Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001852-TA|BGIBMGA001852-PA|IPR000637|HMG-I and HMG-Y,
DNA-binding, IPR014021|Helicase superfamily 1 and 2 ATP-binding,
IPR001650|Helicase, C-terminal, IPR014001|DEAD-like helicases,
N-terminal, IPR000330|SNF2-related
(3376 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g08600.1 68414.m00953 SNF2 domain-containing protein / helica... 412 e-114
At3g19210.1 68416.m02438 DNA repair protein RAD54, putative simi... 237 9e-62
At5g63950.1 68418.m08030 SNF2 domain-containing protein / helica... 196 2e-49
At5g66750.1 68418.m08414 SNF2 domain-containing protein / helica... 159 2e-38
At2g16390.1 68415.m01876 SNF2 domain-containing protein / helica... 154 1e-36
At4g31900.1 68417.m04533 chromatin remodeling factor, putative s... 153 3e-36
At1g05480.1 68414.m00557 SNF2 domain-containing protein / helica... 146 3e-34
At3g54280.1 68416.m05999 SNF2 domain-containing protein / helica... 142 3e-33
At1g03750.1 68414.m00355 helicase, putative similar to SP|Q03468... 129 3e-29
At2g18760.1 68415.m02184 SNF2 domain-containing protein / helica... 123 2e-27
At2g02090.1 68415.m00145 SNF2 domain-containing protein / helica... 116 3e-25
At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding famil... 107 2e-22
At3g12810.1 68416.m01598 SNF2 domain-containing protein / helica... 104 9e-22
At2g25170.1 68415.m03010 chromatin remodeling factor CHD3 (PICKL... 104 1e-21
At5g43530.1 68418.m05322 SNF2 domain-containing protein / helica... 101 8e-21
At5g19310.1 68418.m02301 homeotic gene regulator, putative simil... 101 8e-21
At3g06010.1 68416.m00686 homeotic gene regulator, putative simil... 101 8e-21
At2g21450.1 68415.m02552 SNF2 domain-containing protein / helica... 100 1e-20
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 100 3e-20
At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar ... 99 4e-20
At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar ... 99 4e-20
At5g22750.1 68418.m02657 SNF2 domain-containing protein / helica... 99 6e-20
At3g57300.1 68416.m06378 transcriptional activator, putative sim... 98 8e-20
At2g44980.1 68415.m05600 transcription regulatory protein SNF2, ... 93 2e-18
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 89 4e-17
At5g20420.1 68418.m02428 SNF2 domain-containing protein / helica... 89 4e-17
At2g44980.2 68415.m05601 transcription regulatory protein SNF2, ... 88 8e-17
At2g28290.2 68415.m03434 chromatin remodeling protein, putative ... 87 1e-16
At2g28290.1 68415.m03433 chromatin remodeling protein, putative ... 87 1e-16
At3g42670.1 68416.m04437 SNF2 domain-containing protein / helica... 84 1e-15
At3g24340.1 68416.m03056 SNF2 domain-containing protein / helica... 79 7e-14
At3g20010.1 68416.m02531 SNF2 domain-containing protein / helica... 79 7e-14
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 78 1e-13
At2g46020.1 68415.m05724 transcription regulatory protein SNF2, ... 77 3e-13
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 75 8e-13
At1g48310.1 68414.m05396 SNF2 domain-containing protein / helica... 75 8e-13
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 74 2e-12
At5g05130.1 68418.m00544 SNF2 domain-containing protein / helica... 70 2e-11
At1g05120.1 68414.m00514 SNF2 domain-containing protein / helica... 70 2e-11
At1g02670.1 68414.m00217 DNA repair protein, putative similar to... 68 1e-10
At3g16600.1 68416.m02122 SNF2 domain-containing protein / helica... 66 5e-10
At2g46020.2 68415.m05725 transcription regulatory protein SNF2, ... 65 9e-10
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 59 6e-08
At3g28770.1 68416.m03591 expressed protein 50 3e-05
At5g40450.1 68418.m04905 expressed protein 50 4e-05
At2g22795.1 68415.m02704 expressed protein 47 2e-04
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 46 4e-04
At3g06980.1 68416.m00829 DEAD/DEAH box helicase, putative contai... 43 0.004
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 42 0.005
At5g50840.2 68418.m06299 expressed protein 42 0.007
At5g50840.1 68418.m06298 expressed protein 42 0.010
At5g07810.1 68418.m00895 SNF2 domain-containing protein / helica... 42 0.010
At1g75150.1 68414.m08729 expressed protein ; expression supporte... 41 0.013
At5g17160.1 68418.m02010 expressed protein 40 0.039
At3g54460.1 68416.m06025 SNF2 domain-containing protein / helica... 40 0.039
At1g56660.1 68414.m06516 expressed protein 39 0.051
At3g32330.1 68416.m04125 DNA repair protein-related weak similar... 38 0.089
At2g30620.1 68415.m03731 histone H1.2 nearly identical to SP|P26... 38 0.12
At5g50830.1 68418.m06297 expressed protein 38 0.16
At4g13110.1 68417.m02043 BSD domain-containing protein contains ... 38 0.16
At4g31880.1 68417.m04531 expressed protein 37 0.21
At3g32280.1 68416.m04116 hypothetical protein 37 0.21
At5g47690.1 68418.m05887 expressed protein 37 0.27
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 37 0.27
At4g29940.1 68417.m04259 pathogenesis-related homeodomain protei... 37 0.27
At4g09730.1 68417.m01598 DEAD/DEAH box helicase, putative RNA he... 37 0.27
At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont... 37 0.27
