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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000026-TA|BGIBMGA000026-PA|undefined
         (431 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g35640.1 68417.m05061 serine O-acetyltransferase, putative si...    34   0.16 
At1g21310.1 68414.m02662 proline-rich extensin-like family prote...    33   0.28 
At5g25090.1 68418.m02973 plastocyanin-like domain-containing pro...    33   0.49 
At4g30870.1 68417.m04383 repair endonuclease family protein cont...    31   1.5  
At1g29170.1 68414.m03569 expressed protein ; expression supporte...    31   2.0  
At1g07310.1 68414.m00778 C2 domain-containing protein contains s...    31   2.0  
At3g63070.1 68416.m07084 PWWP domain-containing protein putative...    30   3.4  
At1g01810.1 68414.m00100 hypothetical protein                          30   3.4  
At5g54920.1 68418.m06840 expressed protein                             29   4.5  
At2g46250.1 68415.m05751 myosin heavy chain-related contains wea...    29   4.5  
At1g72890.1 68414.m08431 disease resistance protein (TIR-NBS cla...    29   4.5  
At1g71420.1 68414.m08249 pentatricopeptide (PPR) repeat-containi...    29   4.5  
At5g03320.1 68418.m00283 protein kinase, putative similar to ser...    29   6.0  
At4g11720.1 68417.m01870 hypothetical protein                          29   6.0  
At1g07520.1 68414.m00805 scarecrow transcription factor family p...    29   6.0  
At4g39450.1 68417.m05582 expressed protein                             29   7.9  
At2g47540.1 68415.m05933 pollen Ole e 1 allergen and extensin fa...    29   7.9  
At1g76930.2 68414.m08956 proline-rich extensin-like family prote...    29   7.9  
At1g76930.1 68414.m08955 proline-rich extensin-like family prote...    29   7.9  
At1g14260.2 68414.m01690 zinc finger (C3HC4-type RING finger) fa...    29   7.9  
At1g14260.1 68414.m01689 zinc finger (C3HC4-type RING finger) fa...    29   7.9  

>At4g35640.1 68417.m05061 serine O-acetyltransferase, putative
          similar to serine acetyltransferase, Arabidopsis
          thaliana, GI:905391; contains Pfam profile PF00132:
          Bacterial transferase hexapeptide (four repeats)
          Length = 355

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 38 LEGLGLDFQQDSSLIEAPSFLSSLFK-QDENDEGGGGLFEKIAQPLQGGTLNDIIVPVL 95
          + G   DF   SSL   P  +S  F  +D+ + G    FE+I      GTLN +  PVL
Sbjct: 4  INGENRDFSSSSSLSSLPMIVSRNFSARDDGETGDEFPFERIFPVYARGTLNPVADPVL 62


>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
           contains extensin-like region, Pfam:PF04554
          Length = 431

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 108 PMGLEALSLITLVPVMTRAIPGVIDYFFSKPQPTIQY--KPIHHFRPARPYH 157
           PM     +L+ L   +T       +YF+S P P +++   P+ H+ P   YH
Sbjct: 4   PMASLVATLLVLTISLTFVSQSTANYFYSSPPPPVKHYTPPVKHYSPPPVYH 55


>At5g25090.1 68418.m02973 plastocyanin-like domain-containing
           protein
          Length = 186

 Score = 32.7 bits (71), Expect = 0.49
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 214 KIYRQNNNNINLYAHKEPNRIRNKVVYKYEDEFKLLNQSTKPLRINQPNKLSRPGSAYRN 273
           KI    + ++N +A     R+ + +V+KY++E   + Q TK   IN     + P + Y N
Sbjct: 36  KIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYIN--CNTTNPAANYSN 93

