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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000029-TA|BGIBMGA000029-PA|IPR002415|High mobility
group-like nuclear protein, IPR004038|Ribosomal protein
L7Ae/L30e/S12e/Gadd45, IPR004037|Ribosomal protein L7AE
         (156 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023752-1|AAZ41760.1|  160|Drosophila melanogaster RH66170p pro...   165   2e-41
AF217228-1|AAF27630.1|  160|Drosophila melanogaster nucleolar pr...   165   2e-41
AE014296-2434|AAF49701.1|  160|Drosophila melanogaster CG5258-PA...   165   2e-41
AF208396-1|AAF20209.1|  127|Drosophila melanogaster Hoi-polloi p...    62   3e-10
AE014134-1677|AAF52798.2|  127|Drosophila melanogaster CG3949-PA...    62   3e-10
X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...    42   5e-04
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...    42   5e-04
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...    42   5e-04
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...    42   5e-04
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...    42   5e-04
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   2.1  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   2.1  
BT010021-1|AAQ22490.1| 1007|Drosophila melanogaster RE09305p pro...    29   3.8  
AE014297-4480|AAF56967.2| 1007|Drosophila melanogaster CG31036-P...    29   3.8  
U22295-1|AAB03641.1|  622|Drosophila melanogaster unknown protei...    28   5.0  
AE014298-480|AAF45836.2|  826|Drosophila melanogaster CG32793-PA...    28   5.0  
U22182-2|AAB03639.1|  791|Drosophila melanogaster unknown protein.     28   6.6  
AL031366-4|CAA20518.1|  773|Drosophila melanogaster EG:100G7.2,F...    28   6.6  
BT012478-1|AAS93749.1|  341|Drosophila melanogaster RE15368p pro...    27   8.7  
BT001612-1|AAN71367.1|  460|Drosophila melanogaster RE32823p pro...    27   8.7  
AF148814-1|AAF26671.1|  431|Drosophila melanogaster translation ...    27   8.7  
AF148813-1|AAF26670.1|  360|Drosophila melanogaster translation ...    27   8.7  
AE014297-4355|AAN14165.1|  431|Drosophila melanogaster CG11901-P...    27   8.7  
AE014297-4354|AAF56877.2|  431|Drosophila melanogaster CG11901-P...    27   8.7  

>BT023752-1|AAZ41760.1|  160|Drosophila melanogaster RH66170p
           protein.
          Length = 160

 Score =  165 bits (402), Expect = 2e-41
 Identities = 81/161 (50%), Positives = 109/161 (67%), Gaps = 6/161 (3%)

Query: 1   MGKVKQEPVEQEDQA-----DVSIKAEPQSHDEKVEHCSIIAKPMAXXXXXXXXXXXXXX 55
           MGKVK E  E  D++     DV+IK E +S+D+K+   + IAKPMA              
Sbjct: 1   MGKVKVERSEDADESVVASGDVTIKEE-ESYDDKLIFVNAIAKPMAGKKLAKKCYKLVKK 59

Query: 56  SSNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRK 115
           +  HK ++RNGLK VQ +LR GE G+  FAGD++P++IMCHLPAVCEEK + Y YTPSR 
Sbjct: 60  AMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119

Query: 116 DIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 156
           D+GAAMG  RG + +LV+++E+YKDLY+EVK E+  L  P+
Sbjct: 120 DLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEELSALNIPV 160


>AF217228-1|AAF27630.1|  160|Drosophila melanogaster nucleolar
           protein NHP2 protein.
          Length = 160

 Score =  165 bits (402), Expect = 2e-41
 Identities = 81/161 (50%), Positives = 109/161 (67%), Gaps = 6/161 (3%)

Query: 1   MGKVKQEPVEQEDQA-----DVSIKAEPQSHDEKVEHCSIIAKPMAXXXXXXXXXXXXXX 55
           MGKVK E  E  D++     DV+IK E +S+D+K+   + IAKPMA              
Sbjct: 1   MGKVKVERSEDADESVVASGDVTIKEE-ESYDDKLIFVNAIAKPMAGKKLAKKCYKLVKK 59

Query: 56  SSNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRK 115
           +  HK ++RNGLK VQ +LR GE G+  FAGD++P++IMCHLPAVCEEK + Y YTPSR 
Sbjct: 60  AMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119

