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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000001-TA|BGIBMGA000001-PA|undefined
         (495 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2...    38   0.020
At3g42580.1 68416.m04420 Ulp1 protease family protein contains P...    37   0.035
At3g09710.1 68416.m01150 calmodulin-binding family protein low s...    36   0.047
At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) severa...    34   0.19 
At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein...    32   0.76 
At5g17160.1 68418.m02010 expressed protein                             32   0.76 
At1g58025.1 68414.m06576 DNA-binding bromodomain-containing prot...    32   0.76 
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro...    32   0.76 
At5g52310.1 68418.m06492 low-temperature-responsive protein 78 (...    32   1.0  
At5g40450.1 68418.m04905 expressed protein                             31   1.3  
At2g18220.1 68415.m02123 expressed protein contains Pfam domain ...    31   1.3  
At5g35794.1 68418.m04297 hypothetical protein contains Pfam prof...    31   1.7  
At3g02810.1 68416.m00273 protein kinase family protein contains ...    31   1.7  
At5g59020.1 68418.m07393 expressed protein                             31   2.3  
At4g39840.1 68417.m05645 expressed protein                             31   2.3  
At4g26630.1 68417.m03837 expressed protein                             31   2.3  
At3g60920.1 68416.m06815 beige/BEACH domain-containing protein c...    31   2.3  
At4g12580.1 68417.m01984 expressed protein predicted protein           30   3.1  
At2g47220.1 68415.m05897 3' exoribonuclease family domain 1 prot...    30   3.1  
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70...    30   3.1  
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom...    30   4.0  
At5g11050.1 68418.m01291 myb family transcription factor contain...    30   4.0  
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso...    30   4.0  
At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly id...    29   5.3  
At2g05642.1 68415.m00603 expressed protein                             29   5.3  
At1g49870.1 68414.m05591 expressed protein ; expression supporte...    29   5.3  
At5g55660.1 68418.m06940 expressed protein similar to unknown pr...    29   7.1  
At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein si...    29   7.1  
At5g04190.1 68418.m00407 phytochrome kinase substrate-related co...    29   7.1  
At3g29710.1 68416.m03745 hypothetical protein contains Pfam prof...    29   7.1  
At2g04330.1 68415.m00429 hypothetical protein contains Pfam prof...    29   7.1  
At4g03830.1 68417.m00534 myosin heavy chain-related                    29   9.3  
At2g45380.1 68415.m05645 expressed protein similar to gi2344899|...    29   9.3  
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ...    29   9.3  
At2g20240.1 68415.m02365 expressed protein                             29   9.3  
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70...    29   9.3  
At1g17040.1 68414.m02071 transcription factor-related contains P...    29   9.3  

>At5g10950.1 68418.m01271 cylicin-related low similarity to
           SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
           taurus}
          Length = 395

 Score = 37.5 bits (83), Expect = 0.020
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 6/90 (6%)

Query: 331 DKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNES 390
           D+V ENS+   +  VLKT N +   + D + N T S +  +   ++  +S   +N  N S
Sbjct: 249 DEVAENSSDEDEPKVLKTNNSKADKDEDEEENET-SDDEAEPKALKLSNS-NSDNGENNS 306

Query: 391 SDDD----FANVKNKQKKIETFQTSSSDGE 416
           SDD+     + + +K+ K  T    + D E
Sbjct: 307 SDDEKEITISKITSKKIKSNTADEENGDNE 336


>At3g42580.1 68416.m04420 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain
          Length = 903

 Score = 36.7 bits (81), Expect = 0.035
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 383 PENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNS 442
           P N +   SDD+  ++   Q        +  DGE SA         HHT+SD+V +    
Sbjct: 380 PSNQKGSFSDDEMKDIAPTQPVPRNVPGNDGDGEVSAK-------KHHTVSDYVMENIYL 432

Query: 443 EESSYCSQSEGGNSDV 458
             +S   Q  GGNS++
Sbjct: 433 GGASPPHQEVGGNSEI 448


>At3g09710.1 68416.m01150 calmodulin-binding family protein low
           similarity to SF16 protein [Helianthus annuus]
           GI:560150; contains Pfam profile PF00612: IQ
           calmodulin-binding motif
          Length = 454

