Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001921-TA|BGIBMGA001921-PA|IPR004000|Actin/actin-like
         (418 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   2.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   2.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   5.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   5.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   5.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   5.4  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   9.4  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 87  DLME-RYIEQCVFKYLRAEPEDH 108
           DL E +Y+E+CV + LR  P  H
Sbjct: 357 DLQEMKYLERCVKEVLRLYPSVH 379


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 87  DLME-RYIEQCVFKYLRAEPEDH 108
           DL E +Y+E+CV + LR  P  H
Sbjct: 357 DLQEMKYLERCVKEVLRLYPSVH 379


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 346 RLKLSTMLSEGRITPKPIDVQVVSHN 371
           R+K    + EG I P+PI   + + N
Sbjct: 305 RMKQKKRMKEGLIPPEPISASLSTSN 330


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 88  LMERYIEQCVFKYLRAE 104
           ++ RYIE+ + KY  AE
Sbjct: 191 ILNRYIEESISKYKHAE 207


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 346 RLKLSTMLSEGRITPKPIDVQVVSHN 371
           R+K    + EG I P+PI   + + N
Sbjct: 94  RMKQKKRMKEGLIPPEPISASLSTSN 119


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 346 RLKLSTMLSEGRITPKPIDVQVVSHN 371
           R+K    + EG I P+PI   + + N
Sbjct: 94  RMKQKKRMKEGLIPPEPISASLSTSN 119


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  RYIEQCVFKYLRAEPEDHHFLMT 113
           +Y+E+C+ + LR  P  H    T
Sbjct: 46  KYLERCIKETLRLYPSVHFISRT 68


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.138    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,574
Number of Sequences: 317
Number of extensions: 4278
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 7
length of query: 418
length of database: 114,650
effective HSP length: 58
effective length of query: 360
effective length of database: 96,264
effective search space: 34655040
effective search space used: 34655040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)