BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001854-TA|BGIBMGA001854-PA|undefined (350 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2 SB_11520| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3 SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3 SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6 SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 29 7.5 SB_11721| Best HMM Match : Peptidase_C12 (HMM E-Value=0) 28 9.9 SB_9909| Best HMM Match : AAA (HMM E-Value=0) 28 9.9 SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 28 9.9 SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 28 9.9 >SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1075 Score = 29.9 bits (64), Expect = 3.2 Identities = 17/54 (31%), Positives = 24/54 (44%) Query: 285 ICGGKGTGKSTMLRYLCNRLLDHGPVLVIDLDPGQAEFTVAGNLSVTIVNEPLL 338 I G G GKS++L L G VL+ +D G + A I +P+L Sbjct: 865 IAGRTGAGKSSLLAALFRMPEPGGEVLIDGIDLGTIDIQAARRAMAVITQDPVL 918 >SB_11520| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 215 Score = 29.5 bits (63), Expect = 4.3 Identities = 12/48 (25%), Positives = 24/48 (50%) Query: 70 ETNPETLTEIASIAVDETMPSENISNEEDSVDFTNKPNLDSVQIYYGT 117 ETN + I++ A++ S+ + D FT+K + + + +Y T Sbjct: 61 ETNYSRFSRISNRALNRMYSSDTLGTARDMASFTSKSRIKAYKTFYST 108 >SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1396 Score = 29.5 bits (63), Expect = 4.3 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 129 ILYFHGKVTMRALGGQMEVFGYNLKDQYQEVYAPRLNYALSVKTVESENNYQGLFSK 185 I+ H K+ R G +E+ D Y V+ P NY ++KT ES Q L +K Sbjct: 102 IVCLHRKLRQR---GPLELGDIEDLDGYPTVFCPWHNYDFNLKTGESSTGLQDLAAK 155 >SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1315 Score = 29.1 bits (62), Expect = 5.6 Identities = 17/61 (27%), Positives = 27/61 (44%) Query: 278 DPGARGIICGGKGTGKSTMLRYLCNRLLDHGPVLVIDLDPGQAEFTVAGNLSVTIVNEPL 337 DP + I G G GKS+++ L G VL+ +D G + A + EP+ Sbjct: 1100 DPKEKIGIVGRTGAGKSSLVAALFRMPEPKGRVLIDGVDLGNLDIQAARRAIAVVTQEPV 1159 Query: 338 L 338 + Sbjct: 1160 V 1160 >SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) Length = 1440 Score = 28.7 bits (61), Expect = 7.5 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 56 PELGDVAVIDELEVETNPETLTEIASIAVDETMPSENISNEE-DSVDFTNKPN 107 PE+ D + E ET PET E+ S P I +++ D D T PN Sbjct: 1094 PEVEDPQEEADTETETEPETAEEVESDEPLPPPPPPPIPDDDGDDTDSTQLPN 1146 >SB_11721| Best HMM Match : Peptidase_C12 (HMM E-Value=0) Length = 537 Score = 28.3 bits (60), Expect = 9.9 Identities = 14/45 (31%), Positives = 23/45 (51%) Query: 59 GDVAVIDELEVETNPETLTEIASIAVDETMPSENISNEEDSVDFT 103 G A + +LE E+ PE+ +++ DET + ED D+T Sbjct: 342 GVAAGVGDLEKESQPESPISVSTGVPDETGETTETCPSEDQQDYT 386 >SB_9909| Best HMM Match : AAA (HMM E-Value=0) Length = 400 Score = 28.3 bits (60), Expect = 9.9 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 247 SDILGCSLYLKRPLRTYEERPQW--EQAYTYGTDPGARGIICGGKGTGKSTMLRYLCNR 303 SDI GC + + LR E P E+ G +P ++ G GTGK+ R + NR Sbjct: 84 SDIGGCKEQIDK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 141 >SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) Length = 982 Score = 28.3 bits (60), Expect = 9.9 Identities = 13/33 (39%), Positives = 18/33 (54%) Query: 77 TEIASIAVDETMPSENISNEEDSVDFTNKPNLD 109 TE + DE SE +EE+SVDF + P + Sbjct: 648 TEEEEMEEDENWASEGSPSEEESVDFDDDPEFE 680 >SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) Length = 1238 Score = 28.3 bits (60), Expect = 9.9 Identities = 17/54 (31%), Positives = 24/54 (44%) Query: 285 ICGGKGTGKSTMLRYLCNRLLDHGPVLVIDLDPGQAEFTVAGNLSVTIVNEPLL 338 I G G GKS+++ L G VL+ +D G + A I EP+L Sbjct: 1027 IVGRTGAGKSSLVAALFRMPEPKGRVLIDGVDLGTLDIQSARKAMAVITQEPVL 1080 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.316 0.136 0.399 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,597,846 Number of Sequences: 59808 Number of extensions: 464406 Number of successful extensions: 950 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 943 Number of HSP's gapped (non-prelim): 10 length of query: 350 length of database: 16,821,457 effective HSP length: 83 effective length of query: 267 effective length of database: 11,857,393 effective search space: 3165923931 effective search space used: 3165923931 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 60 (28.3 bits)
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