Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001953-TA|BGIBMGA001953-PA|IPR004088|KH, type 1,
IPR009019|KH, prokaryotic type
(72 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g14170.1 68414.m01675 KH domain-containing protein location o... 36 0.002
At5g53060.1 68418.m06592 KH domain-containing protein 34 0.010
At5g15270.2 68418.m01789 KH domain-containing protein various pr... 33 0.031
At5g15270.1 68418.m01788 KH domain-containing protein various pr... 33 0.031
At4g18375.2 68417.m02727 KH domain-containing protein contains s... 31 0.071
At4g18375.1 68417.m02726 KH domain-containing protein contains s... 31 0.071
At5g46190.1 68418.m05681 KH domain-containing protein strong sim... 31 0.093
At5g04430.2 68418.m00438 KH domain-containing protein NOVA, puta... 30 0.16
At5g04430.1 68418.m00437 KH domain-containing protein NOVA, puta... 30 0.16
At5g64390.2 68418.m08088 KH domain-containing RNA-binding protei... 29 0.38
At5g64390.1 68418.m08089 KH domain-containing RNA-binding protei... 29 0.38
At3g04610.1 68416.m00493 KH domain-containing protein similar pu... 29 0.38
At1g51580.1 68414.m05806 KH domain-containing protein 28 0.66
At2g25970.1 68415.m03117 KH domain-containing protein 27 1.5
At2g03110.1 68415.m00264 KH domain-containing protein 27 1.5
At5g09560.1 68418.m01107 KH domain-containing protein various pr... 27 2.0
At5g25550.1 68418.m03040 leucine-rich repeat family protein / ex... 25 4.6
At1g70810.1 68414.m08168 C2 domain-containing protein similar to... 25 6.1
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 25 6.1
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 25 8.1
At4g26000.1 68417.m03745 KH domain-containing protein single-str... 25 8.1
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 25 8.1
At1g44160.1 68414.m05100 DNAJ chaperone C-terminal domain-contai... 25 8.1
>At1g14170.1 68414.m01675 KH domain-containing protein location of
EST 219C14T7 , gb|N38506
Length = 454
Score = 36.3 bits (80), Expect = 0.002
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 36 GSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREI 72
G D + R+L+ S+ GC+IGK G+ I E+R +
Sbjct: 321 GKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSV 357
Score = 34.7 bits (76), Expect = 0.008
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 6 YGDDG----PAQKRHRQTDDEVTFLIPSKFHNQGGSRMGD-QELDVRMLIHQSRAGCVIG 60
+GDDG PA + D V + +G+ Q + VRML+ + GCVIG
Sbjct: 78 FGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIG 137
Query: 61 KAGSKIKELR 70
K G I+ LR
Sbjct: 138 KGGQVIQNLR 147
>At5g53060.1 68418.m06592 KH domain-containing protein
Length = 652
Score = 34.3 bits (75), Expect = 0.010
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 28 PSKFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 70
P + + GG R G + R+++ + GC++GK G I+++R
Sbjct: 160 PEEEEDYGGVRPGGGRVVTRLVVSRMHVGCLLGKGGKIIEQMR 202
Score = 31.9 bits (69), Expect = 0.053
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELRE 71
R+L H ++AG VIGK+G+ IK +R+
Sbjct: 71 RILCHDAKAGGVIGKSGTIIKSIRQ 95
>At5g15270.2 68418.m01789 KH domain-containing protein various
predicted proteins, Arabidopsis thaliana and Oryza
sativa
Length = 548
Score = 32.7 bits (71), Expect = 0.031
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELREI 72
R+L+ SR GC++GK G+ I E+R +
Sbjct: 373 RLLVPSSRIGCILGKGGAIITEMRRM 398
Score = 29.1 bits (62), Expect = 0.38
Identities = 7/31 (22%), Positives = 21/31 (67%)
Query: 40 GDQELDVRMLIHQSRAGCVIGKAGSKIKELR 70
G++++ ++L+ + GC++G+ G ++ +R
Sbjct: 143 GEKQVTAKLLVPSDQIGCILGRGGQIVQNIR 173
>At5g15270.1 68418.m01788 KH domain-containing protein various
predicted proteins, Arabidopsis thaliana and Oryza
sativa
Length = 548
Score = 32.7 bits (71), Expect = 0.031
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELREI 72
R+L+ SR GC++GK G+ I E+R +
