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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000025-TA|BGIBMGA000025-PA|undefined
         (479 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962...    37   0.031
07_01_0376 + 2815419-2815755,2815912-2817659                           36   0.094
08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391     35   0.12 
08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651           34   0.22 
05_04_0185 - 18857229-18857638,18858347-18858424,18858758-18859931     34   0.29 
05_04_0111 - 18079051-18079970,18080384-18080462                       34   0.29 
06_01_0223 - 1709897-1709912,1710188-1712520                           33   0.38 
05_04_0089 - 17821196-17821306,17821611-17821688,17821801-178218...    33   0.38 
12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316...    32   0.87 
07_01_0828 - 6679393-6680432,6680448-6680784                           31   1.5  
01_07_0167 - 41613834-41613842,41614060-41615056,41615456-416163...    31   1.5  
08_02_1027 + 23749400-23750698                                         31   2.0  
01_06_0394 - 28977800-28978135,28978222-28978494,28978603-289790...    31   2.0  
01_06_1320 + 36272716-36273339,36274222-36275762,36276349-362764...    31   2.7  
05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885...    30   4.7  
05_01_0146 - 953957-956278,956468-956786,957185-957213                 29   6.2  
04_03_0598 - 17826167-17826213,17826691-17826837,17827793-17828744     29   6.2  
03_02_0112 + 5689439-5689474,5689629-5689778,5690194-5690361,569...    29   6.2  
07_03_1329 + 25844335-25845000                                         29   8.1  
04_03_0963 + 21285160-21285579,21286585-21286635,21287017-212875...    29   8.1  
04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738     29   8.1  

>04_03_0024 -
           9623178-9624001,9624502-9624678,9625144-9625305,
           9625520-9626032,9626801-9629153
          Length = 1342

 Score = 37.1 bits (82), Expect = 0.031
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 9/128 (7%)

Query: 3   LKKQTSRWTGYRKAQWP-IENHTLILMYILLFAARFNC-QDLSI----NEETKNNTVDIN 56
           LK+    +    K +WP I N  L     L    +    +D+++    N+ETK   +   
Sbjct: 327 LKEINEEYNNSMKCEWPKIRNKELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRK 386

Query: 57  KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115
           + D H  E  N+  ++S++      + +  LE+  E+  L+N+ M  +EN IDN   Y +
Sbjct: 387 EQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENIENEIDNAEQYND 444

Query: 116 RIKIIDGV 123
            I  +D V
Sbjct: 445 FINTLDEV 452


>07_01_0376 + 2815419-2815755,2815912-2817659
          Length = 694

 Score = 35.5 bits (78), Expect = 0.094
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 3   LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56
           LK+    +    K +WP      +  Y  L   +     +D+++    N+ETK   +   
Sbjct: 275 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRK 334

Query: 57  KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115
           + D H  E  N+  ++S++      + +  LE+  E+  L+N+ M  +EN IDN   Y +
Sbjct: 335 EQDKHGKEEQNLGKILSEEEQWAKNERL-FLESYEEEINLINE-MENIENEIDNAEQYND 392

Query: 116 RIKIIDGV 123
            I  +D V
Sbjct: 393 FINTLDEV 400


>08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391
          Length = 818

 Score = 35.1 bits (77), Expect = 0.12
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 3   LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56
           LK+    +    K +WP      +  Y  L   +     +D+++    N+ETK   +   
Sbjct: 322 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVKIFKNQETKIEQIKRK 381

Query: 57  KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115
           + D H  E  N+  ++S++      + +  LE+  E+  L+N+ M  +EN IDN   Y +
Sbjct: 382 EQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENIENEIDNTEQYND 439

Query: 116 RIKIIDGV 123
            I  +D V
Sbjct: 440 FINTLDEV 447


>08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651
          Length = 642

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 3   LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56
           LK+    +    K +WP      +  Y  L   +     +D+++    N+ETK   +   
Sbjct: 148 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRK 207

Query: 57  KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115
           + D H  E  N+  ++S++      + +  LE+  E+  L+N+ M  +EN IDN   Y +
Sbjct: 208 EQDKHGKEEQNLCKILSEEEQWAKNERL-FLESYEEEINLINE-MENIENEIDNAEQYND 265

Query: 116 RIKIIDGV 123
            I  +D V
Sbjct: 266 FINTLDEV 273


>05_04_0185 - 18857229-18857638,18858347-18858424,18858758-18859931
          Length = 553