 Score = 36.3 bits (80), Expect = 0.047
 Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 12/124 (9%)

Query: 298 LQARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEP 357
           L+  ++G    S+E+ + T  +D+++  + T  ++  +   T   +N  K  +  K N P
Sbjct: 263 LERWMAGRPWESSEKEQNTTNNDNSSVKNST--NRNSQGGETAKSSNRNKLNSSTKPNTP 320

Query: 358 DSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGEC 417
            +    T +P R KR         IP +++++SSDD+ A    + ++    + S SD E 
Sbjct: 321 SASSTATRNP-RKKRP--------IPSSIKSKSSDDE-AKSSERNRRPSIARPSVSDDET 370

Query: 418 SASA 421
            +S+
Sbjct: 371 LSSS 374


>At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) several
           homeodomain proteins;
          Length = 575

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 389 ESSDDDFANVKNKQKKIETFQTSSSDGECSASA---PSIALPSHHTMSDWVGQTTNSEES 445
           +S     ++ ++++     F  +S++   S+SA   P+ + P     +D V  T N+  +
Sbjct: 421 QSQRSSSSSWRDERTSTTVFPDNSNNNPSSSSAQQRPNNSSPPRRARNDDVHGTNNN--N 478

Query: 446 SYCSQSEGGNSDVGFHYAADSS 467
           SY +   GG S VGF Y   SS
Sbjct: 479 SYVNSGSGGGSAVGFSYGIGSS 500


>At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein
           contains Pfam domain, PF00098: Zinc knuckle
          Length = 275

 Score = 32.3 bits (70), Expect = 0.76
 Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 10/110 (9%)

Query: 321 SANDVDKTPIDKVEEN-STTTAKANVLKTENDEK-------SNEPDSDVNV--TDSPNRG 370
           S +D+D +  D  EE    T  KA V K     K        +E DS+ +V  TDS    
Sbjct: 139 SVDDLDGSDDDDEEERPDATNGKAEVEKRSKKSKRKHRSKSDSESDSEASVFETDSDGSS 198

Query: 371 KRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSAS 420
                 + SS   E+ R        +  K KQ+K    + SSS  E S S
Sbjct: 199 GESSSEYSSSSDSEDERRRRRKAKKSKKKQKQRKERRRRYSSSSSESSES 248


>At5g17160.1 68418.m02010 expressed protein
          Length = 569

 Score = 32.3 bits (70), Expect = 0.76
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 295 VKILQARLSGNKIVSNERNEVTA-KDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEK 353
           + ++ A    NK    E NEVTA K +S N +    +DK EE      +    K +ND++
Sbjct: 240 IVVMDANTEANK---EEMNEVTADKKESENSL--VQVDKEEETLQAICEEGPKKNDNDQE 294

Query: 354 SNEPDSDVNVTDSP 367
             +    V+V+D P
Sbjct: 295 IGDLVIYVDVSDIP 308


>At1g58025.1 68414.m06576 DNA-binding bromodomain-containing protein
           contains bromodomain, INTERPRO:IPR001487; contains
           prenyl group binding site (CAAX box) Prosite:PS00294
          Length = 769

 Score = 32.3 bits (70), Expect = 0.76
 Identities = 22/117 (18%), Positives = 54/117 (46%), Gaps = 1/117 (0%)

Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP-NR 369
           +R +   + DS    + +P      ++++      +  + D+K  +  +++   DSP ++
Sbjct: 361 KRRKRERERDSGAQEESSPAGSPSVDNSSVNMGEDMDIDVDKKPEQEKTEIVELDSPVSK 420

Query: 370 GKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIAL 426
            +R+    +     ENV  ES +   ANV++K + I+     + D   +++A  + +
Sbjct: 421 TQRVIENKQEVEEEENVEVESENKTKANVEDKTQSIDRSMEETGDEPVNSAAEKLVV 477


>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
           protein GI:1279562 from [Medicago sativa]
          Length = 557

