Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002167-TA|BGIBMGA002167-PA|IPR006020|Phosphotyrosine
interaction region
(448 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44865| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 2e-06
SB_25258| Best HMM Match : PID (HMM E-Value=1e-06) 38 0.013
SB_25259| Best HMM Match : PhdYeFM (HMM E-Value=6.6) 35 0.12
SB_31695| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.27
SB_55296| Best HMM Match : DUF1154 (HMM E-Value=1.4) 33 0.36
SB_49673| Best HMM Match : PID (HMM E-Value=1.6e-05) 33 0.62
SB_41471| Best HMM Match : Cupin_4 (HMM E-Value=0.31) 33 0.62
SB_25195| Best HMM Match : DnaJ (HMM E-Value=1.9) 33 0.62
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.4
SB_53427| Best HMM Match : RVT_1 (HMM E-Value=0.031) 29 7.7
SB_12717| Best HMM Match : CheR (HMM E-Value=5.6) 29 7.7
>SB_44865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 51.2 bits (117), Expect = 2e-06
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 3/47 (6%)
Query: 67 HRITYCASPPHYPKLFCWVYRHEGKKLKHELRCHAVLCTKESISKKI 113
+R++YC + P++PK+F ++ R + + +L CH VLC+KES++K I
Sbjct: 253 YRVSYCTADPYFPKVFAFIVREQSSR---KLYCHTVLCSKESMAKAI 296
>SB_25258| Best HMM Match : PID (HMM E-Value=1e-06)
Length = 214
Score = 38.3 bits (85), Expect = 0.013
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 22 IEKPLATLWRNYQQSTKPDVVMKLSVTNSGLK-GFTKEHGLTEYWSHR-ITYCASPPHYP 79
IE+ + ++ N + K + L V GLK K H ++ + ++YC +
Sbjct: 35 IEQAVRKIYDNVKLEEKSCPKITLEVCKEGLKITEAKRHQDCRFYPIKDMSYCTLNRYET 94
Query: 80 KLFCWVYRHEGKKLKHELRCHAVLCTKESISKKITEELQVKLKQA-LVEFKKERIS 134
+F + H K ++ CHA++C E +K I L ++ E +KER S
Sbjct: 95 CIFA--FNHHVSKSPRKVECHAIMCNSEEKAKDIALALYSAFREGHFEELRKERKS 148
>SB_25259| Best HMM Match : PhdYeFM (HMM E-Value=6.6)
Length = 393
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 78 YPKLFCWVYRHEGKKLKHELRCHAVLCTKESISKKITEELQVKLKQALVEFKKERISKQN 137
+P+ C V+ K E+ CHAV+C ++ I E L + A +++ +K
Sbjct: 52 FPRNGCNVFVFNNHLSKEEIHCHAVICDSVVRTEAINEALFAAFRSAYFSTLRQKRAKIR 111
Query: 138 ARLSLANSVYDNPSMPRRKILLS 160
LS+ S + R + L S
Sbjct: 112 QDLSMKESQRSRRNSQRTQALSS 134
>SB_31695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 33.9 bits (74), Expect = 0.27
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 56 TKEHGLTEYWSHRITYCASPPHYPKLFCWVYRHEGKKLKHELRCHAVLCTKESISKKITE 115
T++ G T + RI YC +LF + Y+ K + CH +LC+ + +K + +
Sbjct: 89 TEDDGRT-FHLRRILYCGVYSRVQRLFFFNYQSGAKG--DVVNCHIILCSSKEEAKSLAK 145
Query: 116 ELQVKLKQALVE 127
L K A +E
Sbjct: 146 VLSKAFKLAAIE 157
>SB_55296| Best HMM Match : DUF1154 (HMM E-Value=1.4)
Length = 126
Score = 33.5 bits (73), Expect = 0.36
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 107 ESISKKITEELQVKLKQALVEFKK--ERISKQNARLSLANSVYDNPSMPRRKILLSVGSM 164
E + E+++ L+QAL KK R+ KQ+A+ L + Y+ ++P +
Sbjct: 36 EGMDNLTEEQIEELLQQALAVNKKLKRRLRKQSAKQELNAAKYERTAVPNMDAMKMSKYR 95
Query: 165 NYRPPLERSKS 175
PP++ SKS
Sbjct: 96 TILPPIDNSKS 106
>SB_49673| Best HMM Match : PID (HMM E-Value=1.6e-05)
Length = 193
Score = 32.7 bits (71), Expect = 0.62
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 69 ITYCASPPHYPKLFCWVYRHEGKKLKHELRCHAVLCTKESISKKITEELQVKLKQALVEF 128
I +C + KLF ++ EGK L CH C+KE+ +K I L A ++
Sbjct: 102 IAFCTTIKQNKKLFSFIAEVEGK-----LECHVFTCSKEAKAKAICVALSRAFLSAHADW 156
Query: 129 KKER 132
++R
Sbjct: 157 TRKR 160
>SB_41471| Best HMM Match : Cupin_4 (HMM E-Value=0.31)
Length = 406
Score = 32.7 bits (71), Expect = 0.62