At1g69070.1 68414.m07903 expressed protein 37 0.27
At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family p... 36 0.36
At2g03140.1 68415.m00267 CAAX amino terminal protease family pro... 36 0.47
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 36 0.47
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 36 0.47
At1g28410.1 68414.m03493 expressed protein 36 0.47
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 36 0.47
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 36 0.47
At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH) domain... 36 0.63
At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related conta... 36 0.63
At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related conta... 36 0.63
At3g31900.1 68416.m04029 hypothetical protein 36 0.63
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 36 0.63
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 35 0.83
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 35 1.1
At5g16500.1 68418.m01928 protein kinase family protein contains ... 34 1.4
At4g37440.1 68417.m05299 expressed protein 34 1.4
At2g44430.1 68415.m05525 DNA-binding bromodomain-containing prot... 34 1.4
At1g74860.1 68414.m08676 expressed protein 34 1.4
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 34 1.4
At5g46760.1 68418.m05760 basic helix-loop-helix (bHLH) family pr... 34 1.9
At5g36740.1 68418.m04402 PHD finger family protein 34 1.9
At5g36670.1 68418.m04388 PHD finger family protein 34 1.9
At4g29060.1 68417.m04157 elongation factor Ts family protein sim... 34 1.9
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 34 1.9
At3g28350.1 68416.m03543 hypothetical protein 34 1.9
At2g21540.1 68415.m02563 SEC14 cytosolic factor, putative / phos... 34 1.9
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 34 1.9
At5g60130.1 68418.m07538 transcriptional factor B3 family protei... 33 2.5
At4g31520.1 68417.m04476 SDA1 family protein contains Pfam profi... 33 2.5
At3g27260.1 68416.m03407 DNA-binding bromodomain-containing prot... 33 2.5
At1g06920.1 68414.m00735 ovate family protein 58% similar to ova... 33 2.5
At5g28940.1 68418.m03581 hypothetical protein 33 3.3
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 33 3.3
At3g61830.1 68416.m06941 transcriptional factor B3 family protei... 33 3.3
At3g18750.1 68416.m02380 protein kinase family protein contains ... 33 3.3
At2g42860.1 68415.m05307 expressed protein 33 3.3
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 33 3.3
At2g16470.1 68415.m01887 zinc finger (CCCH-type) family protein ... 33 3.3
At1g65710.1 68414.m07458 expressed protein ; expression supporte... 33 3.3
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 33 3.3
At1g13260.1 68414.m01539 DNA-binding protein RAV1 (RAV1) identic... 33 3.3
At5g58370.2 68418.m07309 expressed protein 33 4.4
At5g58370.1 68418.m07308 expressed protein 33 4.4
At5g47940.1 68418.m05922 expressed protein 33 4.4
At5g05510.1 68418.m00598 protein kinase-related low similarity t... 33 4.4
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 33 4.4
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 33 4.4
At1g67370.1 68414.m07669 meiotic asynaptic mutant 1 (ASY1) ident... 33 4.4
At1g43770.1 68414.m05040 PHD finger family protein contains Pfam... 33 4.4
At1g06760.1 68414.m00718 histone H1, putative similar to histone... 33 4.4
At1g04300.1 68414.m00421 meprin and TRAF homology domain-contain... 33 4.4
At4g39870.1 68417.m05649 expressed protein hypothetical protein,... 32 5.8
At4g25730.1 68417.m03703 FtsJ-like methyltransferase family prot... 32 5.8
At4g23220.1 68417.m03349 protein kinase family protein contains ... 32 5.8
At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /... 32 5.8
At3g12720.1 68416.m01589 myb family transcription factor contain... 32 5.8
At2g12875.1 68415.m01402 hypothetical protein 32 5.8
At1g79270.1 68414.m09241 expressed protein contains Pfam profile... 32 5.8
At4g24200.1 68417.m03474 expressed protein hypothetical protein ... 32 7.7
At4g23190.1 68417.m03345 protein kinase family protein contains ... 32 7.7
At4g17000.1 68417.m02564 hypothetical protein 32 7.7
At4g13970.1 68417.m02161 expressed protein 32 7.7
At4g04400.1 68417.m00634 hypothetical protein contains Pfam prof... 32 7.7
At4g01090.1 68417.m00147 extra-large G-protein-related contains ... 32 7.7
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 32 7.7
At3g19790.1 68416.m02506 hypothetical protein ; expression suppo... 32 7.7
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 32 7.7
At1g42550.1 68414.m04906 expressed protein 32 7.7
At1g32830.1 68414.m04046 hypothetical protein similar to At2g049... 32 7.7
>At1g08600.1 68414.m00953 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|P46100
Transcriptional regulator ATRX {Homo sapiens}; contains
PFam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain;
non-consensus GC donor splice site at exon boundary 28614
Length = 1457
Score = 412 bits (1015), Expect = e-114
Identities = 226/598 (37%), Positives = 343/598 (57%), Gaps = 47/598 (7%)