 Score = 33.9 bits (74), Expect = 0.29
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 45  NEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYV 104
           N+ETK   +   + D H  E  N+  ++S++      + +  LE+  E+  L+N+ M  +
Sbjct: 8   NQETKIEQIKRKEQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENI 65

Query: 105 ENLIDNVLNY-ERIKIIDGV 123
           EN IDN   Y + I  +D V
Sbjct: 66  ENEIDNAEQYNDFINTLDEV 85


>05_04_0111 - 18079051-18079970,18080384-18080462
          Length = 332

 Score = 33.9 bits (74), Expect = 0.29
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 3   LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56
           LK+    +    K +WP      +  Y  L   +     +D+++    N+ETK   +   
Sbjct: 189 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRI 248

Query: 57  KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115
           + D H  E  N+  ++S++      + +  LE+  E+  L+N+ M  +EN IDN   Y +
Sbjct: 249 EQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENIENEIDNAEQYND 306

Query: 116 RIKIIDGV 123
            I  +D V
Sbjct: 307 FINTLDEV 314


>06_01_0223 - 1709897-1709912,1710188-1712520
          Length = 782

 Score = 33.5 bits (73), Expect = 0.38
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 45  NEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYV 104
           N+ETK   +   + D H  E  N+  ++S++      + +  LE+  E+  L+N+ M  +
Sbjct: 375 NQETKIEQIKRKEQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENI 432

Query: 105 ENLIDNVLNY 114
           EN IDN   Y
Sbjct: 433 ENEIDNAEQY 442


>05_04_0089 -
           17821196-17821306,17821611-17821688,17821801-17821863,
           17822167-17823021,17823121-17823236,17823930-17824004,
           17826156-17826213
          Length = 451

 Score = 33.5 bits (73), Expect = 0.38
 Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 9/93 (9%)

Query: 52  TVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLN-KTMGY----VEN 106
           T++++     S+  +N+   VS + P TL++   S E    ++ L+N + + Y    V+N
Sbjct: 319 TLNVSLESHFSSTETNV---VSSECPETLENTSPSKEFAILRDTLVNAENLHYVTDDVQN 375

Query: 107 LIDNVLNYE-RIKIIDGVEIKIKNDTKVVDKER 138
           L+  + N E +++  + V +K++ DT+   +ER
Sbjct: 376 LMTKLSNLEAKLEEAESVIVKLREDTRTTIRER 408


>12_02_0772 -
           23029703-23029715,23029835-23030463,23030637-23031673,
           23031830-23032166
          Length = 671

 Score = 32.3 bits (70), Expect = 0.87
 Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 3   LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56
           LK+    +    K +WP      +  Y  L   +     +D+++    N++TK   +   
Sbjct: 275 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNQQTKIEQIKRK 334

Query: 57  KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115
           + D H  E  N+  ++S++      + +  LE+  E+  L+N+ M  ++N IDN   Y +
Sbjct: 335 EQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENIKNEIDNAEQYND 392

Query: 116 RIKIIDGV 123
            I  +D V
Sbjct: 393 FINTLDEV 400


>07_01_0828 - 6679393-6680432,6680448-6680784
          Length = 458

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 3   LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56
           LK+    +    K +WP      +  Y  L   +     +D+++    N ETK   +   
Sbjct: 322 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNHETKIEQIKRI 381

Query: 57  KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115
           + D H  E  N+  ++S++      + +  LE+  E+  L+N+ M  ++N IDN   Y +
Sbjct: 382 EQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENIKNEIDNAEQYND 439

Query: 116 RIKIIDGV 123
            I  +D V
Sbjct: 440 FINTLDEV 447


>01_07_0167 -
           41613834-41613842,41614060-41615056,41615456-41616336,
           41616437-41616508,41616590-41616649,41616736-41616885,
           41616974-41617021,41617107-41617181,41617266-41617411,
           41617514-41617594,41617703-41617810,41618046-41618057,
           41618137-41618148,41618499-41618546,41619021-41619105
          Length = 927

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 10/130 (7%)

Query: 35  ARFNCQDLSINEETKNNT-VDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEK 93
           + F  +D  ++  T+N+  V++N  D +  E ++ N+L  D   +T+    +  ++V ++
Sbjct: 270 SHFTTKDNEVDMATENDDYVELNSDDENEQEGTS-NMLQQDSQINTITAIEQVEQHVGQE 328

Query: 94  EALLNKTMGYVENLIDNVLNYERI-KIIDGVEIKIKNDTKVVDKER-----KENNDIEEA 147
           E          E+  ++ +N E I   +   E    N   V+DK+      K+    EEA
Sbjct: 329 ETTSETKATSAED--NDTINEEDINNYLANEEDSQDNTPVVIDKKHIPCIGKKFRTHEEA 386