Sbjct: 373 RLLVPSSRIGCILGKGGAIITEMRRM 398
Score = 29.1 bits (62), Expect = 0.38
Identities = 7/31 (22%), Positives = 21/31 (67%)
Query: 40 GDQELDVRMLIHQSRAGCVIGKAGSKIKELR 70
G++++ ++L+ + GC++G+ G ++ +R
Sbjct: 143 GEKQVTAKLLVPSDQIGCILGRGGQIVQNIR 173
>At4g18375.2 68417.m02727 KH domain-containing protein contains
similarity to RNA-binding KH-domains PF:00013
Length = 606
Score = 31.5 bits (68), Expect = 0.071
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 42 QELDVRMLIHQSRAGCVIGKAGSKIKELRE 71
+ + +++L+ GCVIGK+GS I E+R+
Sbjct: 393 ENVKMQLLVSSKVIGCVIGKSGSVINEIRK 422
Score = 28.7 bits (61), Expect = 0.50
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 41 DQELDVRMLIHQSRAGCVIGKAGSKIKELR 70
D + R+L+ S++ +IGKAG IK +R
Sbjct: 136 DDNKECRLLVPFSQSSSLIGKAGENIKRIR 165
Score = 27.5 bits (58), Expect = 1.1
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 32 HNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELRE 71
H GGS + EL ++L VIGK GS IK +RE
Sbjct: 301 HGFGGSSRSE-ELVFKVLCPLCNIMRVIGKGGSTIKRIRE 339
>At4g18375.1 68417.m02726 KH domain-containing protein contains
similarity to RNA-binding KH-domains PF:00013
Length = 532
Score = 31.5 bits (68), Expect = 0.071
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 42 QELDVRMLIHQSRAGCVIGKAGSKIKELRE 71
+ + +++L+ GCVIGK+GS I E+R+
Sbjct: 393 ENVKMQLLVSSKVIGCVIGKSGSVINEIRK 422
Score = 28.7 bits (61), Expect = 0.50
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 41 DQELDVRMLIHQSRAGCVIGKAGSKIKELR 70
D + R+L+ S++ +IGKAG IK +R
Sbjct: 136 DDNKECRLLVPFSQSSSLIGKAGENIKRIR 165
Score = 27.5 bits (58), Expect = 1.1
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 32 HNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELRE 71
H GGS + EL ++L VIGK GS IK +RE
Sbjct: 301 HGFGGSSRSE-ELVFKVLCPLCNIMRVIGKGGSTIKRIRE 339
>At5g46190.1 68418.m05681 KH domain-containing protein strong
similarity to unknown protein (pir||T04533)
Length = 644
Score = 31.1 bits (67), Expect = 0.093
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 41 DQELDVRMLIHQSRAGCVIGKAGSKIKELRE 71
+ ++ +++L+ GC+IGK+GS I E+R+
Sbjct: 396 EDKVKMQLLVSSKVIGCIIGKSGSIISEIRK 426
Score = 30.3 bits (65), Expect = 0.16
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 32 HNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELRE 71
H GGS ++ L ++++ S+ G VIGK G IK +R+
Sbjct: 306 HGFGGSSRSEK-LAIKVICSSSKIGRVIGKGGLTIKGIRQ 344
Score = 28.7 bits (61), Expect = 0.50
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 41 DQELDVRMLIHQSRAGCVIGKAGSKIKELR 70
D + R+L+ S+ VIGK+GS IK +R
Sbjct: 147 DDFRECRLLVPSSQCSIVIGKSGSIIKNIR 176
>At5g04430.2 68418.m00438 KH domain-containing protein NOVA,
putative astrocytic NOVA-like RNA-binding protein, Homo
sapiens, U70477
Length = 334
Score = 30.3 bits (65), Expect = 0.16
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 32 HNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 70
H+ + ++ +R L+ + AG VIGK GS I E +
Sbjct: 23 HDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQ 61
Score = 27.9 bits (59), Expect = 0.87
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 29 SKFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELRE 71
S+ H + G+ + + +R+++ S G +IGK G+ IK E
Sbjct: 107 SELHAEDGNEV-EPRRRIRLVVPNSSCGGIIGKGGATIKSFIE 148
>At5g04430.1 68418.m00437 KH domain-containing protein NOVA,
putative astrocytic NOVA-like RNA-binding protein, Homo
sapiens, U70477
Length = 313
Score = 30.3 bits (65), Expect = 0.16
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 32 HNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 70
H+ + ++ +R L+ + AG VIGK GS I E +
Sbjct: 23 HDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQ 61
Score = 27.9 bits (59), Expect = 0.87
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 29 SKFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELRE 71
S+ H + G+ + + +R+++ S G +IGK G+ IK E