Query: 1718 MKAHQYEGVKFMWDACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHTVLTHPGVG 1777
+K HQ G++FMW+ +S+ + +G G GCILAH MGLGKT QV+A L+T + +G
Sbjct: 687 LKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLG 746
Query: 1778 IQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIKVFELSKLKKTYERAYQL-EDWYSGGGIF 1836
++ L+ P++ + NW E KW+ +++F L + + ER + L W GG+F
Sbjct: 747 LKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSR--ERRFDLLTKWRKKGGVF 804
Query: 1837 IIGYELFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDIIVCDEGHLLKNDCSVLAVAMS 1896
++GY FR+LS L + D+ I AL D GPDI+VCDE H++KN + A+
Sbjct: 805 LMGYTNFRNLS-LGRGVKDLNAA--RGICNALRD-GPDILVCDEAHIIKNTKADTTQALK 860
Query: 1897 RVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEFSNRFENPIMNGQHRDSRQED 1956
+V +RRI LTG+P+QNNL EY+CMV+FV+ LG+ EF NRF+NPI NGQH +S ED
Sbjct: 861 QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAED 920
Query: 1957 IRLMKARTHILHKVLEGCLQRQEASVLYPYLPKKHEYTVFIALTQCQWDLYKHYLLHYG- 2015
+++M R+HIL++ L+G +QR + +V+ LP K + + + L+ Q LY+ +L YG
Sbjct: 921 VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELYGF 980
Query: 2016 ------KQTKNSILKDFHILQKIWSHPQVLHIFQTKARDEKAKIKAEKLEDDLAHEDI-- 2067
++ + + + +L +I +HP + + +++ + + +D + E+I
Sbjct: 981 SDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDY 1040
Query: 2068 ---------TSEDIKPAE----TEVWWLQYLDGGKMLDSLESSNKFAAVFQILEECTALG 2114
T D++ + WW+ L S + S K + IL +G
Sbjct: 1041 NMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVS-DFSGKMILLLDILSMSADVG 1099
Query: 2115 DKVLIFSTSLFTLDALEYFLRKI-------KNWSLGHDYYRL----------DGSVPPEV 2157
DK L+FS S+ TLD +E +L ++ K W G D+YRL DG
Sbjct: 1100 DKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRLTLTSLDGCRIDGKTESSE 1159
Query: 2158 RQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRF 2217
RQK FN +N + K LISTRAGSLG+N+ AANRVII+D SWNP +D+Q IFR +R+
Sbjct: 1160 RQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRY 1219
Query: 2218 GQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHYNSAELTELYRFDE 2275
GQ+K + YR +A GT+E+KIY+R VTK+ +A RVVD QQ+ R + E+ L+ FD+
Sbjct: 1220 GQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFDD 1277
Score = 33.9 bits (74), Expect = 1.9
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 118 SKADSTIGGSTVQESQTVLNYCNKSNQ-QITESENVICDKNRSVIVGKKRGRK-PKQKIM 175
S AD + + E + L K+N ++ E +++ CD+ + + +KR +K KQ I
Sbjct: 312 SLADPFLADAIDNERELALTEEQKTNYIRVKEEDDITCDRVLQLRLKRKRRKKRSKQVIR 371
Query: 176 GTRKPSSPPQTYLQEDILSTNMLSNQTEDEESLEINKNHHNRPSKDKIFETNQTTTSEAD 235
+ YL + + N +Q +S E + HN S+ I E + S+ D
Sbjct: 372 CAAENMDDDSVYLDGNNTTPNFAKDQV---KSPETSTQVHN--SEVNIEENGNFSNSDVD 426
Query: 236 S---TNNIEMSAECTNSSNDLKMKICPKAKEKIFPSHSY 271
+ +I + A+ +S N C + HS+
Sbjct: 427 KMTPSTHINVDAKRDDSQNPANNFRCTACNKVAVEVHSH 465
>At3g19210.1 68416.m02438 DNA repair protein RAD54, putative similar
to RAD54 GB:CAA71278 from [Drosophila melanogaster] (Mol.
Cell. Biol.(1997) 17 (10), 6097-6104)
Length = 852
Score = 237 bits (580), Expect = 9e-62
Identities = 174/572 (30%), Positives = 280/572 (48%), Gaps = 56/572 (9%)
Query: 1700 DFEENRPVVTIHPFFTKVMKAHQYEGVKFMWDACFESVEHIAAGKPGSGCILAHCMGLGK 1759
D N + +H K ++ HQ EGV+FM+D C + H +A +GCILA MGLGK
Sbjct: 58 DLLSNVTTIMVHSVLVKFLRPHQREGVQFMFD-CVSGL-HGSANI--NGCILADDMGLGK 113
Query: 1760 TLQVLALLHTVLTHPGVG---IQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIKVFELSKL 1816
TLQ + LL+T+L G +++ ++ P S V NW EI KW+G I + E ++
Sbjct: 114 TLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTR- 172
Query: 1817 KKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDII 1876
S + II YE FR S+ + + D++
Sbjct: 173 DDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESC-----------------DLL 215
Query: 1877 VCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEF 1936
+CDE H LKND ++ A++ + +RR++L+GTPMQN+L E+F MVNF P LG + F
Sbjct: 216 ICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHF 275
Query: 1937 SNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPYLPKKHEYTVF 1996
+ +E PI+ G+ + +E+ L R+ L + + R+ ++L +LP K V
Sbjct: 276 RHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVC 335
Query: 1997 IALTQCQWDLYKHY---------LLHYGKQTKNSILKDFHILQKIWSHPQVLHIFQTKAR 2047
+T Q LY H+ L KQTK +L L+K+ +HP++ I+ T
Sbjct: 336 CKMTTLQSTLYNHFISSKNLKRALADNAKQTK--VLAYITALKKLCNHPKL--IYDTIKS 391
Query: 2048 DEKAKIKAEKLEDDLAHEDITSEDIKPAETEVWWLQYLDGGKMLDSLESSNKFAAVFQIL 2107
+ E + E + + W++ GKM + + + L
Sbjct: 392 GNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVEL--SGKM-------HVLSRLLANL 442
Query: 2108 EECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFNA 2167
T D++++ S TLD R+ + + + RLDGS RQK N
Sbjct: 443 RRKT--DDRIVLVSNYTQTLDLFAQLCRERR-----YPFLRLDGSTTISKRQKLVNRLND 495
Query: 2168 ENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYR 2227
+ FL+S++AG GLN+ ANR+++ D WNPA+D Q RV+R GQ+K Y+YR
Sbjct: 496 PTKDEF-AFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYR 554
Query: 2228 FVAMGTMEQKIYERSVTKQAVACRVVDEQQIE 2259
F++ GT+E+K+Y+R ++K+ + +V+ +Q +
Sbjct: 555 FLSTGTIEEKVYQRQMSKEGLQ-KVIQHEQTD 585
>At5g63950.1 68418.m08030 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|Q03468