Query: 274 TELKTKIFPNSPTKYFNKDSK 294
            + K K+  + P  +F   SK
Sbjct: 94  GDTKVKLERSGP-YFFISGSK 113


>At4g30870.1 68417.m04383 repair endonuclease family protein
           contains Pfam PF02732 : ERCC4 domain; similar to repair
           endonuclease (TIGR:At5g41150) [Arabidopsis thaliana]
          Length = 661

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 325 DIKDRLKTIADMSYKKVANRFKVQGDDGIGPFVLESSSTDDNTLPNNGNYKRNNSKRK 382
           D KD + T+ D+S  K   ++ V+   G     +ESS  +D  LP+N   K+ N K++
Sbjct: 50  DAKDPINTLKDLSQIKGFGKWMVKLMKGYFDTAVESSEQED--LPDNRAGKKANGKKR 105


>At1g29170.1 68414.m03569 expressed protein ; expression supported
           by MPSS
          Length = 1016

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 32  DRFVKILEGLGLDFQQDSSLIEAPSFLSSLFKQDENDEGGGGL 74
           D   +I+E LGL   + S ++EA S + +L ++    EG GG+
Sbjct: 321 DEKAEIVESLGLQTDEASEMVEANSVVDTLDEKPSYGEGIGGV 363


>At1g07310.1 68414.m00778 C2 domain-containing protein contains
           similarity to shock protein SRC2 [Glycine max]
           gi|2055230|dbj|BAA19769 ; contains Pfam profile
           PF00168:C2 domain
          Length = 352

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)

Query: 138 PQPTIQYKPIHHFRPARPYHHFAASNIRPSTVYPPSHISNIERPYKHRDWNQYNQVP-PN 196
           P P  Q +P+ ++   +  H+++     PS   PP   + I  P   RD+ +++Q P P+
Sbjct: 146 PPPRPQSQPLDYYSAPQGNHYYS-----PSPPPPPPPQAPITAPSPQRDYREFSQSPSPS 200

Query: 197 P 197
           P
Sbjct: 201 P 201


>At3g63070.1 68416.m07084 PWWP domain-containing protein putative
            transcription factor HUA2, Arabidopsis thaliana,
            EMBL:AF116556
          Length = 1347

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 26   KTQPATDRFVKILEGLGLDFQQDSSLIEAPSFLSS--LFKQDENDEGGGGLFEKIAQPLQ 83
            +T+ A D  V+ +EG+ +D    +S ++   F     L  +DE  +  GG FE +    +
Sbjct: 999  RTERALDDPVRDMEGILVDEYGSNSTLQLHGFCIPPILRDEDEGSDSDGGDFESVTPEHE 1058

Query: 84   GGTLNDIIVP 93
              +L + + P
Sbjct: 1059 SRSLEEHVTP 1068


>At1g01810.1 68414.m00100 hypothetical protein
          Length = 160

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)

Query: 198 EQSHKTIHDYERDKLQKIYRQNNNNINLYAHKEPN---RIRNKVVYKYEDEFKLLNQSTK 254
           E+SH+     +RDK +K  + +NNN  L    +P     +R    Y ++  FKL     +
Sbjct: 64  EKSHRRRETRKRDKKKKKKKDSNNNTKLVIGTKPETDAELRRWFSY-FDKSFKL--SLPR 120

Query: 255 PLRINQPNKLS 265
            +++  P KL+
Sbjct: 121 KVKLTSPRKLN 131


>At5g54920.1 68418.m06840 expressed protein
          Length = 517

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 5/64 (7%)

Query: 139 QPTIQYKPI--HHFRPAR--PYHHFAASNIRPSTVYPPSHIS-NIERPYKHRDWNQYNQV 193
           QP I   P   H   P++  PY + A  N    + +P   +   I R   HR   QY+ V
Sbjct: 341 QPEIGISPFLSHASSPSKFVPYTNLATGNAGGGSHFPQHMVGPTINRGQPHRFTTQYHSV 400

