Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002040-TA|BGIBMGA002040-PA|undefined
(382 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 32 0.56
At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recogniti... 32 0.74
At1g60560.2 68414.m06818 SWIM zinc finger family protein contain... 31 1.7
At1g60560.1 68414.m06817 SWIM zinc finger family protein contain... 31 1.7
At2g33720.1 68415.m04133 expressed protein 29 6.9
At3g02210.1 68416.m00202 phytochelatin synthetase family protein... 28 9.1
At1g12740.1 68414.m01479 cytochrome P450 family protein similar ... 28 9.1
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 32.3 bits (70), Expect = 0.56
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 218 DTTVRMCWAHAIKNIKKKVEQTVDKKNRKDIMQDIYALHDASSQEIFNA 266
+T + +AH KNIK K E K + +M+D+Y+ D QE++ A
Sbjct: 376 ETLSTLDYAHRAKNIKNKPEIN-QKMMKSAVMKDLYSEIDRLKQEVYAA 423
>At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recognition
Nexus) repeat-containing protein contains Pfam profile
PF02493: MORN repeat
Length = 871
Score = 31.9 bits (69), Expect = 0.74
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 104 LQKIDGIKLPTKI-QLNNYLSDRRR-IK-FGQPTILLGELEKWIHDHENIPEDEDEPFIM 160
+QK D + L T ++ NY+ D + I+ F QP + GE E E +P DE F
Sbjct: 505 VQKEDPVILHTPTGRIINYVEDEKHGIRLFWQPPLEEGE-EVDPSKVEFLPLGFDE-FYG 562
Query: 161 KYWILESDQPIFKFVLTQKRGLKEKIDSLFDLDFKPKVLVSDAAPAIKNAFLEVFGFDTT 220
K +++ + PI FVL ++ +K +D L + K + I+ LE+
Sbjct: 563 KEVVVKKEHPIKSFVLGIEKSVKPMLDGLEKWTEEKKKAYEERKEMIQQE-LEL----VE 617
Query: 221 VRMCWAHAIKNIK---KKVEQTVDKKNRKDIMQD 251
+C AI+++ KK EQ +KK + ++
Sbjct: 618 AEICLEEAIEDMDEELKKKEQEEEKKTEMGLTEE 651
>At1g60560.2 68414.m06818 SWIM zinc finger family protein contains
Pfam domain PF04434: SWIM zinc finger
Length = 500
Score = 30.7 bits (66), Expect = 1.7
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 221 VRMCWAHAIKNIKKKVEQT-VDKKNRKDIMQDIYALHDA-SSQEIFNAASQAFIVKHASK 278
VR W ++N+ KK + V + K + + +Y++ D + + +Q F+ +
Sbjct: 388 VRRSW---LRNVVKKCDSIEVQRDLFKCLGELVYSIWDGVDTTKALEKLTQDFV----DQ 440
Query: 279 TSFIKYFEQEWLIKNPNWFLGGAATP--SPTTNNALEAFNKSIK 320
T+F++YF WL K W + P S A+EA++ +K
Sbjct: 441 TAFMQYFTSTWLPKIGMWLSTMKSLPLASQEACGAIEAYHIKLK 484
>At1g60560.1 68414.m06817 SWIM zinc finger family protein contains
Pfam domain PF04434: SWIM zinc finger
Length = 703
Score = 30.7 bits (66), Expect = 1.7
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 221 VRMCWAHAIKNIKKKVEQT-VDKKNRKDIMQDIYALHDA-SSQEIFNAASQAFIVKHASK 278
VR W ++N+ KK + V + K + + +Y++ D + + +Q F+ +
Sbjct: 388 VRRSW---LRNVVKKCDSIEVQRDLFKCLGELVYSIWDGVDTTKALEKLTQDFV----DQ 440
Query: 279 TSFIKYFEQEWLIKNPNWFLGGAATP--SPTTNNALEAFNKSIK 320
T+F++YF WL K W + P S A+EA++ +K
Sbjct: 441 TAFMQYFTSTWLPKIGMWLSTMKSLPLASQEACGAIEAYHIKLK 484
>At2g33720.1 68415.m04133 expressed protein
Length = 326
Score = 28.7 bits (61), Expect = 6.9
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 254 ALHDASSQEIFNAASQAFIVKHASKTSFIKYFEQEWLIKN--PNWFLGGAATPSPTTNNA 311
A + +S+E N A + K A K Y E + W L A T S N
Sbjct: 157 AYNKPTSEEAINLAWMRTMSKRARKEEEKYYVSTELTLLTVADPWTLKMAMTKSSIGNLY 216
Query: 312 LEAFNKSIKDHNTMREHFPLSRFLTVASEMVTHWSNDINENSFPETHNIELKEWTK 367
S D + +R + PL + V + + + ++ ++ HN+ LK+W K
Sbjct: 217 RLVLKASFVDIHILR-YLPLDDQMMVKED--SGLAVEVYDHDTDSVHNLALKKWAK 269
>At3g02210.1 68416.m00202 phytochelatin synthetase family protein /
COBRA cell expansion protein COBL3 similar to
phytochelatin synthetase [Hordeum vulgare subsp.
vulgare] GI:29570314; identified in Roudier, et al,
Plant Phys. (2002) 130:538-548 (PMID:12376623);
supported by cDNA: gi|26452134|dbj|AK118555.1; contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 452
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 335 LTVASEMVTHWSND-----INENSFPETHNIELKEWTKGYCWAKQNV 376
+TV +++T W+ D + +F + +I+ WT G+ WAK+ V
Sbjct: 43 ITVKWDIIT-WTGDGYVATVTVYNFQQYRHIQAPGWTLGWSWAKREV 88
>At1g12740.1 68414.m01479 cytochrome P450 family protein similar to
Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana]
Length = 472
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 207 IKNAFLEVFGFDTTVRMCWAHAIKNIKKKVEQTVDKKNRKDIMQDIYALHDASSQEIFNA 266
+KN L +FG D +K + +VE T +K+ QD L DA++ IF+
Sbjct: 128 LKNMVLTLFGHD---------GLKKMLPQVEMTANKRLELWSNQDSVELKDATASMIFDL 178
Query: 267 ASQAFIVKHASKTS 280
++ I K+S
Sbjct: 179 TAKKLISHDPDKSS 192
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.136 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,955,144
Number of Sequences: 28952
Number of extensions: 380303
Number of successful extensions: 909
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 908
Number of HSP's gapped (non-prelim): 7
length of query: 382
length of database: 12,070,560
effective HSP length: 82
effective length of query: 300
effective length of database: 9,696,496
effective search space: 2908948800
effective search space used: 2908948800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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