SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/9984
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1981 fdpeP06_F_C13
1064bp
unknown/
0bp
UniRef50_Q8L685 (23%/226)
Cluster: Pherophorin-dz1 protein precursor; n=1; Volvox carteri f. nagariensis|Rep: Pherophorin-dz1 protein precursor - Volvox carteri f. nagariensis
GO:0005199 F structural constituent of cell wall
GO:0019867 C outer membrane
1982 fdpeP06_F_C14
918bp
chromo3/Bm_scaf17
6395444bp
UniRef50_P62913 (88%/144)
Cluster: 60S ribosomal protein L11; n=156; Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0006605 P protein targeting
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0000027 P ribosomal large subunit assembly
GO:0005737 C cytoplasm
1983 fdpeP06_F_C15
920bp
chromo1/Bm_scaf8
8002931bp
UniRef50_A2A246 (100%/98)
Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-box protein - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0006355 P regulation of transcription, DNA-templated
GO:0003729 F mRNA binding
1984 fdpeP06_F_C16
905bp
chromo23/Bm_scaf12
6701349bp
UniRef50_Q7RJC6 (97%/71)
Cluster: Ubiquitin; n=1; Plasmodium yoelii yoelii|Rep: Ubiquitin - Plasmodium yoelii yoelii
GO:0006464 P cellular protein modification process
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0016032 P viral process
GO:0019082 P viral protein processing
1985 fdpeP06_F_C17
927bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q9VNX4 (40%/119)
Cluster: CG7145-PA, isoform A; n=4; Diptera|Rep: CG7145-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0003842 F 1-pyrroline-5-carboxylate dehydrogenase activity
GO:0005515 F protein binding
GO:0005759 C mitochondrial matrix
GO:0006561 P proline biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
1986 fdpeP06_F_C18
763bp
unknown/
0bp
UniRef50_A4TTL3 (44%/38)
Cluster: Putative uncharacterized protein; n=2; cellular organisms|Rep: Putative uncharacterized protein - Magnetospirillum gryphiswaldense
GO:0003746 F translation elongation factor activity
1987 fdpeP06_F_C19
897bp
unknown/
0bp
UniRef50_Q3J9Q2 (32%/93)
Cluster: Putative uncharacterized protein precursor; n=1; Nitrosococcus oceani ATCC 19707|Rep: Putative uncharacterized protein precursor - Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
GO:0005488 F binding
1988 fdpeP06_F_C20
789bp
unknown/
0bp
(no hit)
1989 fdpeP06_F_C21
900bp
unknown/Bm_scaf317
37589bp
UniRef50_Q24564 (48%/197)
Cluster: Moesin/ezrin/radixin homolog 2; n=3; Diptera|Rep: Moesin/ezrin/radixin homolog 2 - Drosophila melanogaster (Fruit fly)
GO:0001558 P regulation of cell growth
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005915 C zonula adherens
GO:0006897 P endocytosis
GO:0007267 P cell-cell signaling
GO:0008092 F cytoskeletal protein binding
GO:0009798 P axis specification
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0019094 P pole plasm mRNA localization
GO:0019898 C extrinsic component of membrane
GO:0030054 C cell junction
GO:0042048 P olfactory behavior
GO:0042127 P regulation of cell population proliferation
GO:0045169 C fusome
GO:0045571 P negative regulation of imaginal disc growth
GO:0000074 P regulation of cell cycle
GO:0001953 P negative regulation of cell-matrix adhesion
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005769 C early endosome
GO:0007049 P cell cycle
GO:0007605 P sensory perception of sound
GO:0008156 P negative regulation of DNA replication
GO:0008285 P negative regulation of cell population proliferation
GO:0014010 P Schwann cell proliferation
GO:0022408 P negative regulation of cell-cell adhesion
GO:0030036 P actin cytoskeleton organization
GO:0030336 P negative regulation of cell migration
GO:0042518 P negative regulation of tyrosine phosphorylation of STAT protein
GO:0042524 P negative regulation of tyrosine phosphorylation of STAT protein
GO:0042995 C cell projection
GO:0045786 P negative regulation of cell cycle
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0048471 C perinuclear region of cytoplasm
GO:0051496 P positive regulation of stress fiber assembly
GO:0001726 C ruffle
GO:0005829 C cytosol
GO:0005884 C actin filament
GO:0005902 C microvillus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008360 P regulation of cell shape
GO:0015629 C actin cytoskeleton
GO:0030863 C cortical cytoskeleton
GO:0043621 F protein self-association
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
1990 fdpeP06_F_C22
910bp
chromo16/Bm_scaf4
9119588bp
UniRef50_P62318 (85%/103)
Cluster: Small nuclear ribonucleoprotein Sm D3; n=40; Fungi/Metazoa group|Rep: Small nuclear ribonucleoprotein Sm D3 - Homo sapiens (Human)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016071 P mRNA metabolic process
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
1991 fdpeP06_F_C23
920bp
chromo6/Bm_scaf78
1734898bp
UniRef50_Q2F665 (89%/157)
Cluster: Perilipin; n=1; Bombyx mori|Rep: Perilipin - Bombyx mori (Silk moth)
