Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002080-TA|BGIBMGA002080-PA|IPR000210|BTB, IPR007087|Zinc
finger, C2H2-type, IPR013069|BTB/POZ
(370 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 50 3e-06
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 47 2e-05
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 46 3e-05
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 45 9e-05
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 41 0.001
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 38 0.014
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 37 0.019
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 36 0.033
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 36 0.033
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 35 0.076
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 35 0.10
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 35 0.10
At1g54740.1 68414.m06242 expressed protein 35 0.10
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 34 0.13
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 34 0.13
At2g40450.1 68415.m04992 speckle-type POZ protein-related contai... 34 0.13
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 33 0.23
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 33 0.31
At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Conta... 33 0.40
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 33 0.40
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 33 0.40
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 32 0.53
At3g56230.1 68416.m06249 speckle-type POZ protein-related contai... 32 0.53
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 32 0.53
At5g11940.1 68418.m01396 subtilase family protein contains simil... 30 2.2
At3g58580.1 68416.m06529 endonuclease/exonuclease/phosphatase fa... 30 2.2
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 30 2.2
At3g05330.1 68416.m00581 cyclin family low similarity to microtu... 30 2.2
At4g10550.1 68417.m01727 subtilase family protein contains simil... 30 2.8
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 30 2.8
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 30 2.8
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 30 2.8
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 29 3.8
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 29 5.0
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 29 5.0
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 29 5.0
At5g11580.1 68418.m01350 UVB-resistance protein-related / regula... 29 6.6
At5g03180.1 68418.m00266 zinc finger (C3HC4-type RING finger) fa... 29 6.6
At3g23740.1 68416.m02985 expressed protein 29 6.6
At3g16250.1 68416.m02050 ferredoxin-related contains Pfam profil... 29 6.6
At5g55780.1 68418.m06952 DC1 domain-containing protein contains ... 28 8.7
At5g17070.1 68418.m02000 expressed protein 28 8.7
At3g29740.1 68416.m03755 hypothetical protein 28 8.7
At2g46260.1 68415.m05752 BTB/POZ domain-containing protein conta... 28 8.7
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 28 8.7
At2g44430.1 68415.m05525 DNA-binding bromodomain-containing prot... 28 8.7
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 16 SNLSQSFHALLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFK-ELFKMNPCEHPIVILK 74
S L F LL+ + D+T G+ AHKL+L+ SP+FK + F + V +
Sbjct: 182 SELGSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTEVTIN 241
Query: 75 DVELQELRQLLQFMYR 90
D+E + + LLQFMY+
Sbjct: 242 DLEPKVFKALLQFMYK 257
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 47.2 bits (107), Expect = 2e-05
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 16 SNLSQSFHALLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFKELFKMNPCE-HPIVILK 74
