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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14578_c0_seq5
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		Single-strand_selective_monofunctional_uracil_DNA_glycosylase_[Operophtera_brumata]
Ontology
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0031981 C nuclear lumen
Transcript
Level		FPKM:1.53 TPM:1.65
ORF EntryO_BomoOtmSK13173_complete:A_BomoOtmSK_comp14578_c0_seq5
Sequence
(Nucleotide)
AACTACTACTACTGAAAATGTTAGTGTTTTTAAAAAATCACAGAATCTGTATTCTGTACA
CTACTTTGTCATATTCATCATCTTAATATTTTTATGAATTAGGTGAGAATTAAGTGAAAT
AAATACCGTATTGTTTAACAACACCAAACATGACGGAACCGTGTGTTGTTTCCTCATTCT
TTTCGGAACCCAAAACTAACAAACATAGTACTATTGCCGAAGATTTTTTATTTTATATTG
ATGAATTAAATCAGCAACTAGATGATTTTAAAACACCAGCCTCCGTCCAATGTGTTTATA
ATCCTACTAAATATGCTCGAGAATGTTTCGAAACGTATGTAAAAAAATATTGCAATACAA
AAAAGCGTATTATGTACTTTGGTATGAATCCAGGACCCTGGGGAATGTCACAAACTGGAG
TAAGATAAGAATACTGCGTTTTAGTAGTGCATGCATGTTTCACTATCTGTAAGTAGATTA
AGTAATTTTACATGAGTGTACCAGGCTCATCACAAACCGGGAGTAGTGGCGATTGCTCGT
GAGGCGCCTAACGTCTGCAATGGTACTGACTGACAACCAAGACCACTGAAAAGGATAGTA
CAACAAAAAAGTAGATTAAAGTAGAGCTAGGGTAGCATCTGGTTCCTTGCAGGTTCCATT
TGGTGAAATTTCTTCAGTCAGAGATTGGCTGGGTATAAAAGGCTCTGTTGGCAAACCTCC
ACTGGAAATTAAGTCTAGACCAGTTAATGGATTTGATTGTAAAAGAACTGAAGTAAGTGG
GAAACGATTCTGGGGATTGTTCAAGAATTTATGTGGAGAACCAAACAAATTTTTTGAATC
TAGTTTTGTATATAATTATTTACCAGAACAATGGATGAAGAATAATGGATGCAATTTGAC
TCCTGGTGATTTCAAGGCCGCAGAAATAGATTCATTATATCACATATGTGATCCAATATT
CAAAAAAGTTCTCGAACTTTATGATGTACACATCATAGTGGCGATTGGAAAATTTTGCGA
ATTACGCGCACAAAAAATTCTGGACAAGTATTCATTTCGAAATAAAATACAGGTAATATA
CATGCCACATCCAAGTCCAAGAGCTGTAAACAATAATAACTGGGACGACAAAGCACTTCA
CTGTTTAAAAGAAAACAATTTATTGCACTTTTATCAAGGATTTGCTTGAAATTGTATCGT
TAAAAGATTAAGTCGAATATGGTTGATCATATGAGAAGGTGTCTTGAATTAGCAGCTGAA
GCTCTGGCTCTTAAAGAGGTGCCTGTTGGTTGTGTATTCACAGTTAACGGACAAATTATT
GCAGAATCAAAAAACAGTGTAAACGCCACACACAACCCAACTAGACATGCGGAAATCAAC
TGCATTGATCAAATTCTAGAATACTGTAGATTAAACAACATCGATTACAAGCTATATTTC
AAGAACGTAATTGTGTATGTGACCGTTGAACCGTGCATAATGTGCGCGGCAGCGCTCAAC
AATCTAAACATCCGTGAGGTGGTATATGGTTGCCCCAATGACAGGTTTGGCGGAAATACC
GTTTTAGATGTCAGTAACTTTTATGAACAAAATTATATTTTAAATGGAAACTTGTTGGCA
GATGAAGCTATGATGTTGCTCAAAGAGTTTTATAAAGGGATAAACCCTAATGCCCCTGAA
TCAAAAGTGAAGAAAGATAAGAAAGTTTAATTTAATTAAAATATTGTCGAAGACTTCCTA
AAGTGAAGAAAAGTATAATTTAAACGTAGAGAATTATACAATATTAGTCTATTAATGATT
GTCCACATAAAACTACAGCATGTTTTGTTTAAATTGAAGTTGAGATTACTGTAGTCACCA
AACTGATTTTTTTAGTGTATATGATCTGATTTTTTTAATGTACATGCACAATACAAGTAA
TTACTGTGAGTTCACTATTTATCAAAAGTATTAAAAAGGCTCATTTGATTTTTGTAAGAT
AAATCCTTATCATGTTGATACTGATTATACAAATATAAGTGATATACTGTTGGTACTATG
TTTAAATCCCCATTATCAATTTATATACATAAACCACTGACAGCTTACCATAAGCATTAC
TTTAAGTATGTATAATTAAGATAGGAAGTTTTCTGAGCTCACACAGATAGGCACCATTCT
AACTGTTCCTGTCATTAGTCCATTCCAGGTAAATGATGGATAGATCCTCAGTCGAATGGC
TCGGTAATGCAGTAGTTAGCCTATGGTAGCAGCCTAACAGGGTAAAGCTCCGATCAACAA
TTGTAACTAGATAA
(2294 bp)

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