Excision repair protein ERCC-6 (Cockayne syndrome protein
CSB) {Homo sapiens}; contains PFam profiles PF00271:
Helicase conserved C-terminal domain, PF00176: SNF2
family N-terminal domain
Length = 1090
Score = 196 bits (478), Expect = 2e-49
Identities = 162/561 (28%), Positives = 271/561 (48%), Gaps = 52/561 (9%)
Query: 1721 HQYEGVKFMWDACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHTVLTHPGVGIQR 1780
HQ EG+ ++W + G G IL MGLGKT+Q+ + L L H + I+R
Sbjct: 380 HQREGLNWLWSLHTQ----------GKGGILGDDMGLGKTMQICSFL-AGLFHSKL-IKR 427
Query: 1781 VLVCCPLSTVLNWVDEIHKWIGPVTNQIKVFELSKLKKTYERAYQLEDWYSGGGIFIIGY 1840
LV P + + +W+ E+ +G + + S T R Y L G GI + Y
Sbjct: 428 ALVVAPKTLLPHWMKELAT-VGLSQMTREYYGTS----TKAREYDLHHILQGKGILLTTY 482
Query: 1841 ELFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVAT 1900
++ R+ +T + DD ++ D ++ DEGHL+KN + A ++ + +
Sbjct: 483 DIVRN-NTKALQGDDHYTDEDDEDGNKW-----DYMILDEGHLIKNPNTQRAKSLLEIPS 536
Query: 1901 RRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEFSNRFENPIMNGQHRDSRQEDIRLM 1960
RI+++GTP+QNNL+E + + NF P LLG + F +E+ I+ G +++ + R+
Sbjct: 537 SHRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIG 596
Query: 1961 KARTHILHKVLEGCLQRQEASVLY------PYLPKKHEYTVFIALTQCQWDLYKHYLLH- 2013
L + ++ R+ S ++ L KK E V++ LT CQ LY+ +L
Sbjct: 597 STVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLNSE 656
Query: 2014 -YGKQTKNSILKDFHILQKIWSHPQVLHIFQTKARDEKAKIKAEKLEDDLAHEDITSEDI 2072
S L IL+KI HP +L K AE + + + +T E+
Sbjct: 657 IVLSAFDGSPLAALTILKKICDHPLLL-----------TKRAAEDVLEGM-DSTLTQEEA 704
Query: 2073 KPAETEVWWL-QYLDGGKMLDSLES-SNKFAAVFQILEECTALGDKVLIFSTSLFTLDAL 2130
AE + +D +S S K + + +LE G +VLIFS + L+ +
Sbjct: 705 GVAERLAMHIADNVDTDDFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLI 764
Query: 2131 EYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMT 2190
+ L S G+ + R+DG+ R K EF E ++ +FL++++ G LGL +T
Sbjct: 765 QDSLT-----SNGYSFLRIDGTTKAPDRLKTVEEFQ-EGHV-APIFLLTSQVGGLGLTLT 817
Query: 2191 AANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVAC 2250
A+RVI++D +WNP+ D Q + R YR GQ KD +YR + T+E+KIY + V K +
Sbjct: 818 KADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGLFK 877
Query: 2251 RVVDEQQIERHYNSAELTELY 2271
+ ++ R+++ +L EL+
Sbjct: 878 TATEHKEQIRYFSQQDLRELF 898
>At5g66750.1 68418.m08414 SNF2 domain-containing protein / helicase
domain-containing protein similar to
proliferation-associated SNF2-like protein [Homo sapiens]
GI:8980660; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 764
Score = 159 bits (387), Expect = 2e-38
Identities = 149/555 (26%), Positives = 251/555 (45%), Gaps = 68/555 (12%)
Query: 1718 MKAHQYEGVKFMWDACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHTVLTHPGVG 1777
+K++Q +GVK++ I+ + G ILA MGLGKT+Q + L + G G
Sbjct: 202 LKSYQLKGVKWL----------ISLWQNGLNGILADQMGLGKTIQTIGFLSHL---KGNG 248
Query: 1778 IQR-VLVCCPLSTVLNWVDEIHKWIGPVTNQIKVFELSKLKKTYERAYQLEDWYSGGGIF 1836
+ LV PLST+ NW +EI ++ P N I + R + + I
Sbjct: 249 LDGPYLVIAPLSTLSNWFNEIARFT-PSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIV 307
Query: 1837 IIGYELFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDIIVCDEGHLLKNDCSVLAVAMS 1896
I YE+ +N + L +V DEGH LKN L +
Sbjct: 308 ITSYEV-----------------AMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELK 350
Query: 1897 RVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEFSNRFENPIMNGQHRDSRQED 1956
+ +++LTGTP+QNNL E + ++NF+ P++ ++ EF + F+ N +E+
Sbjct: 351 HLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEE 410
Query: 1957 IRLMKARTHILHKVLEGCLQRQEASVLYPYLPKKHEYTVFIALTQCQWDLYKHYLLHYGK 2016
R + + LH +L + R+ + LP+K E ++ +T Q K + H
Sbjct: 411 KRRAQVVSK-LHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQ----KKFQEHLVN 465
Query: 2017 QTKNSILKDFHILQKIWSHPQVLHIFQTKARDEKAKIKAEKLEDDLAHEDITSEDIKPAE 2076
T + L + I + W + K + +++ DL I + P
Sbjct: 466 NTLEAHLGENAIRGQGW---------KGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPV 516
Query: 2077 TEVWWLQYLDGGKMLDSLESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRK 2136
E+ + KF + ++L A KVLIFS LD ++Y+ +
Sbjct: 517 EEI--------------VGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSE 562
Query: 2137 IKNWSLGHDYYRLDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVI 2196
G + R+DGSV + R++ ++F+ E + +FL+STRAG LG+N+TAA+ I
Sbjct: 563 -----KGFEVCRIDGSVKLDERRRQIKDFSDEKS-SCSIFLLSTRAGGLGINLTAADTCI 616
Query: 2197 ILDTSWNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQ 2256
+ D+ WNP D+Q + R +R GQ K ++YR ++E ++ +R+ +K + V+ +
Sbjct: 617 LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVIGQG 676
Query: 2257 QI--ERHYNSAELTE 2269
Q ER +S L E
Sbjct: 677 QFHQERAKSSTPLEE 691
>At2g16390.1 68415.m01876 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to RAD54
[Drosophila melanogaster] GI:1765914; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain
Length = 888
Score = 154 bits (373), Expect = 1e-36
Identities = 140/546 (25%), Positives = 249/546 (45%), Gaps = 52/546 (9%)
Query: 1711 HPFFTKVMKAHQYEGVKFMWDACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHTV 1770
HP MK HQ EG +F+ C ++ A PG GCI+AH G GKT +++ + +