S L F LL+ DVT G+ AHKL+L+ S +F+ +F E + V++
Sbjct: 189 SELGSHFGKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNSDVVIS 248
Query: 75 DVELQELRQLLQFMYRGEVHVRQQELSGFLHTAELLQ 111
D+E + + LL FMY+ + + L+ H+ +LL+
Sbjct: 249 DLEPKVFKALLHFMYKDSLPGDVEPLTA--HSFDLLR 283
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 46.4 bits (105), Expect = 3e-05
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 16 SNLSQSFHALLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFK-ELFKMNPCEHP-IVIL 73
S L Q F LLE DVT G+ AHKL+L+ S F+ +LF E+ +I+
Sbjct: 186 SGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNCIII 245
Query: 74 KDVELQELRQLLQFMYRGEVHVRQQELSGFLHTAELLQVKGLTGGREK 121
+DV+ + LL F+Y E+ Q + L A L + L ++
Sbjct: 246 EDVQAPIFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHLLAAADR 293
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 44.8 bits (101), Expect = 9e-05
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 16 SNLSQSFHALLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFK-ELFKMNPCEHPIVILK 74
S++ F LLE ED D+T G+ AH+L+L+ SP F+ E + E + +
Sbjct: 200 SDIGSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEFLDVTGEEDRDIEVT 259
Query: 75 DVELQELRQLLQFMYR 90
D+E + + LL ++Y+
Sbjct: 260 DMEPKVFKALLHYIYK 275
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 16 SNLSQSFHALLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFKELF--KMNPCEHPIVIL 73
SN+ Q LL+ E D+ G + AHKLIL+ SP F+ F + +++
Sbjct: 178 SNMGQGLKDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVI 237
Query: 74 KDVELQELRQLLQFMYRGEVHVRQQELSG 102
D+E + +L F+Y +V E++G
Sbjct: 238 DDIEPSIFKAMLSFIYT-DVLPNVHEITG 265
>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain,
PF00023: Ankyrin repeat and Pfam domain, PF00651:
BTB/POZ domain
Length = 491
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 17 NLSQSF-HALLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFKELFKMNPCEHPI 70
+LS F + L+ G+ DVT + G+ VHAH+ IL+ S +F++ F P+
Sbjct: 10 SLSLDFLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGTDSPQPV 64
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 37.1 bits (82), Expect = 0.019
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Query: 16 SNLSQSFHALLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFK-ELFKMNPCEHPIVILK 74
S L Q F LLE DVT G+ AHKL+L+ S F+ +LF P
Sbjct: 186 SGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLF--GPLRSENTNSL 243
Query: 75 DVELQELRQLLQFMYRGEVHVRQQELSGFLHTAEL 109
+VE + LL + + + L+ H EL
Sbjct: 244 EVEAESCPSLLSELLEYVARLSEHSLTSSGHRKEL 278
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 36.3 bits (80), Expect = 0.033
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 38 AGGQYVHAHKLILSVCSPYFKELFKMNPCEHPI---VILKDVELQELRQLLQFMYRGEVH 94
AG + AHK +L SP FK + + N E + + + DV LR + ++Y E
Sbjct: 75 AGSPPIPAHKSVLVSRSPVFKAMLE-NEMEESLSGTIKISDVSYDALRTFVYYLYTAEAC 133
Query: 95 VRQQELSGFLHTAELLQVKGL 115
+ +Q L +E QVK L
Sbjct: 134 LDEQMACDLLVMSEKYQVKHL 154
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain,
PF00023: Ankyrin repeat and Pfam domain, PF00651:
BTB/POZ domain
Length = 467
Score = 36.3 bits (80), Expect = 0.033
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 25 LLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFKELF 61
L+ G+ DVT + G+ VHAH+ IL+ S +F++ F
Sbjct: 20 LINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFF 56
>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 442
Score = 35.1 bits (77), Expect = 0.076
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 16 SNLSQSFHALLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFK-ELF 61
SNL Q LLE DV G+ +AHKL+L+ SP F +LF