Query: 194 PPNP 197
            P P
Sbjct: 401 QPTP 404


>At2g46250.1 68415.m05751 myosin heavy chain-related contains weak
           similarity to Myosin heavy chain, muscle
           (Swiss-Prot:P05661) [Drosophila melanogaster]
          Length = 468

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 196 NPEQSHKTIHDYERDKLQKIYRQNN-NNINLYAHKEPNRIRNKVVYKYEDEFKLLNQSTK 254
           +PE S + + D+E  +  + + +N+  N+N+   ++ +R     + +   E + L  S K
Sbjct: 407 HPESSPRNVDDHESQEKSRTFSKNHPRNVNVMIREDNHRTLKDKLMEARVESRRLRSSLK 466

Query: 255 P 255
           P
Sbjct: 467 P 467


>At1g72890.1 68414.m08431 disease resistance protein (TIR-NBS
           class), putative domain signature TIR-NBS exists,
           suggestive of a disease resistance protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 62  FKQDENDEGGGGLFEKIAQPLQGGTLNDIIVPV-LPFLKHVLTFVVVPMGLEALSLITLV 120
           FK DE  E G  +  ++ Q ++G  +  ++V V  P     L  +   + LE L L+T++
Sbjct: 70  FKDDEELERGRPIPPELRQAIKGSRIAVVVVSVTYPASSWCLEELREILKLEKLGLLTVI 129

Query: 121 PVMTRAIP 128
           P+     P
Sbjct: 130 PIFYEINP 137


>At1g71420.1 68414.m08249 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 745

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 307 WQALTATAKNHSNVKPSKDIKDRLKTIAD----MSYKKVANRFKVQG 349
           W AL  + + H N +  K   D+LK + +    MSY +++N +  +G
Sbjct: 538 WIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEG 584


>At5g03320.1 68418.m00283 protein kinase, putative similar to
           serine/threonine-protein kinase NAK [Arabidopsis
           thaliana] SWISS-PROT:P43293
          Length = 420

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 282 PNSPTKYFNKDSKDGYFHVPVEFDNWQALTATAKNHSNVKPSKDIKDRLKTIADMSYKKV 341
           P SPT  F+  +K G    P +      +++T +N +    +++   R  TI D+  K  
Sbjct: 20  PVSPTSNFSDVNKSGSDFSPRDVSGTSTVSSTGRNSNTSMSARENNLREFTIGDL--KSA 77

Query: 342 ANRFKVQGDDGIGPF 356
              F   G  G G F
Sbjct: 78  TRNFSRSGMIGEGGF 92


>At4g11720.1 68417.m01870 hypothetical protein
          Length = 658

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/58 (24%), Positives = 26/58 (44%)

Query: 172 PSHISNIERPYKHRDWNQYNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINLYAHK 229
           PS    + R + H     ++       Q HK  H  + D LQK+  + +++ + Y H+
Sbjct: 562 PSRADVVNRHHHHHKHRHHHNHHRRTHQRHKHHHGQDDDVLQKMMLERDHSDSHYYHQ 619


>At1g07520.1 68414.m00805 scarecrow transcription factor family
           protein similar to GB:AAD24412 from [Arabidopsis
           thaliana] (Plant J. 18 (1), 111-119 (1999)); contains
           Pfam profile: PF03514 GRAS family transcription factor
          Length = 695

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 272 RNTELKTKIFPNSPTKYFNKDSK-DGYFHVPVEFDNWQALTATAKNHSNVKPSKD 325
           R  E  +K  PN+    FN + + +    V VE + W A++ T KNH   +  +D
Sbjct: 196 RGLEEASKFLPNTDQWIFNLEPEMERVVPVKVE-EGWSAISKTRKNHHEREEEED 249


>At4g39450.1 68417.m05582 expressed protein
          Length = 1553

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 1/114 (0%)