Sbjct: 343 HPTHAAEMKPHQIEGFQFL---C----SNLVADDPG-GCIMAHAPGSGKTFMIISFMQSF 394
Query: 1771 LT-HPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIKVFELSKLKKTYERAYQLEDW 1829
L +P + LV P + W E +W + + +K + ++ L+ W
Sbjct: 395 LAKYPQA---KPLVVLPKGILPTWKKEFVRWQVEDIPLLDFYS-AKAENRAQQLSILKQW 450
Query: 1830 YSGGGIFIIGYELFRSLSTLDPELDDIR-PTIVNKIRTALLDPGPDIIVCDEGHLLKNDC 1888
I +GY+ F ++ D D + I+ K+ P I++ DEGH +N+
Sbjct: 451 MEKKSILFLGYQQFSTI-VCDDTTDSLSCQEILLKV--------PSILILDEGHTPRNED 501
Query: 1889 SVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEFSNRFENPIMNGQ 1948
+ L ++++V T R++VL+GT QN+++E F ++N V+P L + S I+
Sbjct: 502 TNLLQSLAQVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKL--DTSKSAVKRILAYT 559
Query: 1949 HRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPYLPKKHEYTVFIALTQCQWDLYK 2008
D R + ++ +E LQ+ E ++TV I + Q ++ K
Sbjct: 560 PCDVRGRLTGSNSDMASMFNETVEHTLQKSE------------DFTVKIKVIQDLREMTK 607
Query: 2009 HYLLHYGKQTKNSI--LKDFHILQKIWSHPQVLHIFQTKARDEKAKIKAEKLEDDL-AHE 2065
L +Y + + L DF ++ + P+ L+ + K R EK K K + + H
Sbjct: 608 KVLHYYKGDFLDELPGLADFTVVLNL--SPKQLNEVK-KLRREKRKFKVSAVGSAIYLHP 664
Query: 2066 DITSEDIKPAETEVWWLQYLDGGKMLDSLESSNKFAAVF--QILEECTALGDKVLIFSTS 2123
+ K + + +M++ L+ + A F ++ C + G+K+L+FS
Sbjct: 665 KLKVFSDKSDDVSDTTMD-----EMVEKLDLNEGVKAKFFLNLINLCDSAGEKLLVFSQY 719
Query: 2124 LFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAG 2183
L L LE K W LG + + L G+ E R+ FN+ + K+F S +A
Sbjct: 720 LIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETFNSSPD--AKIFFGSIKAC 777
Query: 2184 SLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSV 2243
G+++ A+R++ILD NP+ Q I R +R GQ+K + YR +A + E++ +
Sbjct: 778 GEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMVHAYRLIAGSSPEEEDHNTCF 837
Query: 2244 TKQAVA 2249
K+ ++
Sbjct: 838 KKEVIS 843
>At4g31900.1 68417.m04533 chromatin remodeling factor, putative strong
similarity to chromatin remodeling factor CHD3 (PICKLE)
[Arabidopsis thaliana] GI:6478518; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1202
Score = 153 bits (370), Expect = 3e-36
Identities = 152/514 (29%), Positives = 238/514 (46%), Gaps = 87/514 (16%)
Query: 1750 ILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIK 1809
ILA MGLGKT+Q +A L ++ + LV PLST+ NW E W P N +
Sbjct: 247 ILADEMGLGKTIQSIAFLASLFEE---NLSPHLVVAPLSTIRNWEREFATW-APHMNVVM 302
Query: 1810 VFELSKLKKTY--ERAYQLEDWYSGGGIFIIGYELFR-SLSTLDPELDDIRPTIVNKIRT 1866
S+ + Y E S + + YE+ +S L P I+ T +
Sbjct: 303 YTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSP----IKWTCM----- 353
Query: 1867 ALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVK 1926
+ DEGH LKN S L ++S+ ++ ++LTGTP+QNNL E F +++F+
Sbjct: 354 ----------IIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLD 403
Query: 1927 PNLLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEG-CLQRQEASVLYP 1985
+ G+ +F + +N + + SR LH++L L+R + VL
Sbjct: 404 ADKFGSLEKFQD------INKEEQISR-------------LHQMLAPHLLRRLKKDVLKD 444
Query: 1986 YLPKKHEYTVFIALTQCQWDLYKHYLLHYGKQTKNSILKDFHILQKIWSHPQVLHIFQTK 2045
+P K E + + ++ Q ++YK + T N QVL TK
Sbjct: 445 KVPPKKELILRVDMSSQQKEVYKAVI------TNNY---------------QVL----TK 479
Query: 2046 ARDEKAKIKAEKLEDDLAHEDITSEDIKPAETEVWWLQYLDGGKMLDSL-ESSNKFAAVF 2104
RD K KL +H + D +P ++ D + L E+S K +
Sbjct: 480 KRDAKISNVLMKLRQVCSHPYLLP-DFEP--------RFEDANEAFTKLLEASGKLQLLD 530
Query: 2105 QILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCRE 2164
+++ + G +VLI++ TL LE + KNW+ Y R+DG + RQ
Sbjct: 531 KMMVKLKEQGHRVLIYTQFQHTLYLLEDYFT-FKNWN----YERIDGKISGPERQVRIDR 585
Query: 2165 FNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCY 2224
FNAEN+ + FL+STRAG +G+N+ A+ VII D+ WNP D+Q + RV+R GQ
Sbjct: 586 FNAENSNRF-CFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVM 644
Query: 2225 IYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQI 2258
IYR + GT+E+++ E + K + VV +Q +
Sbjct: 645 IYRLIHKGTVEERMMEITKNKMLLEHLVVGKQHL 678
>At1g05480.1 68414.m00557 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|Q9U7E0
Transcriptional regulator ATRX homolog {Caenorhabditis
elegans}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 588
Score = 146 bits (353), Expect = 3e-34
Identities = 142/563 (25%), Positives = 239/563 (42%), Gaps = 67/563 (11%)
Query: 1718 MKAHQYEGVKFMWD-----ACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHTVLT 1772
M HQ EG +F+W ++ GCI++H G GKT + L L
Sbjct: 1 MYPHQQEGFEFIWKNLAGTIMLNELKDFENSDETGGCIMSHAPGTGKTRLTIIFLQAYLQ 60
Query: 1773 -HPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVT-------------NQIKVFELSKLKK 1818
P + ++ P S +L W +E KW + N + L +
Sbjct: 61 CFPDC---KPVIIAPASLLLTWAEEFKKWNISIPFHNLSSLDFTGKENSAALGLLMQKNA 117
Query: 1819 TYE-----RAYQLEDWYSGGGIFIIGYELFRSLSTLDPE------LDDIRPTI-VNKIRT 1866
T R ++ W I I Y L+ L+ + E + +++P ++ IR
Sbjct: 118 TARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAGVKDEDKKTKMVREVKPDKELDDIRE 177
Query: 1867 ALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVK 1926
L+ P ++V DE H +N S + +S+V T++RI+L+GTP QNN E ++ +
Sbjct: 178 ILMGR-PGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLAR 236