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0019915 P lipid storage
1992 fdpeP06_F_C24
892bp
chromo10/Bm_scaf30
4522305bp
UniRef50_P27635 (76%/137)
Cluster: 60S ribosomal protein L10; n=53; Fungi/Metazoa group|Rep: 60S ribosomal protein L10 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
1993 fdpeP06_F_D01
900bp
chromo2/Bm_scaf118
704489bp
UniRef50_P63220 (69%/83)
Cluster: 40S ribosomal protein S21; n=8; Bilateria|Rep: 40S ribosomal protein S21 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0043022 F ribosome binding
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0005515 F protein binding
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
1994 fdpeP06_F_D02
926bp
unknown/
0bp
UniRef50_P03087 (100%/19)
Cluster: Capsid protein VP1; n=1927; Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40 (SV40)
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0019012 C virion component
GO:0019028 C viral capsid
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005737 C cytoplasm
GO:0006817 P phosphate ion transport
1995 fdpeP06_F_D03
887bp
chromo18/Bm_scaf121
693607bp
UniRef50_Q9VXK6 (77%/63)
Cluster: Eukaryotic translation initiation factor 5; n=11; Coelomata|Rep: Eukaryotic translation initiation factor 5 - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0003924 F GTPase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008135 F translation factor activity, RNA binding
1996 fdpeP06_F_D04
908bp
chromo4/Bm_scaf13
6731059bp
UniRef50_Q02446 (39%/63)
Cluster: Transcription factor Sp4; n=23; Tetrapoda|Rep: Transcription factor Sp4 - Homo sapiens (Human)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003702 F obsolete RNA polymerase II transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008016 P regulation of heart contraction
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0035214 P eye-antennal disc development
GO:0035218 P leg disc development
GO:0035220 P wing disc development
GO:0048737 P imaginal disc-derived appendage development
1997 fdpeP06_F_D05
962bp
unknown/
0bp
UniRef50_A5B0K8 (56%/30)
Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape)
1998 fdpeP06_F_D06
938bp
unknown/
0bp
UniRef50_Q8L685 (25%/175)
Cluster: Pherophorin-dz1 protein precursor; n=1; Volvox carteri f. nagariensis|Rep: Pherophorin-dz1 protein precursor - Volvox carteri f. nagariensis
GO:0005199 F structural constituent of cell wall
GO:0019867 C outer membrane
1999 fdpeP06_F_D07
955bp
unknown/
0bp
UniRef50_Q5QJQ3 (93%/64)
Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium
GO:0003964 F RNA-directed DNA polymerase activity
2000 fdpeP06_F_D08
974bp
chromo21/Bm_scaf7
8313734bp
UniRef50_Q9XUJ2 (29%/61)
Cluster: Putative uncharacterized protein; n=2; Caenorhabditis|Rep: Putative uncharacterized protein - Caenorhabditis elegans
2001 fdpeP06_F_D09
882bp
chromo15/Bm_scaf64
2197771bp
UniRef50_P52167-3 (56%/107)
Cluster: Isoform 3 of P52167 ; n=1; Bombyx mori|Rep: Isoform 3 of P52167 - Bombyx mori (Silk moth)
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
2002 fdpeP06_F_D10
889bp
chromo11/Bm_scaf59
2341090bp
UniRef50_UPI000023C9B6 (32%/99)
Cluster: hypothetical protein FG00211.1; n=1; Gibberella zeae PH-1|Rep: hypothetical protein FG00211.1 - Gibberella zeae PH-1
GO:0016787 F hydrolase activity
2003 fdpeP06_F_D11
930bp
chromo10/Bm_scaf70
1945803bp
UniRef50_UPI00015B4CA3 (51%/150)
Cluster: PREDICTED: similar to ENSANGP00000017910; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000017910 - Nasonia vitripennis
2004 fdpeP06_F_D12
946bp
chromo23/Bm_scaf12
6701349bp
UniRef50_A0ST23 (75%/24)
Cluster: Putative reverse transcriptase; n=4; Magnoliophyta|Rep: Putative reverse transcriptase - Zingiber officinale (Ginger)
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0019012 C virion component
GO:0019028 C viral capsid
2005 fdpeP06_F_D13
912bp
chromo12/Bm_scaf119
726203bp
UniRef50_Q1HDZ3 (98%/81)
Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
2006 fdpeP06_F_D14
908bp
chromo6/Bm_scaf11
6993210bp
UniRef50_Q6IE02 (76%/221)
Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Rep: Mod(Mdg4)-heS00531 - Bombyx mori (Silk moth)
GO:0005515 F protein binding
2007 fdpeP06_F_D15
886bp
unknown/
0bp
UniRef50_A6RGJ8 (40%/60)
Cluster: Predicted protein; n=1; Ajellomyces capsulatus NAm1|Rep: Predicted protein - Ajellomyces capsulatus NAm1
2008 fdpeP06_F_D16
837bp
unknown/
0bp
UniRef50_A4QN64 (43%/53)
Cluster: Zgc:162320 protein; n=8; Danio rerio|Rep: Zgc:162320 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0003779 F actin binding
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
2009 fdpeP06_F_D17
944bp
unknown/
0bp
(no hit)
2010 fdpeP06_F_D18
931bp
chromo15/Bm_scaf3
9954263bp
UniRef50_UPI0000D55FDB (43%/206)
Cluster: PREDICTED: similar to CG10874-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG10874-PA, isoform A - Tribolium castaneum
previous next from show/9984

- SilkBase 1999-2023 -