic ribosomal protein P1; n=15; Eukaryota|Rep: 60S acidic ribosomal protein P1 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
1361 fprWP06_F_P09
482bp
chromo28/Bm_scaf47
3212212bp
UniRef50_A6YPG5 (83%/140)
Cluster: 40S ribosomal protein S11; n=7; Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma infestans (Assassin bug)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0005843 C cytosolic small ribosomal subunit
GO:0019843 F rRNA binding
GO:0000028 P ribosomal small subunit assembly
GO:0000723 P telomere maintenance
GO:0005737 C cytoplasm
GO:0006450 P regulation of translational fidelity
GO:0005634 C nucleus
GO:0005829 C cytosol
1362 fprWP06_F_P10
472bp
chromo20/Bm_scaf96
1469819bp
UniRef50_P55828 (85%/115)
Cluster: 40S ribosomal protein S20; n=28; Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0005829 C cytosol
1363 fprWP06_F_P11
492bp
chromo6/Bm_scaf11
6993210bp
UniRef50_Q0K482 (36%/38)
Cluster: Transcriptional regulator, LuxR-family; n=2; Ralstonia eutropha H16|Rep: Transcriptional regulator, LuxR-family - Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier337))
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0004180 F carboxypeptidase activity
GO:0004182 F obsolete carboxypeptidase A activity
GO:0006508 P proteolysis
GO:0007155 P cell adhesion
GO:0008270 F zinc ion binding
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1364 fprWP06_F_P12
552bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P08570 (62%/112)
Cluster: 60S acidic ribosomal protein P1; n=15; Eukaryota|Rep: 60S acidic ribosomal protein P1 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
1365 fprWP06_F_P13
654bp
chromo8/Bm_scaf51
2786897bp
UniRef50_Q9W0M4 (54%/154)
Cluster: CG13887-PB, isoform B; n=9; Endopterygota|Rep: CG13887-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0006886 P intracellular protein transport
GO:0006915 P apoptotic process
GO:0016021 C integral component of membrane
GO:0004872 F signaling receptor activity
GO:0000139 C Golgi membrane
GO:0005102 F signaling receptor binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006955 P immune response
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
1366 fprWP06_F_P14
501bp
chromo19/Bm_scaf36
4352778bp
UniRef50_Q4V5X9 (84%/92)
Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
1367 fprWP06_F_P15
654bp
chromo2/Bm_scaf27
4962828bp
UniRef50_Q9Y020 (46%/188)
Cluster: 3-dehydroecdysone 3beta-reductase precursor; n=1; Spodoptera littoralis|Rep: 3-dehydroecdysone 3beta-reductase precursor - Spodoptera littoralis (Egyptian cotton leafworm)
GO:0016491 F oxidoreductase activity
1368 fprWP06_F_P16
653bp
unknown/Bm_scaf592
16419bp
UniRef50_Q6II06 (34%/172)
Cluster: HDC00027; n=6; Endopterygota|Rep: HDC00027 - Drosophila melanogaster (Fruit fly)
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
1369 fprWP06_F_P19
657bp
chromo14/Bm_scaf53
2821953bp
UniRef50_P23396 (89%/204)
Cluster: 40S ribosomal protein S3; n=174; Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
1370 fprWP06_F_P21
654bp
chromo10/Bm_scaf44
3277875bp
UniRef50_Q7K2L7 (52%/125)
Cluster: GH27120p; n=6; Endopterygota|Rep: GH27120p - Drosophila melanogaster (Fruit fly)
GO:0005509 F calcium ion binding
1371 fprWP06_F_P22
464bp
chromo2/Bm_scaf27
4962828bp
UniRef50_P48159 (96%/87)
Cluster: 60S ribosomal protein L23; n=39; cellular organisms|Rep: 60S ribosomal protein L23 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0006610 P ribosomal protein import into nucleus
1372 fprWP06_F_P24
643bp
chromo21/Bm_scaf86
1549195bp
UniRef50_P18621 (77%/76)
Cluster: 60S ribosomal protein L17; n=135; Eukaryota|Rep: 60S ribosomal protein L17 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
1373 fprWP07_F_A03
664bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q5DCR9 (58%/179)
Cluster: SJCHGC09405 protein; n=1; Schistosoma japonicum|Rep: SJCHGC09405 protein - Schistosoma japonicum (Blood fluke)
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0008289 F lipid binding
GO:0008526 F phosphatidylinositol transfer activity
1374 fprWP07_F_A07
618bp
chromo5/Bm_scaf9
8107424bp
UniRef50_P26373 (60%/84)
Cluster: 60S ribosomal protein L13; n=111; Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005830 C cytosolic ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1375 fprWP07_F_A15
653bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q9U1L3 (66%/142)
Cluster: EG:BACR7A4.5 protein; n=5; Diptera|Rep: EG:BACR7A4.5 protein - Drosophila melanogaster (Fruit fly)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1376 fprWP07_F_A17
439bp
chromo7/Bm_scaf15
6423983bp
UniRef50_P42677 (87%/70)
Cluster: 40S ribosomal protein S27; n=74; Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
1377 fprWP07_F_A18
646bp
chromo3/Bm_scaf17
6395444bp
UniRef50_P62913 (85%/164)
Cluster: 60S ribosomal protein L11; n=156; Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0006605 P protein targeting
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0000027 P ribosomal large subunit assembly
GO:0005737 C cytoplasm
1378 fprWP07_F_A20
653bp
unknown/Bm_scaf148
369198bp
UniRef50_Q8SZ89 (47%/157)
Cluster: RE13149p; n=8; Bilateria|Rep: RE13149p - Drosophila melanogaster (Fruit fly)
GO:0000439 C transcription factor TFIIH core complex
GO:0006281 P DNA repair
GO:0006355 P regulation of transcription, DNA-templated
GO:0016251 F RNA polymerase II general transcription initiation factor activity
GO:0003684 F damaged DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006289 P nucleotide-excision repair
GO:0006350 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008135 F translation factor activity, RNA binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0005829 C cytosol
1379 fprWP07_F_A21
621bp
chromo11/Bm_scaf352
30459bp
UniRef50_A7KCW5 (81%/146)
Cluster: Ribosomal protein L14; n=1; Heliconius melpomene|Rep: Ribosomal protein L14 - Heliconius melpomene
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0043524 P negative regulation of neuron apoptotic process
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
1380 fprWP07_F_A22
434bp
chromo4/Bm_scaf5
8683647bp
UniRef50_P42766 (57%/121)
Cluster: 60S ribosomal protein L35; n=81; Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens (Human)
GO:0003729 F mRNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
previous next from show/6008

- SilkBase 1999-2023 -