Query: 1927 PNLLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPY 1986
P L ++ + M R + + L V+ + + S+L
Sbjct: 237 PKYL---ERLTSTLKKSGMTVTKRGKKNLGNEINNRGIEELKAVMLPFVHVHKGSILQSS 293
Query: 1987 LPKKHEYTVFIALTQCQWDLYKHYLLHYGKQTKNSILKDFHILQKIWSHPQVLHIFQTKA 2046
LP E V + + Q + + + + ++TKN + + H L + HP ++
Sbjct: 294 LPGLRECVVVLNPPELQRRVLESIEVTHNRKTKN-VFETEHKLSLVSVHPSLV------- 345
Query: 2047 RDEKAKIKAEKLEDDLAHEDITSEDIKPAETEVWWLQYLDGGKMLDSLESSNKFAAVFQI 2106
+ KI +EK + L+ ++ +K LD +S K + +
Sbjct: 346 --SRCKI-SEK--ERLSIDEALLAQLKKVR--------------LDPNQSV-KTRFLMEF 385
Query: 2107 LEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFN 2166
+E C + +KVL+FS + L + L W+ G + + G + + RQ EFN
Sbjct: 386 VELCEVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFN 445
Query: 2167 AENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIY 2226
+ K K+FL ST+A S G+++ A+RVI+LD WNPA + Q I R YR GQ++ Y Y
Sbjct: 446 DPKS-KAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTY 504
Query: 2227 RFVAMGTMEQKIYERSVTKQAVA 2249
VA GT E Y + K ++
Sbjct: 505 HLVAKGTPEGPKYCKQAQKDRIS 527
>At3g54280.1 68416.m05999 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|O14981
TBP-associated factor 172 (TAF-172) (TAF(II)170) {Homo
sapiens}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 2049
Score = 142 bits (345), Expect = 3e-33
Identities = 142/561 (25%), Positives = 248/561 (44%), Gaps = 67/561 (11%)
Query: 1750 ILAHCMGLGKTLQVLALLHTVLTHPGVGIQRV-----LVCCPLSTVLNWVDEIHKWIGPV 1804
IL MGLGKTLQ A++ + + ++ CP + V +W EI K+I
Sbjct: 1466 ILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSIIVCPSTLVGHWAFEIEKYI--- 1522
Query: 1805 TNQIKVFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKI 1864
+ + + + + + L + ++ + I Y++ R ++D + N
Sbjct: 1523 --DLSLLSVLQYVGSAQDRVSLREQFNNHNVIITSYDVVRK------DVDYLTQFSWN-- 1572
Query: 1865 RTALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNF 1924
+ DEGH++KN S + A+ ++ + R++L+GTP+QNN+ E + + +F
Sbjct: 1573 ----------YCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDF 1622
Query: 1925 VKPNLLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLY 1984
+ P LGT +F + P++ + +D LHK + L R+ +
Sbjct: 1623 LMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVL 1682
Query: 1985 PYLPKKHEYTVFIALTQCQWDLYKHYLLHYGKQTKNSILKDFHILQK----IWSHPQVLH 2040
LP+K + L+ Q LY+ + KQ +SI+K + H
Sbjct: 1683 SDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTH 1742
Query: 2041 IFQTKARDEKAKIKAEKLEDDLAHEDITSEDIKPAETEVWWLQYLDGGKMLDSLESSNKF 2100
+FQ A K+ + L L D +E + ++ D L ++ S K
Sbjct: 1743 VFQ--ALQYLLKLCSHPL---LVLGDKVTEPVA-SDLAAMINGCSDIITELHKVQHSPKL 1796
Query: 2101 AAVFQILEECTALGD-------------KVLIFSTSLFTLDALEYFLRKIKNWSLGHDYY 2147
A+ +ILEEC D +VLIF+ LD +E L + S+ Y
Sbjct: 1797 VALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSV--TYM 1854
Query: 2148 RLDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHD 2207
RLDGSV PE R + + FN++ I + L++T G LGLN+T+A+ ++ ++ WNP D
Sbjct: 1855 RLDGSVVPEKRFEIVKAFNSDPTID--VLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRD 1912
Query: 2208 -----------IQGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVD-E 2255
Q + R +R GQ++ ++R + GT+E+K+ K +VA V++ E
Sbjct: 1913 HQFANIELNKLWQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAE 1972
Query: 2256 QQIERHYNSAELTELYRFDET 2276
+ N+ +L +L+ ET
Sbjct: 1973 NASMKTMNTDQLLDLFASAET 1993
>At1g03750.1 68414.m00355 helicase, putative similar to SP|Q03468
Excision repair protein ERCC-6 (Cockayne syndrome protein
CSB) {Homo sapiens}; contains Pfam profiles PF00271:
Helicase conserved C-terminal domain, PF00176: SNF2
family N-terminal domain, PF02810: SEC-C motif
Length = 862
Score = 129 bits (312), Expect = 3e-29
Identities = 65/176 (36%), Positives = 108/176 (61%), Gaps = 7/176 (3%)
Query: 2091 LDSLESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLD 2150
L ++ K A+ +++ + GDK+L+FS S+ LD LE FL + G+ + RLD
Sbjct: 521 LSDVKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIR-----KGYSFARLD 575
Query: 2151 GSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQG 2210
GS P +RQ +FNA + ++FLIST+AG LGLN+ +ANRV+I D +WNP+HD+Q
Sbjct: 576 GSTPTNLRQSLVDDFNASPS--KQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQA 633
Query: 2211 IFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHYNSAE 2266
R +R+GQ++ ++R ++ G++E+ +Y R V KQ ++ V + R++ +
Sbjct: 634 QDRSFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAVAGKMETRYFEGVQ 689
Score = 93.9 bits (223), Expect = 2e-18
Identities = 82/316 (25%), Positives = 139/316 (43%), Gaps = 45/316 (14%)
Query: 1706 PVVTIHPFFTKVMKAHQYEGVKFMWDACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLA 1765
P++ + + HQ EGVKFM++ K G IL MGLGKT+Q +A
Sbjct: 127 PIIHVPASINCRLLEHQREGVKFMYNLY----------KNNHGGILGDDMGLGKTIQTIA 176
Query: 1766 LLHTVLTHPGVGIQR---------VLVCCPLSTVLNWVDEIHKWIGPVTNQIKVFELSKL 1816
L V G + VL+ CP S + NW E +W ++ V+ S
Sbjct: 177 FLAAVYGKDGDAGESCLLESDKGPVLIICPSSIIHNWESEFSRWASFF--KVSVYHGSNR 234
Query: 1817 KKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDII 1876
E+ G + + ++ FR I+ +++ I +I+
Sbjct: 235 DMILEKLKA-----RGVEVLVTSFDTFR-----------IQGPVLSGINW-------EIV 271