Sbjct: 187 SNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVFNAQLF 233
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 34.7 bits (76), Expect = 0.10
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 45 AHKLILSVCSPYFKELFK--MNPCEHPIVILKDVELQELRQLLQFMYRGEVHV 95
+HK+ILS+ S F ++F M+ + L DV + + ++ FMY GE+++
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNM 418
Score = 32.7 bits (71), Expect = 0.40
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 26 LEGEDLVDVTLAAGGQY--VHAHKLILSVCSPYFKELFKMNPCEHPIVILKDVELQELRQ 83
LE L D G + V AHK+IL F + + ++ L+ V L
Sbjct: 205 LESWQLSDTVFLVGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHA 259
Query: 84 LLQFMYRGEVHVRQQELSGFLHTAELLQVKGLTGGREKS 122
LLQ++Y G + + EL+ + +V L E+S
Sbjct: 260 LLQYIYTGRTQILESELAPLRDLSSKFEVMSLVRQCEES 298
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 34.7 bits (76), Expect = 0.10
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 45 AHKLILSVCSPYFKELFK--MNPCEHPIVILKDVELQELRQLLQFMYRGEVHV 95
+HK+ILS+ S F ++F M+ + L DV + + ++ FMY GE+++
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNM 418
Score = 32.7 bits (71), Expect = 0.40
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 26 LEGEDLVDVTLAAGGQY--VHAHKLILSVCSPYFKELFKMNPCEHPIVILKDVELQELRQ 83
LE L D G + V AHK+IL F + + ++ L+ V L
Sbjct: 205 LESWQLSDTVFLVGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHA 259
Query: 84 LLQFMYRGEVHVRQQELSGFLHTAELLQVKGLTGGREKS 122
LLQ++Y G + + EL+ + +V L E+S
Sbjct: 260 LLQYIYTGRTQILESELAPLRDLSSKFEVMSLVRQCEES 298
>At1g54740.1 68414.m06242 expressed protein
Length = 280
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/53 (33%), Positives = 20/53 (37%)
Query: 251 KCPNCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHR 303
+C + H N N H D HDTRE RN H YHHR
Sbjct: 200 RCKSSHDVSVNSNNDVAHFHDDHDTREWMYNSGFKIVASRNHDENNHHHYHHR 252
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 251 KCPNCHRFFANRYNLKVHIR-DKHDTREGTLQCDICQKRMRNPSCLRVH 298
KC C+R F + +L H+R H E T C IC K R+ LR H
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEPT--CGICNKHCRSFDSLREH 53
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 31 LVDVTLAAGGQYVHAHKLILSVCSPYFKELFKMNPCEHPI--VILKDVELQELRQLLQFM 88
L DVT G+ +AH++ L S F+ +F E + + +++ + +++F+
Sbjct: 540 LSDVTFLVEGRTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEVFELMMRFI 599
Query: 89 YRGEVHVRQQELSGFLHTAELLQVKGL 115
Y G V + + L A+ ++GL
Sbjct: 600 YTGSVDITNEISKDLLRAADQYLLEGL 626
>At2g40450.1 68415.m04992 speckle-type POZ protein-related
contains Pfam PF00651 : BTB/POZ domain
Length = 209
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 22 FHALLEGEDLVDVTLAAGGQ----YVHAHKLILSVCSPYFKEL-----FKMNPCEHPIVI 72
F LL + DV L AG + AHKL+L S FK++ FK + + V
Sbjct: 14 FKKLLNEQWQADVRLKAGDSDETTSIFAHKLVLVARSEVFKKILESDEFKASSKQMETVT 73
Query: 73 LKDVELQELRQLLQFMYR 90
L +++ +EL ++F+YR
Sbjct: 74 LSEMKHEELEAFVEFIYR 91
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 33.5 bits (73), Expect = 0.23
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 33 DVTLAAGGQYVHAHKLILSVCSPYFKELFKMNPCEHPIVILKDVELQ--ELRQLLQFMYR 90
DV G+ + AH++ILS SP+FK+ F+ + V +L L L+ F Y
Sbjct: 174 DVMFYVQGRPIEAHRVILSARSPFFKQKFENEWKDRREVRFSKEKLSYPALCSLIHFFYS 233
Query: 91 GEVHVRQQELSGFLHTAELLQVKGL 115
+ + ++ + ++ + + L
Sbjct: 234 DRLEISVDDMEDLVRICKVCKCESL 258
>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein
contains Pfam PF00651: BTB/POZ domain; contains
Interpro IPR000210/ PS50097: BTBB/POZ domain;
Length = 194
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 22 FHALLEGEDLVDVTLAAG-----GQYVHAHKLILSVCSPYFKELFKMN----PCEHPIVI 72
F +L+ + VDV L AG G AHKL+LS S FK++ + + + +
Sbjct: 14 FAKILKEQRQVDVRLKAGDSGDEGASTSAHKLVLSARSEVFKKMLESDEIKASAQLETIT 73