Query: 116 DIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 156
           D+GAAMG  RG + +LV+++E+YKDLY+EVK E+  L  P+
Sbjct: 120 DLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEELSALNIPV 160


>AE014296-2434|AAF49701.1|  160|Drosophila melanogaster CG5258-PA
           protein.
          Length = 160

 Score =  165 bits (402), Expect = 2e-41
 Identities = 81/161 (50%), Positives = 109/161 (67%), Gaps = 6/161 (3%)

Query: 1   MGKVKQEPVEQEDQA-----DVSIKAEPQSHDEKVEHCSIIAKPMAXXXXXXXXXXXXXX 55
           MGKVK E  E  D++     DV+IK E +S+D+K+   + IAKPMA              
Sbjct: 1   MGKVKVERSEDADESVVASGDVTIKEE-ESYDDKLIFVNAIAKPMAGKKLAKKCYKLVKK 59

Query: 56  SSNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRK 115
           +  HK ++RNGLK VQ +LR GE G+  FAGD++P++IMCHLPAVCEEK + Y YTPSR 
Sbjct: 60  AMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119

Query: 116 DIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 156
           D+GAAMG  RG + +LV+++E+YKDLY+EVK E+  L  P+
Sbjct: 120 DLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEELSALNIPV 160


>AF208396-1|AAF20209.1|  127|Drosophila melanogaster Hoi-polloi
           protein.
          Length = 127

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 61  NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAA 120
           N +R G     K L  G   +V  AGD  PIEI+ HLP +CE+K+V Y +  S++ +G A
Sbjct: 32  NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91

Query: 121 MGTMRGCI--MVLVKEHEDYKDLYEEVKSEIKLL 152
            G  R  +   V   E    K     ++ EI+ L
Sbjct: 92  CGVSRPIVACSVTTNEGSQLKSQITSIQQEIERL 125


>AE014134-1677|AAF52798.2|  127|Drosophila melanogaster CG3949-PA
           protein.
          Length = 127

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 61  NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAA 120
           N +R G     K L  G   +V  AGD  PIEI+ HLP +CE+K+V Y +  S++ +G A
Sbjct: 32  NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91

Query: 121 MGTMRGCI--MVLVKEHEDYKDLYEEVKSEIKLL 152
            G  R  +   V   E    K     ++ EI+ L
Sbjct: 92  CGVSRPIVACSVTTNEGSQLKSQITSIQQEIERL 125


>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 17/58 (29%), Positives = 30/58 (51%)

Query: 61  NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 118
           +Y+  G   V K +   +  +V  A D+ P+E++  LPA+C +  V YC    +  +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 17/58 (29%), Positives = 30/58 (51%)

Query: 61  NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 118
           +Y+  G   V K +   +  +V  A D+ P+E++  LPA+C +  V YC    +  +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 17/58 (29%), Positives = 30/58 (51%)

Query: 61  NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 118
           +Y+  G   V K +   +  +V  A D+ P+E++  LPA+C +  V YC    +  +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 17/58 (29%), Positives = 30/58 (51%)

Query: 61  NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 118
           +Y+  G   V K +   +  +V  A D+ P+E++  LPA+C +  V YC    +  +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 17/58 (29%), Positives = 30/58 (51%)

Query: 61  NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 118
           +Y+  G   V K +   +  +V  A D+ P+E++  LPA+C +  V YC    +  +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 1     MGKVKQEPVEQEDQADVSIKAEPQSHDEKVEHCSIIAKP 39
             +GK K++P E+E   +V++K  PQ   E  E   +  KP
Sbjct: 13079 LGKGKKKPKEEEAPENVTLKNIPQKPQEVEEEVELKQKP 13117


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 1     MGKVKQEPVEQEDQADVSIKAEPQSHDEKVEHCSIIAKP 39
             +GK K++P E+E   +V++K  PQ   E  E   +  KP
Sbjct: 14938 LGKGKKKPKEEEAPENVTLKNIPQKPQEVEEEVELKQKP 14976


>BT010021-1|AAQ22490.1| 1007|Drosophila melanogaster RE09305p
           protein.
          Length = 1007

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 5   KQEPVEQEDQADVSIKAEPQSHDEKVEHCSIIAKPM 40
           KQ PV+Q+ +     +  PQ+H + + H    ++P+
Sbjct: 305 KQPPVQQQQEQQQGAQPPPQTHPQSLPHSQSQSQPL 340


