SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/20736
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1741 BmNP03_FL5_I13
811bp
chromo21/Bm_scaf7
8313734bp
UniRef50_Q6NP10 (61%/186)
Cluster: LD13390p; n=7; Eukaryota|Rep: LD13390p - Drosophila melanogaster (Fruit fly)
GO:0006807 P nitrogen compound metabolic process
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0003824 F catalytic activity
GO:0003837 F beta-ureidopropionase activity
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1742 BmNP03_FL5_I14
836bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (27%/184)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0007268 P chemical synaptic transmission
1743 BmNP03_FL5_I15
820bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (74%/224)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
GO:0000028 P ribosomal small subunit assembly
1744 BmNP03_FL5_I16
836bp
unknown/Bm_scaf16420_contig61630
691bp
UniRef50_Q868Q4 (51%/225)
Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep: Reverse transcriptase - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
1745 BmNP03_FL5_I17
881bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/159)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
1746 BmNP03_FL5_I18
891bp
unknown/Bm_scaf23448_contig68658
645bp
UniRef50_Q9XXW0 (74%/156)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
1747 BmNP03_FL5_I19
1496bp
unknown/
0bp
(no hit)
1748 BmNP03_FL5_I20
1722bp
unknown/
0bp
UniRef50_A6PV85 (42%/267)
Cluster: Chromosome segregation ATPases-like protein; n=2; Victivallis vadensis ATCC BAA-548|Rep: Chromosome segregation ATPases-like protein - Victivallis vadensis ATCC BAA-548
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006334 P nucleosome assembly
1749 BmNP03_FL5_I21
834bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q4S3I4 (33%/92)
Cluster: Chromosome 1 SCAF14749, whole genome shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 1 SCAF14749, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
1750 BmNP03_FL5_I22
832bp
unknown/Bm_scaf15533_contig60743
698bp
UniRef50_Q9XXW0 (82%/136)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
1751 BmNP03_FL5_I23
876bp
chromo4/Bm_scaf130
668521bp
UniRef50_P39023 (39%/197)
Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1752 BmNP03_FL5_I24
902bp
chromo10/Bm_scaf10
7317751bp
UniRef50_UPI000051ACE1 (51%/84)
Cluster: PREDICTED: similar to vasa intronic gene CG4170-PA, isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to vasa intronic gene CG4170-PA, isoform A - Apis mellifera
GO:0016246 P RNA interference
GO:0016442 C RISC complex
1753 BmNP03_FL5_J01
848bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (30%/90)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
1754 BmNP03_FL5_J02
858bp
chromo24/Bm_scaf107
1152854bp
UniRef50_P05141 (75%/135)
Cluster: ADP/ATP translocase 2; n=61; Eukaryota|Rep: ADP/ATP translocase 2 - Homo sapiens (Human)
GO:0005215 F transporter activity
GO:0005488 F binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015207 F adenine transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0000002 P mitochondrial genome maintenance
GO:0006091 P generation of precursor metabolites and energy
GO:0006839 P mitochondrial transport
GO:0005471 F ATP:ADP antiporter activity
GO:0005515 F protein binding
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006915 P apoptotic process
1755 BmNP03_FL5_J03
868bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (29%/122)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
1756 BmNP03_FL5_J04
840bp
chromo2/Bm_scaf27
4962828bp
UniRef50_UPI00015B4C48 (72%/162)
Cluster: PREDICTED: similar to cullin 1; n=2; Apocrita|Rep: PREDICTED: similar to cullin 1 - Nasonia vitripennis
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0006512 P obsolete ubiquitin cycle
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0008629 P intrinsic apoptotic signaling pathway
1757 BmNP03_FL5_J05
847bp
unknown/Bm_scaf26660_contig71870
625bp
UniRef50_Q9XXW0 (63%/272)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
1758 BmNP03_FL5_J06
905bp
chromo16/Bm_scaf4
9119588bp
UniRef50_UPI00005A4873 (77%/256)
Cluster: PREDICTED: similar to sno, strawberry notch homolog 1 isoform 6; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to sno, strawberry notch homolog 1 isoform 6 - Canis familiaris
GO:0000003 P reproduction
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0007276 P gamete generation
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040010 P positive regulation of growth rate
GO:0040035 P hermaphrodite genitalia development
1759 BmNP03_FL5_J07
853bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (32%/46)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
1760 BmNP03_FL5_J08
846bp
unknown/
0bp
UniRef50_Q6AW70 (72%/212)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
GO:0019012 C virion component
1761 BmNP03_FL5_J09
845bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (66%/260)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
GO:0000028 P ribosomal small subunit assembly
1762 BmNP03_FL5_J10
869bp
unknown/
0bp
UniRef50_P03038 (86%/94)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
1763 BmNP03_FL5_J11
849bp
unknown/Bm_scaf7248_contig52458
844bp
UniRef50_Q9XXW0 (55%/201)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
1764 BmNP03_FL5_J12
892bp
unknown/
0bp
UniRef50_Q6AW70 (80%/175)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
1765 BmNP03_FL5_J13
808bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (75%/208)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
1766 BmNP03_FL5_J14
844bp
unknown/Bm_scaf791
9086bp
UniRef50_A5PLD0 (89%/55)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0016491 F oxidoreductase activity
GO:0050381 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
1767 BmNP03_FL5_J15
847bp
chromo11/Bm_scaf24
5118123bp
UniRef50_Q6P404 (75%/182)
Cluster: DEAH (Asp-Glu-Ala-His) box polypeptide 38; n=19; Eukaryota|Rep: DEAH (Asp-Glu-Ala-His) box polypeptide 38 - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0000398 P mRNA splicing, via spliceosome
GO:0004004 F RNA helicase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
1768 BmNP03_FL5_J16
848bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/122)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
1769 BmNP03_FL5_J17
850bp
chromo21/Bm_scaf7
8313734bp
UniRef50_Q6NP10 (65%/155)
Cluster: LD13390p; n=7; Eukaryota|Rep: LD13390p - Drosophila melanogaster (Fruit fly)
GO:0006807 P nitrogen compound metabolic process
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0003824 F catalytic activity
GO:0003837 F beta-ureidopropionase activity
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1770 BmNP03_FL5_J18
968bp
unknown/
0bp
UniRef50_Q6AW70 (82%/203)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
previous next from show/20736

- SilkBase 1999-2023 -