Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001855-TA|BGIBMGA001855-PA|IPR012581|NUC156
         (158 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   2.8  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   6.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   8.6  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    20   8.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   8.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 91  PLPVGILSQVNTLVYS 106
           P+ +G L Q NT+V+S
Sbjct: 256 PIIIGCLIQFNTIVFS 271


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 82  EKQVLYIITPLPVGILSQVNTLVYSDW 108
           EK++   ++ LPV  L Q++  V + W
Sbjct: 242 EKEIFERLSALPVDKLLQISEKVANIW 268


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 105  YSDWAPEIVGQEKYLPDNI 123
            +++WA    G  KYLP++I
Sbjct: 1404 FTNWAWYRKGLGKYLPEDI 1422



 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 105  YSDWAPEIVGQEKYLPDNI 123
            +++WA    G  KYLP +I
Sbjct: 2327 FTNWAWYRQGDGKYLPSDI 2345


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 82  EKQVLYIITPLPVGILSQVNTLVYSDW 108
           EK++   ++ LPV  L Q++  V + W
Sbjct: 244 EKEIFERLSALPVDKLLQISEEVANIW 270


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 38  VTKVINGKIVALCKLTTV 55
           +T+VI+ K+V   K TTV
Sbjct: 159 ITRVIDSKVVDSRKNTTV 176


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/38 (18%), Positives = 18/38 (47%)

Query: 86  LYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNI 123
           L+ +T   +   +      Y+ W  +  G  +++P++I
Sbjct: 10  LFALTTTQIHAATDKVICYYASWGAQRPGNGQFVPEDI 47


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 82  EKQVLYIITPLPVGILSQVNTLVYSDW 108
           EK++   ++ LPV  L Q++  V + W
Sbjct: 242 EKEIFERLSVLPVDKLLQISEEVANIW 268


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.141    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,731
Number of Sequences: 317
Number of extensions: 1399
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 158
length of database: 114,650
effective HSP length: 52
effective length of query: 106
effective length of database: 98,166
effective search space: 10405596
effective search space used: 10405596
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)