 Score = 32.3 bits (70), Expect = 0.76
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 3/111 (2%)

Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRG 370
           +   V AK +S+++ D +  D+  +           K   D  S++ DSD +  D     
Sbjct: 146 KNGSVKAKKESSSEDDSSSEDEPAKKPAAKIAKPAAK---DSSSSDDDSDEDSEDEKPAT 202

Query: 371 KRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
           K+       +    +  +E SD++  + K  QKK +T  +  S  + S+ +
Sbjct: 203 KKAAPAAAKAASSSDSSDEDSDEESEDEKPAQKKADTKASKKSSSDESSES 253



 Score = 28.7 bits (61), Expect = 9.3
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 6/130 (4%)

Query: 334 EENSTTTAKANVLKTENDEKSN-EPDSDVNVTDSPNRGKR-----IGVRFRSSWIPENVR 387
           +  S T   A +  T+  +K   EP+ D++   S  + K+     +        +P+ V 
Sbjct: 3   KSKSATKVVAEIKATKPLKKGKREPEDDIDTKVSLKKQKKDVIAAVQKEKAVKKVPKKVE 62

Query: 388 NESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEESSY 447
           +    D  +  + K KK+   + +SS  E S  + S   P+          T   +    
Sbjct: 63  SSDDSDSESEEEEKAKKVPAKKAASSSDESSDDSSSDDEPAPKKAVAATNGTVAKKSKDD 122

Query: 448 CSQSEGGNSD 457
            S S+  +SD
Sbjct: 123 SSSSDDDSSD 132


>At5g52310.1 68418.m06492 low-temperature-responsive protein 78
           (LTI78) / desiccation-responsive protein 29A (RD29A)
          Length = 710

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 17/75 (22%), Positives = 31/75 (41%)

Query: 177 LSYRKRKKELPKENVSTPLEPTAKNKAIVKLKAKDSDDEDYMAWKKPDINTPIVXXXXXX 236
           LS R+  +E   E+++TP+   +  + +    A   DDE     +K ++ TPI       
Sbjct: 155 LSDREESRETHHESLNTPVSLLSGTEDVTSTFAPSGDDEYLDGQRKVNVETPITLEEESA 214

Query: 237 XXXXXXXXXRYKSNI 251
                     Y+S +
Sbjct: 215 VSDYLSGVSNYQSKV 229


>At5g40450.1 68418.m04905 expressed protein
          Length = 2910

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 4/108 (3%)

Query: 306  KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
            K  S E  E+  ++ S  D+  TP+   EE+S    +    K E  E +NE      V +
Sbjct: 963  KTDSIELGEIAQEERSVTDL--TPLQ--EESSQPNEQEKETKLEKHEPTNEEVKSDEVIE 1018

Query: 366  SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSS 413
              +      +   +    EN+ N   +++    +  QK +ET QT  S
Sbjct: 1019 VLSASPSKELEGETVVEAENIENIKENEEEQAAEKIQKSLETVQTVES 1066


>At2g18220.1 68415.m02123 expressed protein contains Pfam domain
           PF03715: Uncharacterised protein family (UPF0120)
          Length = 779

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 4/87 (4%)

Query: 332 KVEENSTTTAKANVLKTENDEK--SNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNE 389
           + ++ + +  +++V+  EN      N P SD    D  +R ++    F SSW+P +   E
Sbjct: 622 RAQQRNESLVESDVIVGENSAVFGKNAPSSDDE--DDEDRMEKGAAAFNSSWLPGSDSKE 679

Query: 390 SSDDDFANVKNKQKKIETFQTSSSDGE 416
              ++    K K+K+    +T     E
Sbjct: 680 KEPEEEKTKKKKRKRGGKSKTEKKQDE 706


>At5g35794.1 68418.m04297 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 662

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)

Query: 329 PIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRN 388
           P+++VE      A   V++ E +E+S+  D DVNV  S         R +   + + V  
Sbjct: 145 PVEEVERQDDGLA---VIE-EEEERSSASDEDVNVEKSVEEEGNEDERDKDVIVAKPVEE 200

