GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000007-TA|BGIBMGA000007-PA|undefined
         (92 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription fact...    21   5.5  

>AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription
          factor zen protein.
          Length = 52

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 2/24 (8%)

Query: 19 RPR--PMRRKMVLKHRRMKAFFNN 40
          RPR   + RK+ L  R++K +F N
Sbjct: 27 RPRRIELTRKLALTERQIKIWFQN 50


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.329    0.139    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,903
Number of Sequences: 2123
Number of extensions: 2222
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 1
length of query: 92
length of database: 516,269
effective HSP length: 54
effective length of query: 38
effective length of database: 401,627
effective search space: 15261826
effective search space used: 15261826
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 41 (20.6 bits)