Query: 73 LKDVELQELRQLLQFMY 89
L +++ +EL ++F+Y
Sbjct: 74 LCEMKHEELEAFIEFIY 90
>At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Contains
similarity to gb|AJ000644 SPOP (speckle-type POZ
protein) from Homo sapiens and contains a PF|00651
BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221,
gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come
from this gene;supported by full-length
Length = 326
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 25 LLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFKELF--KMNPCEHPIVILKDVELQELR 82
+LE L DV + + AHK ILS S FK +F + E + + D+ +
Sbjct: 154 MLEESILTDVIIHTADGTLSAHKAILSASSTVFKSMFHHDLMEKESSTIHIDDMSRESCM 213
Query: 83 QLLQFMY 89
LL ++Y
Sbjct: 214 ALLSYLY 220
>At1g01640.2 68414.m00082 speckle-type POZ protein-related
contains Pfam profile:PF00651 BTB/POZ domain; similar
to Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 43 VHAHKLILSVCSPYFKELFKMNPCE---HPIVILKDVELQELRQLLQFMYRGEV 93
+ HK +L+ S F+ + + C+ + L D+ EL+ LL+F+Y G +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNL 90
>At1g01640.1 68414.m00081 speckle-type POZ protein-related
contains Pfam profile:PF00651 BTB/POZ domain; similar
to Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 43 VHAHKLILSVCSPYFKELFKMNPCE---HPIVILKDVELQELRQLLQFMYRGEV 93
+ HK +L+ S F+ + + C+ + L D+ EL+ LL+F+Y G +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNL 90
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 33 DVTLAAGGQYVHAHKLILSVCSPYFKELFKMNPCEHPI--VILKDVELQELRQLLQFMYR 90
DVT G+ +AHK+ L S F+ +F E V + ++ + +++F+Y
Sbjct: 541 DVTFLIDGKQFYAHKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEVFELMMKFIYS 600
Query: 91 GEVHVRQQELSGFLHTAELLQVKGL 115
G +++ + L A+ ++GL
Sbjct: 601 GRINIAKHLAKDLLVAADQYLLEGL 625
>At3g56230.1 68416.m06249 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 282
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 33 DVTLAAG--GQYVHAHKLILSVCSPYFKELFKMNPCEHP---IVILKDVELQELRQLLQF 87
D+ L G G + AH+ +L+ S FK + + C+ + L+++ ++L+ LL+F
Sbjct: 112 DILLKPGDDGPPIPAHRALLASKSEIFKNILDSDGCKTAPEYAITLQELNSEQLQALLEF 171
Query: 88 MYRG 91
+Y G
Sbjct: 172 LYTG 175
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Query: 272 KHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAYLAQLTTQGDQMKQVVQN--MVGA 329
++DT+ C C K + L H+ HR+ AA ++K V + GA
Sbjct: 26 QNDTKSRVFACKTCNKEFPSFQALGGHRASHRRSAALEGHAPPSPKRVKPVKHECPICGA 85
Query: 330 KWRADPGLGVDFREYENSQSSMGNK 354
++ LG R++ G +
Sbjct: 86 EFAVGQALGGHMRKHRGGSGGGGGR 110
>At5g11940.1 68418.m01396 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]
Length = 762
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 155 EDTIATETLAETSDSASVKEETVRSPLKRLLKNTPNK---NASVKKKPRPVNDSPTHPEN 211
ED T T+ SV + V PL + TPN N++VK V S TH N
Sbjct: 670 EDVTLTRTVTNVGPVDSVYKLIVEPPLGVKISVTPNTLLFNSNVKILSYKVTVSTTHKSN 729
Query: 212 TDYAYDS 218
+ Y + S
Sbjct: 730 SIYYFGS 736
>At3g58580.1 68416.m06529 endonuclease/exonuclease/phosphatase
family protein similar to SP|P31384 Glucose-repressible
alcohol dehydrogenase transcriptional effector (Carbon
catabolite repressor protein 4) {Saccharomyces
cerevisiae}; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 605
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Query: 256 HRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMR--------NPSCLRVHKYHHR 303
+R++ + + KV I H T + TLQC C KR +P C HHR
Sbjct: 51 YRWYRVQSDKKVTICSVHPTEQATLQCVFCSKRRSLVPKSYHCSPKCFTDAWQHHR 106
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 251 KCPNCHRFFANRYNLKVHIR-DKHDTREGTLQCDICQKRMRNPSCLRVH 298
KC C+R F +L H++ H E T C +C+K R+ LR H
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEPT--CGVCKKHCRSFESLREH 62