>AE014297-4480|AAF56967.2| 1007|Drosophila melanogaster CG31036-PA
           protein.
          Length = 1007

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 5   KQEPVEQEDQADVSIKAEPQSHDEKVEHCSIIAKPM 40
           KQ PV+Q+ +     +  PQ+H + + H    ++P+
Sbjct: 305 KQPPVQQQQEQQQGAQPPPQTHPQSLPHSQSQSQPL 340


>U22295-1|AAB03641.1|  622|Drosophila melanogaster unknown protein
           protein.
          Length = 622

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 5   KQEPVEQEDQADVSIKAEPQSHDEKVE 31
           K+EP ++E Q +   K EPQ  + KVE
Sbjct: 584 KEEPQKEEPQKEEPQKEEPQKEEPKVE 610


>AE014298-480|AAF45836.2|  826|Drosophila melanogaster CG32793-PA
           protein.
          Length = 826

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 5   KQEPVEQEDQADVSIKAEPQSHDEKVE 31
           K+EP ++E Q +   K EPQ  + KVE
Sbjct: 788 KEEPQKEEPQKEEPQKEEPQKEEPKVE 814


>U22182-2|AAB03639.1|  791|Drosophila melanogaster unknown protein.
          Length = 791

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 5   KQEPVEQEDQADVSIKAEPQSHDEKVE 31
           K+EP ++E Q +   K EPQ  + KVE
Sbjct: 753 KEEPRKEEPQKEEPQKEEPQKEEPKVE 779


>AL031366-4|CAA20518.1|  773|Drosophila melanogaster
           EG:100G7.2,FBgn0014097;anon-3Cb protein.
          Length = 773

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 5   KQEPVEQEDQADVSIKAEPQSHDEKVE 31
           K+EP ++E Q +   K EPQ  + KVE
Sbjct: 735 KEEPRKEEPQKEEPQKEEPQKEEPKVE 761


>BT012478-1|AAS93749.1|  341|Drosophila melanogaster RE15368p
           protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 3   KVKQEPVEQEDQADVSIKAEPQSHD 27
           K   EP E+ D AD ++ AEP+S D
Sbjct: 270 KKAAEPAEELDAADEALAAEPKSKD 294


>BT001612-1|AAN71367.1|  460|Drosophila melanogaster RE32823p
           protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 3   KVKQEPVEQEDQADVSIKAEPQSHD 27
           K   EP E+ D AD ++ AEP+S D
Sbjct: 279 KKAAEPAEELDAADEALAAEPKSKD 303


>AF148814-1|AAF26671.1|  431|Drosophila melanogaster translation
           elongation factor1 gamma protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 3   KVKQEPVEQEDQADVSIKAEPQSHD 27
           K   EP E+ D AD ++ AEP+S D
Sbjct: 250 KKAAEPAEELDAADEALAAEPKSKD 274


>AF148813-1|AAF26670.1|  360|Drosophila melanogaster translation
           elongation factor1 gamma protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 3   KVKQEPVEQEDQADVSIKAEPQSHD 27
           K   EP E+ D AD ++ AEP+S D
Sbjct: 179 KKAAEPAEELDAADEALAAEPKSKD 203


>AE014297-4355|AAN14165.1|  431|Drosophila melanogaster CG11901-PB,
           isoform B protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 3   KVKQEPVEQEDQADVSIKAEPQSHD 27
           K   EP E+ D AD ++ AEP+S D
Sbjct: 250 KKAAEPAEELDAADEALAAEPKSKD 274


>AE014297-4354|AAF56877.2|  431|Drosophila melanogaster CG11901-PA,
           isoform A protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 3   KVKQEPVEQEDQADVSIKAEPQSHD 27
           K   EP E+ D AD ++ AEP+S D
Sbjct: 250 KKAAEPAEELDAADEALAAEPKSKD 274


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.134    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,285,927
Number of Sequences: 52641
Number of extensions: 266384
Number of successful extensions: 891
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 845
Number of HSP's gapped (non-prelim): 42
length of query: 156
length of database: 24,830,863
effective HSP length: 79
effective length of query: 77
effective length of database: 20,672,224
effective search space: 1591761248
effective search space used: 1591761248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)

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