Query: 389 ESSDDDFANV 398
            + D+D ANV
Sbjct: 201 RTIDEDIANV 210


>At3g02810.1 68416.m00273 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 558

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 310 NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
           ++ N V+   + A + DK+     EE+S  + K +V K E  +K  E DS +   D
Sbjct: 372 HDSNLVSPPPELATEDDKSSTSSGEESSLESEKESVSKNEYKKKHEEEDSSMESDD 427


>At5g59020.1 68418.m07393 expressed protein
          Length = 780

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 361 VNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQT--SSSDGECS 418
           VNV DS + GK++G     + +   V+N      FA  K       T +   SS +GEC+
Sbjct: 438 VNVNDSAH-GKKLGSSMVRAVLRVTVKNNQPLFTFAVNKETDIIAATQKKMGSSEEGECT 496

Query: 419 ASAPSIALPSHHTMSDWVGQ 438
           +     ++  H   S W+ Q
Sbjct: 497 SVYTFFSIKDHKRNSGWLNQ 516


>At4g39840.1 68417.m05645 expressed protein
          Length = 451

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPD--SDVNVTDS 366
           S+ +N+ T K  S+  +   P +K  + S+      V K++  EK  +P    D    D 
Sbjct: 167 SSSKNKTTIKPPSSK-LSSPPSEKKSQPSSKP----VTKSKQSEKEIKPFWLDDEEDEDF 221

Query: 367 PNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQ 402
            +  + +  RF+ S IP+  R  ++  ++ N  NKQ
Sbjct: 222 VSEFRDLPTRFQRSLIPDLERISTTSKNYINKANKQ 257


>At4g26630.1 68417.m03837 expressed protein
          Length = 763

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)

Query: 314 EVTAKDDSANDVDK-TPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKR 372
           ++   D+ A   DK + + K E+N+ T      ++   DE   E  +     D       
Sbjct: 57  QIKKDDEKAETEDKESEVKKNEDNAETQKMEEKVEVTKDEGQAEATNMDEDADGKKEQTD 116

Query: 373 IGVRFRSSWIPENVRNESSDDDFANVKNKQKK 404
            GV    + + ENV  ES D+++A    K+ K
Sbjct: 117 DGVSVEDTVMKENV--ESKDNNYAKDDEKETK 146


>At3g60920.1 68416.m06815 beige/BEACH domain-containing protein
            contains Pfam PF02138: Beige/BEACH domain; similar to LBA
            isoform gamma (GI:10257405) [Mus musculus]; similar to
            beige-like protein (CDC4L) - Homo sapiens; similar to
            Neurobeachin: kinase A-anchoring, beige/Chediak-higashi
            protein homolog implicated in neuronal membrane traffic
            (AKAP550) (GI:11863541) [Drosophila melanogaster].
          Length = 1928

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 330  IDKVEENSTTTAKANVLKTENDEKSNE--PDSDVNVTDSPNRGKRIGVRFRSSWIPENVR 387
            ++ V+E +TT    +++ + ++  ++E  PDSD+N+  +P+      +   SS   E   
Sbjct: 1809 MNNVKELNTTDPNTHMVSSFSNPTTSETEPDSDMNIVSTPSNATTNQIDTESS---EAAN 1865

Query: 388  NESSDDDFANVKNKQKKIETFQTS 411
             E+S+      KN  K  +   TS
Sbjct: 1866 YENSNSSIKTSKNTSKITKLTPTS 1889


>At4g12580.1 68417.m01984 expressed protein predicted protein
          Length = 101

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 345 VLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKK 404
           V  TE    +  P   V+  DS      + V  +   +P NV NE+   + A VK ++  
Sbjct: 16  VSNTEEKTTTETPKKTVHADDSATV---VEVEIKGEEVP-NVENETEKTEIAPVKEEKPV 71

Query: 405 IETFQTSSSDGECSASAPS 423
           + T      DG+ +  +P+
Sbjct: 72  VITAVVEEKDGKPAVKSPT 90


>At2g47220.1 68415.m05897 3' exoribonuclease family domain 1
           protein-related similar to  polynucleotide phosphorylase
           [Pisum sativum] GI:2286200, polyribonucleotide
           phophorylase [Spinacia oleracea] GI:1924972; contains
           Pfam profiles PF05266: Protein of unknown function
           (DUF724), weak hit to PF01138: 3' exoribonuclease
           family, domain 1
          Length = 469