Query: 306 NWQALTATAKNHSNVKPSKDIKDRLKTIADMSYKKV-ANRFKVQGDDGIGPFVLESSSTD 364
           +W  L   A    +V P   +   L+  A      +  N    +  + IG  V+ ++S  
Sbjct: 398 SWSILALIASCFPDVSPLSCLTIWLEITAARETSSIKVNDITTKIAENIGAAVVSTNSLP 457

Query: 365 DNTLPNNGNYKRNNSKRKGVAFEATTDLYSKFYGLDEEAEKKYGSSGISYTEYE 418
            +      +Y R N KR+ +    + DL +    L+  A K + S      E E
Sbjct: 458 TDARGVQFHYNRRNPKRRRLTAHTSVDLLASANSLNISAGKTFCSHRTEAAEDE 511


>At2g47540.1 68415.m05933 pollen Ole e 1 allergen and extensin
           family protein contains Pfam domain, PF01190: Pollen
           proteins Ole e I family
          Length = 173

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 337 SYKKVANRFKVQGDDGIGPFVLESSSTDDNTLPN 370
           +Y+ + N+ K++    +GPFV  S  T D ++PN
Sbjct: 139 NYRLLENKLKMKLFT-VGPFVFSSEETQDKSIPN 171


>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
           contains extensin-like region, Pfam:PF04554
          Length = 256

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 109 MGLEALSLITLVPVMTRAIPGVIDYFFSKPQPTIQ-YKPIHHFR-PARPYHHFAASNIRP 166
           MG    S + L   +        +YF+S P P ++ Y P   ++ P  P  H++   +  
Sbjct: 1   MGAPMASFLVLAFSLAFVSQTTANYFYSSPPPPVKHYSPPPVYKSPPPPVKHYSPPPVYK 60

Query: 167 STVYPPSHIS 176
           S   P  H S
Sbjct: 61  SPPPPVKHYS 70


>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
           contains extensin-like region, Pfam:PF04554
          Length = 293

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 109 MGLEALSLITLVPVMTRAIPGVIDYFFSKPQPTIQ-YKPIHHFR-PARPYHHFAASNIRP 166
           MG    S + L   +        +YF+S P P ++ Y P   ++ P  P  H++   +  
Sbjct: 1   MGAPMASFLVLAFSLAFVSQTTANYFYSSPPPPVKHYSPPPVYKSPPPPVKHYSPPPVYK 60

Query: 167 STVYPPSHIS 176
           S   P  H S
Sbjct: 61  SPPPPVKHYS 70


>At1g14260.2 68414.m01690 zinc finger (C3HC4-type RING finger)
          family protein contains Pfam domain, PF00097: Zinc
          finger, C3HC4 type (RING finger)
          Length = 265

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 1  MANIYAISIFASLLLQVLAEETATLKTQPATDRFVKILEGLGLDFQQDSSLIEA 54
          M+N + +     L+  VLAE   +++T+   D  + I +G   + +++ SLI +
Sbjct: 1  MSNHHTVVYVNGLVRPVLAEAEYSMRTESPADNAIDIYDGDTTENEEEDSLISS 54


>At1g14260.1 68414.m01689 zinc finger (C3HC4-type RING finger)
          family protein contains Pfam domain, PF00097: Zinc
          finger, C3HC4 type (RING finger)
          Length = 265

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 1  MANIYAISIFASLLLQVLAEETATLKTQPATDRFVKILEGLGLDFQQDSSLIEA 54
          M+N + +     L+  VLAE   +++T+   D  + I +G   + +++ SLI +
Sbjct: 1  MSNHHTVVYVNGLVRPVLAEAEYSMRTESPADNAIDIYDGDTTENEEEDSLISS 54


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.315    0.134    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,027,759
Number of Sequences: 28952
Number of extensions: 520156
Number of successful extensions: 1514
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1506
Number of HSP's gapped (non-prelim): 22
length of query: 431
length of database: 12,070,560
effective HSP length: 83
effective length of query: 348
effective length of database: 9,667,544
effective search space: 3364305312
effective search space used: 3364305312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)

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