>At3g05330.1 68416.m00581 cyclin family low similarity to
microtubule-binding protein TANGLED1 [Zea mays]
GI:11228986; contains Pfam profile PF00134: Cyclin,
N-terminal domain
Length = 444
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 169 SASVKEETVRSPLKRLLKNTPNKNASVKKKPRPVNDSPTHPEN 211
SAS + +RSP K L+ T N + SV+K PR + SPT N
Sbjct: 289 SASKFQVKIRSPPKVLVSPTRNGSNSVRKSPRG-SRSPTRTVN 330
>At4g10550.1 68417.m01727 subtilase family protein contains
similarity to subtilisin-like protease AIR3 GI:4218991
from [Arabidopsis thaliana]
Length = 778
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 151 VPGGEDTIA-TETLAETSDSASVKEETVRSPLKRLLKNTPNK---NASVKKKPRPVNDSP 206
+P +D + T T+ SV TV PL + TP N++ KK V S
Sbjct: 679 IPNLKDEVTITRTVTNVGPLNSVYRVTVEPPLGFQVTVTPETLVFNSTTKKVYFKVKVST 738
Query: 207 THPENTDYAYDS 218
TH NT Y + S
Sbjct: 739 THKTNTGYYFGS 750
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 173 KEETVRSPLKRLLKNTPNKNASVKKKPRPVNDSPTHPENTDYAYDSEPLIDFDN 226
K+++V LKR+ KN+P K K + ND EN D+ S+ + +N
Sbjct: 325 KKKSVADFLKRIKKNSPQKGKETTSKNQKKNDGNVKKEN-DHQKKSDGNVKKEN 377
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 279 TLQCDICQKRMRNPSCLRVHKYHHRKQ 305
T CDIC++ NP L H HR++
Sbjct: 20 TYDCDICKRGFTNPQALGGHNNIHRRE 46
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 5 EQFSLRWNDFHSNLSQ-----SFHALLEGEDLVDVTLAAGGQYVHAHKLILSVCSPYFKE 59
E +S+ N N SQ S +L D+T+ A + AH+ +L+ SP F+
Sbjct: 132 ELYSIWANGSTENQSQVTAVTSLGRMLTESIYTDITINASDGSIGAHRAVLAARSPVFRS 191
Query: 60 LFKMNPCEHPI--VILKDVELQELRQLLQFMY 89
+F + E + + + D+ L + L ++Y
Sbjct: 192 MFLHDLKEKELSEINVLDMPLDACQAFLSYIY 223
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 164 AETSDSASVKEETVRSPLKRLLKNTPNKNASVKKKPRPVNDSPTHPENTD 213
+E+ + +EET + P + K KN KKK V + T E+ +
Sbjct: 766 SESKKQSDGEEETQKEPSESTKKERKRKNPESKKKAEAVEEEETRKESVE 815
>At5g48510.1 68418.m05998 speckle-type POZ protein-related
contains Pfam PF00651 : BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 224
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 32 VDVTLAAG----GQYVHAHKLILSVCSPYFKELFKMNPCEHPIVILKDVELQELR 82
VDV L A G + AHKLIL+ S FK +F+++ + ++ + L E++
Sbjct: 24 VDVMLKAKNSDEGSAISAHKLILASRSEVFKNMFELDEFKTSTKHVETITLSEMK 78
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 253 PNCHRFFANRYNLKVHIRDKHDTREGTLQCDIC 285
P C ++F N LK HIR H + C+IC
Sbjct: 252 PGCMKYFTNEECLKSHIRSCHQ----HINCEIC 280
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 253 PNCHRFFANRYNLKVHIRDKHDTREGTLQCDIC 285
P C ++F N LK HIR H + C+IC
Sbjct: 164 PGCMKYFTNEECLKSHIRSCHQ----HINCEIC 192
>At5g11580.1 68418.m01350 UVB-resistance protein-related / regulator
of chromosome condensation (RCC1) family protein
contains Pfam PF00415 : Regulator of chromosome
condensation (RCC1); similar to rjs protein (GI:3414809)
[Mus musculus]; similar to HERC2 (GI:4079809) [Homo
sapiens];similar to UVB-resistance protein UVR8
(GI:10177674) {Arabidopsis thaliana}
Length = 553
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 185 LKNTPNKNASVKKKPRPVNDSPTHPENTDYAYDSEPLIDFDNDLFHSVLVLPETKEAGWN 244
L + NK++S+ P PV+D P H AY L+ D LFH+ +V E W
Sbjct: 302 LGHRSNKSSSL---PEPVSDLPEH------AY----LVSVDCGLFHTSVVSSEGYVWSWG 348
Query: 245 CKTGGVKCPN 254
+ G CP+
Sbjct: 349 MERGLGLCPD 358
>At5g03180.1 68418.m00266 zinc finger (C3HC4-type RING finger)
family protein various predicted proteins, Arabidopsis
thaliana ; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 462
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 275 TREGTLQCDICQKRMRN--PSCLRVHKYHHRKQAA 307
T +G + CD+C++ +RN + LRV +R +AA
Sbjct: 284 TIKGNITCDVCKQEVRNLPVTLLRVQDSQNRSRAA 318
>At3g23740.1 68416.m02985 expressed protein
Length = 542
Score = 28.7 bits (61), Expect = 6.6