Query: 148 RGLFSKYTYE 157
           R  F+ Y Y+
Sbjct: 387 RSFFNFYAYQ 396


>08_02_1027 + 23749400-23750698
          Length = 432

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 64  ESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNYERIKI-IDG 122
           E+S +   +S+K  +TLQ  I+  E++   E+    ++G ++++ID + + E  K   + 
Sbjct: 324 ENSQLKEDISEKE-NTLQSIIQDYESLKVSESAAQSSIGELKDMIDAMFSSESTKTSAEA 382

Query: 123 VEIKIKNDTKVVDKERKENNDI 144
                K +    D ER +  DI
Sbjct: 383 SPRDTKGNEVYYDHERTQLEDI 404


>01_06_0394 -
           28977800-28978135,28978222-28978494,28978603-28979013,
           28979157-28979273
          Length = 378

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 26/224 (11%)

Query: 213 MFLPSILGSF-GKIL-GKGISHLSATSSQ---ASYPPANMDDTNAYNNDNKDFMGYETNP 267
           +FL  + GSF G++   K +  + + SS    +  PP  +D+TN   N  K F+   + P
Sbjct: 143 VFLSGVPGSFYGRLFPSKNVHFVCSFSSLHWLSQVPPGLLDETNGPVNKGKMFISSTSPP 202

Query: 268 TGTYAYPQDYATE---------GNDMEPGNIDMSRYGAGGPKVTYLPSKNSYYKNQMSTA 318
               AY + +  +            +  G + +S  G  G +  +     +   + +S +
Sbjct: 203 AVAAAYSRQFRRDFSLFLRSRAAEVVAGGRMVVSMLGREGER--HADRNTTLLWDLLSES 260

Query: 319 NNYKIFQKIPASSMILSNYDPFYSPLLSRLDGIFARLGLAPSE--NAVTDSPQMGGQSLS 376
               + Q +     + +   PFY+P +  ++    R G    E   A   S    G +  
Sbjct: 261 FAALVSQGVVEQGKVDAYDAPFYAPSIGEIEEEVRRQGSFRMEVARAYEASLSGSGDARK 320

Query: 377 D-----MKLEACREQLICLMYAN---PAKYAPYSNLVSAQLSRE 412
           D     M + A +E ++   +      A +A Y+ LV+A + RE
Sbjct: 321 DGRTVSMAVRAIQESMLGHHFGTEIVDALFAKYTELVTATMERE 364


>01_06_1320 +
           36272716-36273339,36274222-36275762,36276349-36276490,
           36276622-36276729,36276814-36277026,36277113-36277223,
           36278056-36278250,36278874-36279048,36279189-36279226
          Length = 1048

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 263 YETNPTGTYAYPQDYATEGNDMEPGNIDMSRYGAGGPKVTYLPSKNSYYKNQMSTANNYK 322
           Y+ +PT + A P     +  +++  N     YG GG  ++  P   S   N M + N   
Sbjct: 449 YQKSPTSSNASPGGSPAQHQNIDNINSAFLNYGLGGYPLS--PGLPSMMMNCMGSGNMPP 506

Query: 323 IFQKIPASSMILS 335
           +F+   A+S I S
Sbjct: 507 LFESAAAASAIAS 519


>05_07_0328 + 29286109-29286120,29286982-29287146,29288427-29288589,
            29288625-29288903,29289047-29289122,29289725-29289787,
            29292116-29292164,29292413-29292504,29293017-29293068,
            29293209-29293271,29293382-29293431,29293941-29294016,
            29294444-29294656,29294763-29294869,29294966-29295074,
            29295489-29295689,29295773-29296033,29296154-29296171,
            29296287-29296397,29296755-29297030,29297108-29297382,
            29297814-29298165,29298371-29298655,29298715-29299261,
            29301658-29301781,29301871-29301946,29302062-29302136,
            29302300-29302353,29302833-29302892,29302977-29303093,
            29303228-29303361,29303480-29303682,29303879-29303976,
            29304358-29304461,29304537-29304702,29304803-29304925,
            29305047-29305129,29305217-29305358,29305523-29305549,
            29305784-29305854,29305930-29306518
          Length = 2046

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 19/90 (21%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 79   TLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNYERIKIIDGVEIKIKNDTKVVDKER 138
            +L D ++ L+ ++  E +L  T G ++      L   R+KI++ + + +   ++  ++E 
Sbjct: 1578 SLGDLLKLLD-ISSAENVLPTTYGCLQP----PLGKHRLKIVEFISVLLTIGSETAEQEL 1632