Sbjct: 107 SELHAEDGNEV-EPRRRIRLVVPNSSCGGIIGKGGATIKSFIE 148
>At5g64390.2 68418.m08088 KH domain-containing RNA-binding protein
(HEN4) contains similarity to RNA-binding protein;
identical to cDNA HEN4 isoform 2 (HEN4) GI:28261404;
contains Pfam domain PF00013: KH domain; identical to
cDNA HEN4 (HEN4) GI:28261402
Length = 824
Score = 29.1 bits (62), Expect = 0.38
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 44 LDVRMLIHQSRAGCVIGKAGSKIKELRE 71
+ R+++ S+ GCV+GK G + E+R+
Sbjct: 542 ITARLVVPTSQIGCVLGKGGVIVSEMRK 569
Score = 27.9 bits (59), Expect = 0.87
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELRE 71
R+L S G VIGK+G+ IK+L++
Sbjct: 50 RLLCPLSHVGAVIGKSGNVIKQLQQ 74
Score = 27.1 bits (57), Expect = 1.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELRE 71
R+L S AG VIGK G + +R+
Sbjct: 153 RLLTESSHAGAVIGKGGQMVGSIRK 177
>At5g64390.1 68418.m08089 KH domain-containing RNA-binding protein
(HEN4) contains similarity to RNA-binding protein;
identical to cDNA HEN4 isoform 2 (HEN4) GI:28261404;
contains Pfam domain PF00013: KH domain; identical to
cDNA HEN4 (HEN4) GI:28261402
Length = 857
Score = 29.1 bits (62), Expect = 0.38
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 44 LDVRMLIHQSRAGCVIGKAGSKIKELRE 71
+ R+++ S+ GCV+GK G + E+R+
Sbjct: 542 ITARLVVPTSQIGCVLGKGGVIVSEMRK 569
Score = 27.9 bits (59), Expect = 0.87
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELRE 71
R+L S G VIGK+G+ IK+L++
Sbjct: 50 RLLCPLSHVGAVIGKSGNVIKQLQQ 74
Score = 27.1 bits (57), Expect = 1.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELRE 71
R+L S AG VIGK G + +R+
Sbjct: 153 RLLTESSHAGAVIGKGGQMVGSIRK 177
>At3g04610.1 68416.m00493 KH domain-containing protein similar
putative nucleic acid binding protein GB:CAB39665
[Arabidopsis thaliana]; Pfam HMM hit: KH domain family
of RNA binding proteins
Length = 577
Score = 29.1 bits (62), Expect = 0.38
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 43 ELDVRMLIHQSRAGCVIGKAGSKIKELRE 71
++ R+L+ S+AG +IGK G +K ++E
Sbjct: 276 KVSTRLLVPASQAGSLIGKQGGTVKAIQE 304
Score = 25.4 bits (53), Expect = 4.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELRE 71
RML+ + G +IG+ G IK++ E
Sbjct: 190 RMLVPAQKVGSIIGRKGDVIKKIVE 214
Score = 25.4 bits (53), Expect = 4.6
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 28 PSKFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREI 72
P H M Q++ +M I S A VIG +GS I R +
Sbjct: 442 PMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRL 486
>At1g51580.1 68414.m05806 KH domain-containing protein
Length = 621
Score = 28.3 bits (60), Expect = 0.66
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 42 QELDVRMLIHQSRAGCVIGKAGSKIKELREI 72
+ + R+L +R G +IGK GS I+ L+ +
Sbjct: 17 ESVHFRLLCPATRTGAIIGKGGSVIRHLQSV 47
Score = 25.8 bits (54), Expect = 3.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELR 70
R+L+H G ++GK G I E+R
Sbjct: 363 RLLVHSPYIGRLLGKGGHLISEMR 386
Score = 24.6 bits (51), Expect = 8.1
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 41 DQELDVRMLIHQSRAGCVIGKAGSKIKELR 70
++E+ R+L + G +IGK G+ ++ L+
Sbjct: 273 EEEVAFRLLCPADKVGSLIGKGGAVVRALQ 302
>At2g25970.1 68415.m03117 KH domain-containing protein
Length = 632
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 35 GGSRMGDQELDVR--MLIHQSRAGCVIGKAGSKIKELR 70
GG RMG Q + M I ++ G +IGK G IK ++
Sbjct: 219 GGRRMGGQAGADQFVMKIPNNKVGLIIGKGGETIKSMQ 256
>At2g03110.1 68415.m00264 KH domain-containing protein
Length = 155
Score = 27.1 bits (57), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 40 GDQELDVRMLIHQSRAGCVIGKAGSKIKELR 70
G + VRML+ + G +IGK G I+ LR
Sbjct: 69 GQTVVTVRMLVPSDQIGYLIGKGGPIIQTLR 99
>At5g09560.1 68418.m01107 KH domain-containing protein various
predicted RNA binding proteins, Arabidopsis thaliana
Length = 563
Score = 26.6 bits (56), Expect = 2.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELRE 71