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 160 TETLAETSDSASVKEETVR-----SPLKRLLKNTPNKNASVK-----KKPRPVN------ 203
T+ ++++ DS K+ T SPLK ++ +TPNKNA+ K P VN
Sbjct: 174 TKPVSQSMDSVYDKDSTGSFCRDTSPLKSVIASTPNKNAAFSRGKLFKTPGSVNYRRMLP 233
Query: 204 -------DSPTHPENTDYAYDSEPL-IDFDNDLFHSVLVLPETKEAGWNCKTGGVKCPNC 255
D+P +NT+ S L + DN+ V+ T+E+G + P C
Sbjct: 234 YLKDIQEDNPYPQKNTEEVISSPMLNSESDNEGTQEVVTSNVTRESGTSSDENEEPLP-C 292
Query: 256 HRFFAN 261
R N
Sbjct: 293 ERVPVN 298
>At3g16250.1 68416.m02050 ferredoxin-related contains Pfam profile:
PF00111 2Fe-2S iron-sulfur cluster binding domains
Length = 204
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 192 NASVKKKPRPVNDSPTHPENTDYAYDSEPLIDFDNDLFHSVLVLPETKEAGWNCKTGGVK 251
NA+ K R ++ +P D P +DF HSVL+ T + W GG K
Sbjct: 40 NAARTKTVRAISTAPASQPPAADEPDEPPAVDFA--FVHSVLLPDGTPDVHWRRANGGQK 97
>At5g55780.1 68418.m06952 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 685
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 199 PRPVNDSPTHPENTDYAYDSEPLIDFDNDLFHSVLVLP 236
P P+N +P P + E L+D D D + V+P
Sbjct: 83 PHPLNSTPHFPCTRSHDQQGESLLDCDKDYICKLPVIP 120
>At5g17070.1 68418.m02000 expressed protein
Length = 277
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 153 GGEDTIATETL-AETSDSASVKEETVRSPLKRLLKNTPNKNASVKKKPRPVNDS 205
G +D I TE A+ D+ +V ET+ P + + + ++ S +P++DS
Sbjct: 209 GDKDEIMTEVEEADVDDAMTVDMETIDEPSETMTTTSESETLSENTAAQPLSDS 262
>At3g29740.1 68416.m03755 hypothetical protein
Length = 87
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 25 LLEGEDLVDVTLAAG-----GQYVHAHKLILSVCSPYFKELFKMNPCEHPIVILKDVELQ 79
+L+ + VDV L AG G + AHKL+LS S FK + + + L + L
Sbjct: 17 ILKEQRQVDVRLKAGDSDQKGVSISAHKLVLSARSEVFKMILETEEIK-ATTTLDTITLS 75
Query: 80 ELR 82
EL+
Sbjct: 76 ELK 78
>At2g46260.1 68415.m05752 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB
containing-protein AtPOB1 (GI:12006855) [Arabidopsis
thaliana]; similar to actinfilin (GI:21667852) [Rattus
norvegicus]
Length = 561
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 32 VDVTLAAGGQYVHAHKLILSVCSPYFKELFK--MNPCEHPIVILKDVELQE---LRQLLQ 86
+D + + +H IL+ SP+F +LF M E V L+ + QE L +LL
Sbjct: 143 IDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTLR-ISAQEEGALMELLN 201
Query: 87 FMYRGEVHV 95
FMY + V
Sbjct: 202 FMYSNSLSV 210
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 272 KHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAYLAQLTTQGDQMKQVVQNMVGAKW 331
K G +C+ C K ++ L H+ H+K A + T+ +Q++ + ++G K
Sbjct: 186 KSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKACM----TKTEQVE--TEYVLGVKE 239
Query: 332 RADPGLGVDFREYENSQSSMGNK 354
+ + FR + + Q+ G+K
Sbjct: 240 KKVHECPICFRVFTSGQALGGHK 262
>At2g44430.1 68415.m05525 DNA-binding bromodomain-containing protein
contains Pfam domains, Pfam PF00439: Bromodomain and
PF00249: Myb-like DNA-binding domain
Length = 646
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 155 EDTIATETLAETSDSASVKEETVRSPLKRLLKNTPNKNASVKKKP--RPVNDSPTHP 209
+DT TE ++D K+++V LKRL KN+P K A + K DS T P
Sbjct: 532 QDTGKTEKKTVSAD----KKKSVADFLKRLKKNSPQKEAKDQNKSGGNVKKDSKTKP 584
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.132 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,946,620
Number of Sequences: 28952
Number of extensions: 378425
Number of successful extensions: 1186
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1151
Number of HSP's gapped (non-prelim): 52
length of query: 370
length of database: 12,070,560
effective HSP length: 82
effective length of query: 288
effective length of database: 9,696,496
effective search space: 2792590848
effective search space used: 2792590848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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