Query: 1877 VCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEF 1936
+ DE H LKN+ S L A + T++RI LTGT MQN + E F + +V P LGT F
Sbjct: 272 IADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFNLFEWVAPGSLGTREHF 331
Query: 1937 SNRFENPIMNGQHRDSRQEDIRLM-KARTHILHKVLEGCLQRQEASVLYPYLPKKHEYTV 1995
+ ++ P+ GQ + + +++ K + H+ + + L+R + + + K + V
Sbjct: 332 RDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRRTKEETIGHLMMGKEDNVV 391
Query: 1996 FIALTQCQWDLYKHYL 2011
F ++Q Q +Y+ +
Sbjct: 392 FCQMSQLQRRVYQRMI 407
>At2g18760.1 68415.m02184 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|Q03468 Excision
repair protein ERCC-6 (Cockayne syndrome protein CSB)
{Homo sapiens}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1187
Score = 123 bits (297), Expect = 2e-27
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 7/177 (3%)
Query: 2095 ESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVP 2154
E S K V ++L+ G +VL+FS + LD LE FL + N + Y R+DG P
Sbjct: 724 ERSGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFL--VAN---EYSYRRMDGLTP 778
Query: 2155 PEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRV 2214
+ R EFN N+ +F+++T+ G LG N+T ANRVII D WNP++D+Q R
Sbjct: 779 VKQRMALIDEFN--NSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERA 836
Query: 2215 YRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHYNSAELTELY 2271
+R GQ+KD +YR + GT+E+K+Y R + K + +++ Q R + + ++ +L+
Sbjct: 837 WRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLF 893
Score = 74.5 bits (175), Expect = 1e-12
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 6/168 (3%)
Query: 1877 VCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEF 1936
V DEGH ++N S + + ++ T RI++TG P+QN L E + + +FV P LG F
Sbjct: 543 VLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVF 602
Query: 1937 SNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPYLPKKHEYTVF 1996
F PI G + ++ + +L ++ L R+ + + +L KK E+ +F
Sbjct: 603 EAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLF 662
Query: 1997 IALTQCQWDLYKHYLLHYGKQ-----TKNSILKDFHILQKIWSHPQVL 2039
+LT Q Y+ +L + +NS L +++KI +HP +L
Sbjct: 663 CSLTVEQRSTYRAFLASSEVEQIFDGNRNS-LYGIDVMRKICNHPDLL 709
Score = 37.9 bits (84), Expect = 0.12
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1747 SGCILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKW 1800
+G I+ MGLGKT+QVL+ L ++ H + ++ CP++ + W E KW
Sbjct: 404 AGGIIGDEMGLGKTIQVLSFLGSL--HFSKMYKPSIIICPVTLLRQWRREAQKW 455
>At2g02090.1 68415.m00145 SNF2 domain-containing protein / helicase
domain-containing protein similar to transcriptional
activator SRCAP [Homo sapiens] GI:5106572; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain
Length = 763
Score = 116 bits (279), Expect = 3e-25
Identities = 152/577 (26%), Positives = 251/577 (43%), Gaps = 84/577 (14%)
Query: 1714 FTKVMKAHQYEGVKFMWDACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHTVLTH 1773
F ++K +Q GV F+ + +E G ILA MGLGKT+Q + L T+L+
Sbjct: 209 FQPILKPYQLVGVNFLLLLYKKGIE---------GAILADEMGLGKTIQAITYL-TLLSR 258
Query: 1774 PGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIKVFELSKLKKTYERAYQLEDWYSGG 1833
LV CP S + NW E+ KW T + + + Y R +L G
Sbjct: 259 LNNDPGPHLVVCPASVLENWERELRKWCPSFT--VLQYH-GAARAAYSR--ELNSLSKAG 313
Query: 1834 -----GIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDIIVCDEGHLLKNDC 1888
+ ++ Y LF S + + DD + ++ + R + ++ DE H LK+
Sbjct: 314 KPPPFNVLLVCYSLFERHS--EQQKDDRK--VLKRWRWS-------CVLMDEAHALKDKN 362
Query: 1889 SVLAVAMSRVA--TRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEFSNRFENPIMN 1946
S + VA +R++LTGTP+QN+L E + ++ F+ P++ T N ++N
Sbjct: 363 SYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTT----ENVDLKKLLN 418
Query: 1947 GQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPYLPKKHEYTVFIALTQCQWDL 2006
ED L+ IL + L+R ++ V+ +P K + ++ + + Q D
Sbjct: 419 A-------EDTELITRMKSILGPFI---LRRLKSDVMQQLVP-KIQRVEYVLMERKQEDA 467
Query: 2007 YKHYLLHYGKQTKNSIL----KDFHILQKIWSHPQVLHIFQTKARDEKAKIKAEKLEDDL 2062
YK + Y ++ ++ K + L K Q+ + F + + ++ D
Sbjct: 468 YKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSD- 526
Query: 2063 AHEDITSEDIKPAETEVWWLQ-YLDGGKMLDSLESSNKF---AAVFQ--ILEECTALGDK 2116
ED+ K + + LD ++++ ++ N F +FQ + + L DK
Sbjct: 527 --EDVIRIARKLHPIGAFGFECSLD--RVIEEVKGFNDFRIHQLLFQYGVNDTKGTLSDK 582
Query: 2117 VLIFSTSLFTLDALEYFLRK----------------IKNWSL---GHDYYRLDGSVPPEV 2157
++ S TL L ++K I W+L G Y RLDGS
Sbjct: 583 HVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTD 642
Query: 2158 RQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRF 2217
RQ FN + +I L+STRAG GLN+T A+ VII D +NP D Q R +R
Sbjct: 643 RQTIVDTFNNDKSIFA--CLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRI 700
Query: 2218 GQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVD 2254
GQ K I+R V T+++ IYE + K + V++
Sbjct: 701 GQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLE 737
>At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to SP|O14647
Chromodomain-helicase-DNA-binding protein 2 (CHD-2) {Homo
sapiens}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00385: 'chromo' (CHRromatin
Organization MOdifier)
Length = 1722
Score = 107 bits (256), Expect = 2e-22