Query: 139  KENNDIEEARGLFSKYTYEYRLYQKIKSFI 168
               + ++ +  LF +Y Y   L+  ++S I
Sbjct: 1633 INQSAVKRSIDLFFQYPYNNFLHHHVESII 1662


>05_01_0146 - 953957-956278,956468-956786,957185-957213
          Length = 889

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 18/61 (29%), Positives = 30/61 (49%)

Query: 46  EETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVE 105
           EE ++   DI + +  S E  +   L  DKA  +LQD    L+   E++  L + + Y E
Sbjct: 580 EECESKETDIVRLNKQSEEEISALQLEVDKAVESLQDAEHQLQVANEEKEKLQERLVYTE 639

Query: 106 N 106
           +
Sbjct: 640 S 640


>04_03_0598 - 17826167-17826213,17826691-17826837,17827793-17828744
          Length = 381

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query: 423 NPEILRFFKYMRAARRGQEGVDCVTLHPGCSTSTPTHTMI 462
           NP IL        A+R   G  C++ +  C TS PT T +
Sbjct: 306 NPYILDGCSPNNDAKRNSSGYACISTNSECITSKPTDTFV 345


>03_02_0112 +
           5689439-5689474,5689629-5689778,5690194-5690361,
           5691334-5691458,5691914-5692007,5692844-5692942,
           5693730-5693910,5694051-5694166,5694758-5694913,
           5695226-5695354,5695554-5695718
          Length = 472

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 96  LLNKTMGYVENLIDNVLNYERIKIIDGVEIKIKNDTKVVDKERKE 140
           LLN+T+G ++    + L ++ I   DG+ +K  N   +VDK + +
Sbjct: 287 LLNRTLGLLKKNCKSTLAFDSIAAADGISLK-DNVENLVDKAKDQ 330


>07_03_1329 + 25844335-25845000
          Length = 221

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 79  TLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNYERIKIIDGVEIKIKNDTKVVDKER 138
           TL+     +  V E  A L+KT+G   N+ID+    E I + D     +K   +  DK  
Sbjct: 102 TLESSDGEVVKVKEASARLSKTIG---NIIDDGRGDEAIPLPDVSYKTLKKVVEYCDKHA 158

Query: 139 KENNDIEEAR 148
            E +D +E +
Sbjct: 159 DEKSDTDEQK 168


>04_03_0963 +
           21285160-21285579,21286585-21286635,21287017-21287502,
           21287866-21287961
          Length = 350

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 72  VSDKAPSTLQDFIRSL--ENVTEKEALLNKTMGYVENLIDNVLNYERIK 118
           +  K  + ++ F  SL  +++T+K +++ + +GY++ L D V   E IK
Sbjct: 137 IPGKVANAIEKFYISLIYQDLTDKASIVGEAIGYIKTLEDVVQKLETIK 185


>04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738
          Length = 707

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 10/170 (5%)

Query: 241 SYPPANMDDTNAYNNDNKDFMGYETNPTGTYAYP-QDYATEGNDMEPGNIDMSRYGAGGP 299
           SY P  + D+N +       + Y ++PT  Y          G  +   N   SR G    
Sbjct: 111 SYTPFMLSDSNKFTVVGCQSLAYISDPTSNYTSGCASSCPGGKVVSATNRTCSRIGC--C 168

Query: 300 KVTYLPSKNSYYKNQM-STANNYKIFQKIPASSMILSNYDPF---YSPLLSRLDGIFARL 355
           ++T +P    + K     + N   I++  P S   + +Y  F    S L S L+      
Sbjct: 169 QIT-IPRGMEFCKVSFGESMNTSGIYEHTPCSYAAIMDYSNFTFSTSNLTSLLEFNNTYS 227

Query: 356 GLAPSE-NAVTDSPQMGGQSLSDMKLEACR-EQLICLMYANPAKYAPYSN 403
           G AP + +     P+   ++  ++   AC+ +  +CL Y++ AK A   N
Sbjct: 228 GRAPVKFDWAIWGPRDCVEAQKNLTSYACKSDHSVCLNYSSGAKSAYMCN 277


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.133    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,504,272
Number of Sequences: 37544
Number of extensions: 563618
Number of successful extensions: 1378
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1375
Number of HSP's gapped (non-prelim): 22
length of query: 479
length of database: 14,793,348
effective HSP length: 85
effective length of query: 394
effective length of database: 11,602,108
effective search space: 4571230552
effective search space used: 4571230552
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)

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