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 91 KKLKHELRCHAVLCTKESISKKITEELQVKLKQALVEFKKERISKQNARLSLANSVYD 148
K+ K E + AV E +++ E L+ K ++AL + + ERI K+ + VY+
Sbjct: 304 KREKDEAKARAVKRKNEEVTRLRNERLEEKRQEALRKLELERIQKEQEEKAKREQVYE 361
>SB_25195| Best HMM Match : DnaJ (HMM E-Value=1.9)
Length = 78
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 388 NFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYSE 433
N E ++I +LT+ + ++ EVF +G+S A SD S S+
Sbjct: 31 NKPEKLRAIIKHLTEQRNSEDGSDDEVFNEIGESSDAFSDSSSDSD 76
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 31.5 bits (68), Expect = 1.4
Identities = 37/161 (22%), Positives = 62/161 (38%), Gaps = 13/161 (8%)
Query: 266 SKESNKDVGTSHEDDKLEAIVETNEIIDTAAANVTECKLSS-------NFLVTXXXXXXX 318
+KE+ D T EDD++ ++ D + + T +L+ + L+
Sbjct: 2042 NKEAKVDSNTK-EDDEITGLINAISSGDKTSPSTTRPQLNKRDTDAVLSSLLGSINSSKP 2100
Query: 319 XXXCETASTAASDSEPTSLPSLP-QEDKVAEETGDRIGNYSNEVNHVPIGEKNGFRRRST 377
AS+A SD E ED+ T D I ++S+ + + F R +
Sbjct: 2101 TLDSSWASSAGSDQEGARKGGFGLDEDRPGYSTADSIPHFSSGSSEDKRMSDSSFNRGGS 2160
Query: 378 YPPLS----ASILSNFEENFESLIDNLTDADSLTSSTETEV 414
S A + +N + +ID L DAD L S +V
Sbjct: 2161 DSMDSDYDDADVFDMLRDNSQMVIDMLKDADDLDSGLRGDV 2201
>SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 31.1 bits (67), Expect = 1.9
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 329 ASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHVPIGEKNGFRRRSTYPPLSASILSN 388
+S+SE + P Q ++ +ET I ++++ +N PI N + S +AS +SN
Sbjct: 105 SSESEIETTPQKQQHVRLLDETESSIDSFADCLNP-PILLDNDKKADS-----NASDISN 158
Query: 389 --FEENFESLIDNLTDADSLTSSTETEVFKSVGDS 421
F E SL+D+ DA++ + +E E +S+ S
Sbjct: 159 HEFAEEVYSLLDDSIDANTSNADSEDEKPRSLPQS 193
>SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1662
Score = 29.9 bits (64), Expect = 4.4
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 17/133 (12%)
Query: 271 KDV--GTSHEDDKLEAIVETNEIIDTAAANVTECKLSSNFLVTXXXXXXXXXXCETASTA 328
KDV G+ ED ++ + + I+D + + ++C L+T ++A
Sbjct: 910 KDVLDGSKREDSVVDGSKKKDSIVDGSGVSASDCDTFFQVLLTAARLSWRHIEEKSA--- 966
Query: 329 ASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHVPIGEK--NGFRRRSTYPPLSASIL 386
D SLP++ +++ A ++N V H E+ N ++ PPL A+ L
Sbjct: 967 --DWIRISLPNVVEKELFA-----HFDKFTNAVIHAKSKEELFNEAFKQKKDPPLPAAPL 1019
Query: 387 SNFEENFESLIDN 399
N N ESL DN
Sbjct: 1020 DN---NNESLADN 1029
>SB_53427| Best HMM Match : RVT_1 (HMM E-Value=0.031)
Length = 969
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 323 ETASTAASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHVPIGEKNGFRRRSTYPPL 381
++A+ A S ++ PS P + ++ I S E + PI + F RRS Y P+
Sbjct: 106 QSATVVAVYSPTSTAPSSPNTPRHQTDSRLPIAKTSIEASPQPISYSSPFARRSLYSPI 164
>SB_12717| Best HMM Match : CheR (HMM E-Value=5.6)
Length = 685
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 395 SLIDNLTDADSLTSSTETEVFKSVGDSDS 423
S + +L D+ L +T TEVF SVG DS
Sbjct: 319 SEVKDLLDSGDLVMATATEVFYSVGKKDS 347
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.127 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,773,873
Number of Sequences: 59808
Number of extensions: 506411
Number of successful extensions: 1252
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1243
Number of HSP's gapped (non-prelim): 14
length of query: 448
length of database: 16,821,457
effective HSP length: 84
effective length of query: 364
effective length of database: 11,797,585
effective search space: 4294320940
effective search space used: 4294320940
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)
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