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 13/100 (13%)

Query: 302 LSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
           ++ + ++++   E T        V K  +  +E N    ++ N  K +  E   E +SD+
Sbjct: 194 VTSSPVITSTPLEHTEAGTKGKTVPKKTLQPMEMNQLERSEDNSRKRKRGEL--EHNSDL 251

Query: 362 NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNK 401
           N T  P           S W P+ V+N ++DDD    K K
Sbjct: 252 NETVLP-----------SDWTPDPVKNFAADDDDEETKAK 280


>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
           putative contains Pfam profile: PF00012 Heat shock hsp70
           proteins; similar to heat-shock proteins GB:CAA94389,
           GB:AAD55461 [Arabidopsis thaliana]
          Length = 736

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 3/101 (2%)

Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
           K+  N    V+ +  +  + ++  +   ++ S  TAK +  K   +      DSDVN+ D
Sbjct: 483 KVRLNLHGIVSVESATLLEEEEVEVSVTKDQSEETAKMDTDKASAEAAPASGDSDVNMQD 542

Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIE 406
           + +     G     + +PE+       +  +  K  +KK++
Sbjct: 543 AKDTSDATGT---DNGVPESAEKPVQMETDSKAKAPKKKVK 580


>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
           domain-containing protein weak similarity to hepatocyte
           growth factor-regulated tyrosine kinase substrate HRS
           isoform 2 [Homo sapiens] GI:9022389; contains Pfam
           profiles PF00790: VHS domain, PF03127: GAT domain
          Length = 447

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 14/58 (24%), Positives = 29/58 (50%)

Query: 165 NSYYETIIDNELLSYRKRKKELPKENVSTPLEPTAKNKAIVKLKAKDSDDEDYMAWKK 222
           N Y+  +     +S   +K+EL   N +T       N+A +KL+ +D ++E    +++
Sbjct: 279 NGYHSNLEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPEQLFRR 336


>At5g11050.1 68418.m01291 myb family transcription factor contains
           Pfam profile: PF00249 myb-like DNA binding domain;
           identical to cDNA putative transcription factor MYB64
           (MYB64) GI:15375309
          Length = 423

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 335 ENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP 367
           EN  TT+  NVL T N ++ N  DS  ++ D P
Sbjct: 252 ENIMTTSGNNVLSTSNYDQFNSEDSTSSLLDDP 284


>At4g37820.1 68417.m05351 expressed protein Kaposi's
           sarcoma-associated herpes-like virus ORF73gene, Kaposi's
           sarcoma-associated herpesvirus, U52064
          Length = 532

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
           S E NE+  K+    + +++   +  EN  T  K++  + + +  S +    V  TDS N
Sbjct: 382 SQEENEI--KETEIKEKEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSSN 439

Query: 369 --RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIAL 426
             +G              +  N+ ++DD +  ++++K+       + + +        AL
Sbjct: 440 TQKGDEQKTDESKRESGNDTSNKETEDDSSKTESEKKEENNRNGETEETQNEQEQTKSAL 499

Query: 427 PSHHT 431
              HT
Sbjct: 500 EISHT 504


>At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly
           identical to RNA helicase [Arabidopsis thaliana]
           GI:1488521; contains Pfam profiles PF00270: DEAD/DEAH
           box helicase, PF00271: Helicase conserved C-terminal
           domain
          Length = 671

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 176 LLSYRKRKKELPKEN-VSTPLEPTAKNKAIVKLKAKDSDDED 216
           +LS +K +K++ K+  + TP   + K K   KLK  DSD+E+
Sbjct: 5   MLSDKKEEKKMKKKMALDTPELDSKKGKKEQKLKLSDSDEEE 46