R+L + S+AG VIGK G +K+L +
Sbjct: 33 RILCNVSQAGHVIGKHGGMVKKLHK 57
>At5g25550.1 68418.m03040 leucine-rich repeat family protein /
extensin family protein similar to leucine-rich
repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana];
contains Pfam PF00560: Leucine Rich Repeat domains
Length = 433
Score = 25.4 bits (53), Expect = 4.6
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 20 DDEVTFLIPSKFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREI 72
D + FL ++F ++ MG+ + V +L GC+ G K L EI
Sbjct: 195 DLDALFLNSNRFRSKIPVNMGNSPVSVLVLASNRFEGCIPPSFGKMGKTLNEI 247
>At1g70810.1 68414.m08168 C2 domain-containing protein similar to
zinc finger and C2 domain protein GI:9957238 from
[Arabidopsis thaliana]
Length = 165
Score = 25.0 bits (52), Expect = 6.1
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 17 RQTDDEVTFLIPSKFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 69
R D+ V ++ K +MGD ++D++ + + G G++IK +
Sbjct: 61 RHPDEPVNLIVYDKDTFTSHDKMGDAKIDIKPFLEVHKMGLQELPDGTEIKRV 113
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 25.0 bits (52), Expect = 6.1
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 22 EVTFLIPSKFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREI 72
+ FL ++F MG+ + +L + GC+ G G K L E+
Sbjct: 197 DAIFLNHNRFRFGIPKNMGNSPVSALVLADNNLGGCIPGSIGQMGKTLNEL 247
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40
repeat family protein contains Pfam PF00400: WD domain,
G-beta repeat; contains Pfam PF00069: Protein kinase
domain; contains PF02985: HEAT repeat; similar to
adaptor protein (GI:1817584) [Homo sapiens]; similar to
VPS15 protein (GI:6103009) [Pichia pastoris]
Length = 1494
Score = 24.6 bits (51), Expect = 8.1
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 25 FLIPSKFHNQGGSRMGDQELDVRMLIHQSRAGCVIGK 61
+L P +F+ GG Q+ ++ + GCVI +
Sbjct: 197 YLAPERFYEHGGETQVAQDAPLKPSMDIFAVGCVIAE 233
>At4g26000.1 68417.m03745 KH domain-containing protein
single-stranded nucleic acid-binding protein CBP -
mouse, PIR2:S78515
Length = 495
Score = 24.6 bits (51), Expect = 8.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 47 RMLIHQSRAGCVIGKAGSKIKELRE 71
RM++ ++ G +IG+ G IK++ E
Sbjct: 77 RMIVPVTKVGAIIGRKGDFIKKMCE 101
Score = 24.6 bits (51), Expect = 8.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 46 VRMLIHQSRAGCVIGKAGSKIKELRE 71
VR+L+ ++A +IGK GS IK + E
Sbjct: 168 VRLLVASTQAINLIGKQGSLIKSIVE 193
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 24.6 bits (51), Expect = 8.1
Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 9 DGPAQKRHRQTDDEVTFLIPSKFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKE 68
+GP + D + F+ ++F + +GD + V ++ + GC+ G ++
Sbjct: 211 EGPVPRELFSKDLDAIFINHNRFRFELPDNLGDSPVSVIVVANNHFHGCIPTSLGD-MRN 269
Query: 69 LREI 72
L EI
Sbjct: 270 LEEI 273
>At1g44160.1 68414.m05100 DNAJ chaperone C-terminal
domain-containing protein contains Pfam profile PF01556:
DnaJ C terminal region
Length = 357
Score = 24.6 bits (51), Expect = 8.1
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 9 DGPAQKRHRQTDDEVTFLIPSKFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKA 62
+G + R ++TF+I K H D E+ V + + ++ GC + A
Sbjct: 236 EGKGNEAMRSVPADLTFVIVEKEHEVFKREGDDLEMAVEVSLLEALTGCELSVA 289
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.137 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,872,854
Number of Sequences: 28952
Number of extensions: 65516
Number of successful extensions: 154
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 100
Number of HSP's gapped (non-prelim): 56
length of query: 72
length of database: 12,070,560
effective HSP length: 52
effective length of query: 20
effective length of database: 10,565,056
effective search space: 211301120
effective search space used: 211301120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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