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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14129_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		long-chain-fatty-acid--CoA_ligase_5_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
Transcript
Level		FPKM:0.85 TPM:0.92
ORF EntryO_BomoOtmSK11943_3prime_partial:A_BomoOtmSK_comp14129_c0_seq1
Sequence
(Nucleotide)
GGGCTCAGCTGGTGCTCTGGCTTTGACCGGGGTCGCAGCCGCATCGGCCTTCTATCTAAG
TACACGACCGAAACCAGAGAAACCACTCGTGACGCTACACGAACAGAGCCTCCTGGAGTC
TGGACCTGAGATGGTTCGTGTTTCGAAATTCTACAAAGACGCGAAGAACGGACGTTTCCT
ACGATATCTTCACGAGGATACACGCACACTTTACGACACTTTCCGACGAGGCGTAAAAGA
GTCGAACAATGGCAACTGTTTGGGTTGGCGCGAGGGTCCGAACAAGCCTTACGTTTGGCA
GACATATAATGAGACTCTACTGCGCGCAAAGAATTTTGGTTCCGGTCTGCTCTGTCAAGG
TCTCATTCCCGGTCAGACTACATTTGTCGGTATTTATTCGCAGAATTGTCCTGAATGGAT
TATGACCGAACAGGCGGCGTATTGTTATTCGATGGTTATAGTTCCGTTGTATGATACGCT
AGGAGCGAACGCTTGTGCCTTCATTGTTAACCAAACTGAAATGGCTGTAGTAATTTGTGA
AGACGACAAAAAAGCCAATCTCCTACTGGATCAGTCGCCTCGATGCCTCAGAAAACTGAT
TACAATTAAGGAAGTATCGCCGTCTACATTTCAACGCGCCAAGAGCCGTGGTGTTGAGAT
TTTGAAGTTCTCTGACGTCGAAATACAGGGAGCTCAAAAGGACCATCCTTTTGTCCCACC
GAAACCGGAAAACCTTTGTACAATATGTTATACGTCCGGAACGACTGGGATGCCTAAAGG
CGTTATGCTGACTCACGAGAACGTTGTAGCTTCGATGTGCAGCGTTACGATGCAACTCGG
CGAGCATCGACCCACCAAGAACGACATCATGATCTCCTTCCTGCCTTTAGCTCACATGCT
GGAGCGATGCTGCGAGAATGCTCTCTACATGGTGGGAGGAGCCGTTGGTTTCTACAGTGG
CGATATAAGGAGGCTGGGCGATGACCTCACCGCTCTTAAGCCGACCATGATGCCGGCTGT
TCCACGTCTCCTGAACAGACTGTACGACAAAGCCCAGACTGAGATCGCCAACTCGAAAAT
CAAGAAATTACTTTTCAACATGGCGCTATCCGCAAAAGAATCGGAGTTGAAGAGAGGAAT
AGTTCGTGCTGACTCGATATGGGACAAGTTAGTTTTCCGCAAGGTTCGAGAAGGTATGGG
AGGACGACTTCGGATAATGGTCGTCGGATCAGCGCCTTTAGCAGGAAACGTACTGACTTT
CGCGAGATGCGCCCTCGGTTGTTTGATCGTGGAAGGCTACGGTCAGACGGAGTGCACTGC
GCCGGTGACGCTAACAGTTCAGGGAGATCATGTTCCTGAACACGTCGGCCCTCCTGTCGC
TTGTTGTAAAGTGAAGCTAGTGGACGTGCCCGAAATGGAGTACTATGCGGCGCAGGGCCA
AGGTGAGGTTTGCGTGCAGGGAGCTAACGTCTTCAAAGGATACTTCAAGGACGCGGAGAA
AACCAGAGAGGTCATCGACCAAGACGGATGGCATCACACCGGCGATGTCGGCAAGTGGTT
ACCTAACGGTACCCTGAAAATAATCGACAGAAGAAAACACATTTTCAAATTGTCACAAGG
CGAATATATAGTTCCTGAGAAAATTGAAAACATTTACATTAGAAGTCAGTACGTTGAGCA
AGTCTTTGTTCACGGTGAATCATTGAAGTCCTGCGTGGTCGCCATAGTTGTACCGGACGT
GGATGTCGTTAAATGCTGGGCTTTAGAATACGGTATCAAAGGAACCTTCTCATCTCTGTG
CGAGGATGAACGAGTGAAGAAGGTCATCATGGAGGACATGCTTCAGTGGGGCAGGAACGC
TGGCCTGAAAACTTTTGAACAGGTAAAAGATATATACTTGCATCCGGATCCGTTTTCGGT
ACAGAACGGCCTACTGACGCCAACGATGAAGGCAAAGAGACCAGAAATACGAAGTTATTT
CAAACCGCAAATAGAGGACATGTACAAGCAACTTGAATAACGGTAGCGAGCACAATGCAC
TAATTAAACTGTAGAGGCATGTTGTTTGACGGAGACGAACTTTAGTGGATGGCTGTAATA
TTGTAATTGTTGATGAATACTCGTACACACTTTGAATTCGATGGAAGAAGTAAATTCGAT
AACGCAATGTAATTTGTAATGAATGATGAGTGAATAAGTTGGGAATTTGTGATTTAAAAA
AAAAAAAACGAAGCTTGAGCAATGTGGGGTTGTTTATCTTATTTCGTTGTATGTTTATAC
GTGAGTCGACTATTATCAAAGCCAGCAATGTGACTTTTGGACAATTAATGGTAAATCAGA
AAAACGAATTAT
(2352 bp)

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