>At2g05642.1 68415.m00603 expressed protein
          Length = 394

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 320 DSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSN-EPDSDVNVTDSPNRGKRIGVRFR 378
           D    V K   + ++ N+T      V    N   S  EPDSD+N+  +P+      +   
Sbjct: 273 DKPEIVQKFQENLLQMNTTDPNTHMVSSFSNSTTSETEPDSDMNIVSTPSNATTNQIDTE 332

Query: 379 SSWIPENVRNESSDDDFANVKNKQKKIETFQTS 411
           SS   E    E+S+      KN  K  +   TS
Sbjct: 333 SS---EAANYENSNSSIKTSKNTSKITKLTPTS 362


>At1g49870.1 68414.m05591 expressed protein ; expression supported
           by MPSS
          Length = 828

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 249 SNILTKKHLESFNVRQNQHRALFADGDDGFESLXXXXXXXXXXXXRVKILQARLSGNKIV 308
           S++L  + L   NV  N ++A   +G +  ESL              KI    + GN+ +
Sbjct: 563 SSVLLTEELGKENVDSNNNKA---EGQE--ESLDMILVKPVHRLETEKIASEAVYGNRRI 617

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVE--ENSTTTAKANVLKTENDEKSNE 356
             +R +    + +   +DK  +  V   E      KA V +TEN +++NE
Sbjct: 618 Q-KRKQGAKTESNYESLDKILVKHVPKLEKEKQMFKAGVEETENSKRNNE 666


>At5g55660.1 68418.m06940 expressed protein similar to unknown
           protein (pir||T08929)
          Length = 778

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 6/121 (4%)

Query: 299 QARLSGNKIVSNERNEVTAK---DDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSN 355
           + +L G K   NE  +   K    D  +DVD+   +KV EN     K   LK +N+ +  
Sbjct: 148 EEKLEGGKANGNEEGDTEEKLVGGDKGDDVDEA--EKV-ENVDEDDKEEALKEKNEAELA 204

Query: 356 EPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDG 415
           E +      +     K   V   +      V ++ ++    N   +++K +  + S  D 
Sbjct: 205 EEEETNKGEEVKEANKEDDVEADTKVAEPEVEDKKTESKDENEDKEEEKEDEKEESMDDK 264

Query: 416 E 416
           E
Sbjct: 265 E 265


>At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein
           similar to GTPase activating protein [Yarrowia
           lipolytica] GI:2370595; contains Pfam profile PF00566:
           TBC domain
          Length = 549

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENS-TTTAKANVLKTENDEK-----SNEPDSDVNVT 364
           E+++VT +D + ND D T  ++ E +      +     T N EK     S++P S     
Sbjct: 226 EKSDVTTEDAAGNDSDSTNPEETETSPFLANEEVESHNTVNQEKEISSPSSKPKSQAADE 285

Query: 365 DSPNRGKRI----GVRFRSSWIP 383
           D  +  +RI     VR    W+P
Sbjct: 286 DFMSTWQRIIRLDAVRANDEWVP 308


>At5g04190.1 68418.m00407 phytochrome kinase substrate-related
           contains similarity to Swiss-Prot:Q9SWI1 phytochrome
           kinase substrate 1 [Arabidopsis thaliana]
          Length = 406

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 368 NRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGEC---SASAPSI 424
           NR   I V F S   P+N   +  +++   +   + +    +  S+D  C   + S P  
Sbjct: 25  NRSNDIDVSFSSYLKPDNNEQQQKENEDTELSIFEARSYFSENGSNDSRCQTRNLSGPRF 84

Query: 425 -ALPSHHTMSDWVGQTTNSEES 445
            ++ S    S  VGQT +SE S
Sbjct: 85  SSVASAKVSSFTVGQTASSEAS 106


>At3g29710.1 68416.m03745 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 669

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 349 ENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANV 398
           E +E+S+E D DVNV  S         R     + ++    + D+D ANV
Sbjct: 162 EEEERSSESDEDVNVEKSVEDEGHEDERDEDVIVEKSGEERTIDEDIANV 211


>At2g04330.1 68415.m00429 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 564

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 310 NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNR 369
           NE+ E    + +       P+++ E      A   V++ E +E+S+  D DVNV  S   
Sbjct: 137 NEKEEGKETETNKELACANPVEEAERQDDGLA---VIE-EEEERSSASDEDVNVEKSVED 192

Query: 370 GKRIGVRFRSSWIPENVRNESSDDDFANV 398
                 R     + + V   + D+D ANV
Sbjct: 193 EGDEDERDEDVIVEKPVEERTIDEDIANV 221


>At4g03830.1 68417.m00534 myosin heavy chain-related
          Length = 578

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 294 RVKILQARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEK 353
           R K  + RL  +K+V       T +D      +K    + EE+     K + L ++ND  
Sbjct: 267 RAKQEKDRLKSDKVVMTG----TLEDSKLQAANKAKQPRAEEDGGARQKPSTLASKNDAP 322

Query: 354 SNEPDSDVNVTDSPNRGKRIGVRFR 378
           + +  +    T S +  KR G + R
Sbjct: 323 APDSRTPSKATSSRDPSKRYGDKKR 347


>At2g45380.1 68415.m05645 expressed protein similar to
           gi2344899|AC002388
          Length = 491

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 294 RVKILQARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTT 339
           RV+ ++A LSG  I +N R E T K       +KTP  K   NS++
Sbjct: 60  RVERVRAILSGRSIENNRRTE-TTKPAGELRREKTPAKKGNSNSSS 104


>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
           contains Pfam profile: PF00096 zinc finger, C2H2 type
          Length = 395

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 316 TAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
           T ++D A  + + P  +VE+N+T   K ++ + E++++  E DSD ++    N
Sbjct: 100 TGEEDKAI-IKQLPPRRVEKNNTAQLKGSIEEEESEDEWIEVDSDEDLDAEMN 151


>At2g20240.1 68415.m02365 expressed protein 
          Length = 713

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 440 TNSEESSYCSQSEGGNSDVGFHYAADSSWD 469
           + S+ SS CS +  G+ + G H+  D +WD
Sbjct: 56  SRSKSSSRCSLTCVGSKEAGKHHREDETWD 85


>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
           putative contains Pfam profile: PF00012 Heat shock hsp70
           proteins; similar to heat-shock proteins GB:CAA94389,
           GB:AAD55461 [Arabidopsis thaliana]
          Length = 736

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 19/101 (18%), Positives = 43/101 (42%), Gaps = 3/101 (2%)

Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
           K+  N    V+ +  +  + ++  +   ++ S  TAK +  K   +      DSDVN+ D
Sbjct: 483 KVRLNLHGIVSVESATLLEEEEVEVSVTKDQSEETAKMDTDKASAEAAPASGDSDVNMQD 542

Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIE 406
           + +     G     + +PE+       +  +  +  +KK++
Sbjct: 543 AKDTSDATGT---DNGVPESAEKPVQMETDSKAEAPKKKVK 580


>At1g17040.1 68414.m02071 transcription factor-related contains Pfam
           profile: PF00017 Src homology domain 2; similar to
           transcription factor [Danio rerio] (GI:3687402)
          Length = 641

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 8/126 (6%)

Query: 308 VSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP 367
           V+N+   ++   DS + + +  + + + + +     N    E   +++E D+  + TDS 
Sbjct: 322 VTNQIRCISRNRDSVSSMKRIRLGEEKVSESKIVNGNGTSMEWRPQNHEEDN--SSTDSE 379

Query: 368 NRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIAL- 426
           N   R    FR   IP+ +  +       N+  +   ++    +SSD E S  A  ++L 
Sbjct: 380 NTEMRDSTAFRRYSIPDWIIFKYC---LGNLTERALLLKEITNNSSDEEVSEFADQVSLY 436

Query: 427 --PSHH 430
              SHH
Sbjct: 437 SGCSHH 442


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.313    0.128    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,567,920
Number of Sequences: 28952
Number of extensions: 422255
Number of successful extensions: 1415
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1390
Number of HSP's gapped (non-prelim): 52
length of query: 495
length of database: 12,070,560
effective HSP length: 84
effective length of query: 411
effective length of database: 9,638,592
effective search space: 3961461312
effective search space used: 3961461312
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)

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