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 2086 DGGKMLDSLESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHD 2145
D K+ + SS K + ++L +VLIFS + LD L +L G
Sbjct: 925 DNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSL-----RGFQ 979
Query: 2146 YYRLDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPA 2205
+ RLDGS E+RQ+ FNA + FL+STRAG LG+N+ A+ V+I D+ WNP
Sbjct: 980 FQRLDGSTKAELRQQAMDHFNAPAS-DDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQ 1038
Query: 2206 HDIQGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHYNSA 2265
+D+Q + R +R GQ++ IYRFV ++E++I ER+ K + V+ + E
Sbjct: 1039 NDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKR 1098
Query: 2266 ELTELYRFDE 2275
E + FD+
Sbjct: 1099 ETKKGSNFDK 1108
Score = 74.1 bits (174), Expect = 1e-12
Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 22/223 (9%)
Query: 1750 ILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIK 1809
ILA MGLGKT+Q +++L + + LV PLST+ NW E KW+ P N I
Sbjct: 647 ILADEMGLGKTVQSVSMLGFLQNTQQIP-GPFLVVVPLSTLANWAKEFRKWL-PGMNII- 703
Query: 1810 VFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALL 1869
V+ ++ + E + D + G + L+T + L D +++KI+ L
Sbjct: 704 VYVGTRASR--EVRNKTNDVHKVGRPI----KFNALLTTYEVVLKD--KAVLSKIKWIYL 755
Query: 1870 DPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNL 1929
+ DE H LKN + L A+ +T+ ++++TGTP+QN++ E + +++F+ P
Sbjct: 756 -------MVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGK 808
Query: 1930 LGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLE 1972
EF ++N +S ++ L + R HIL +V++
Sbjct: 809 FKNKDEFVENYKN---LSSFNESELANLHL-ELRPHILRRVIK 847
>At3g12810.1 68416.m01598 SNF2 domain-containing protein / helicase
domain-containing protein similar to transcriptional
activator SRCAP [Homo sapiens] GI:5106572; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain
Length = 2055
Score = 104 bits (250), Expect = 9e-22
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 2099 KFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVR 2158
K + +L + G + LIF+ LD LE F+ G+ Y RLDGS PPE R
Sbjct: 1076 KLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLY-----GYTYMRLDGSTPPEER 1130
Query: 2159 QKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFG 2218
Q + FN N K LF++STR+G +G+N+ A+ VI D+ WNPA D Q R +R G
Sbjct: 1131 QTLMQRFNT--NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIG 1188
Query: 2219 QRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHY 2262
Q ++ +IYR ++ T+E+ I +++ K+ + V+ + +
Sbjct: 1189 QTREVHIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTEF 1232
Score = 94.7 bits (225), Expect = 1e-18
Identities = 87/295 (29%), Positives = 136/295 (46%), Gaps = 34/295 (11%)
Query: 1750 ILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIK 1809
ILA MGLGKT+ +ALL + G+ ++V P S +LNW E KW P +
Sbjct: 558 ILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVV-PTSVMLNWETEFLKWC-PAFKILT 615
Query: 1810 VFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALL 1869
F +K ER + + W + ++T + D + K + +L
Sbjct: 616 YFGSAK-----ERKLKRQGWMKLNSFHVC-------ITTYRLVIQDSKMFKRKKWKYLIL 663
Query: 1870 DPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNL 1929
D E HL+KN S + ++RRI+LTGTP+QN+L E + +++F+ P++
Sbjct: 664 D---------EAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHV 714
Query: 1930 LGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPYLPK 1989
++ EF + F NPI QE I K LH VL L R+ + LP
Sbjct: 715 FQSHQEFKDWFCNPIAG---MVEGQEKIN--KEVIDRLHNVLRPFLLRRLKRDVEKQLPS 769
Query: 1990 KHEYTVFIALTQCQWDLYKHYLLHYGKQ---TKNSILKDFHI---LQKIWSHPQV 2038
KHE+ +F L++ Q +LY+ ++ Q T S I L+K+ +HP +
Sbjct: 770 KHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFFGMISIIMQLRKVCNHPDL 824
>At2g25170.1 68415.m03010 chromatin remodeling factor CHD3 (PICKLE)
identical to chromatin remodeling factor CHD3
[Arabidopsis thaliana] GI:6478518
Length = 1384
Score = 104 bits (249), Expect = 1e-21
Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 7/180 (3%)
Query: 2094 LESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSV 2153
LES K + +++ + G +VLI++ LD LE + K W Y R+DG V
Sbjct: 591 LESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTH-KKWQ----YERIDGKV 645
Query: 2154 PPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFR 2213
RQ FNA+N+ K FL+STRAG LG+N+ A+ VII D+ WNP D+Q + R
Sbjct: 646 GGAERQIRIDRFNAKNSNKF-CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMAR 704
Query: 2214 VYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHYNSAELTELYRF 2273
+R GQ IYR + GT+E+++ + + K + VV + + + + N EL ++ R+
Sbjct: 705 AHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQ-NINQEELDDIIRY 763
Score = 88.2 bits (209), Expect = 8e-17
Identities = 100/358 (27%), Positives = 159/358 (44%), Gaps = 36/358 (10%)
Query: 1750 ILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIK 1809
ILA MGLGKT+Q +ALL ++ + LV PLST+ NW E W P N +
Sbjct: 295 ILADEMGLGKTIQSIALLASLFEE---NLIPHLVIAPLSTLRNWEREFATW-APQMNVVM 350
Query: 1810 VFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELD---DIRPTIVNKIR- 1865
F ++ + ++Y I + +S+ + D+ T I
Sbjct: 351 YFGTAQARAVIRE----HEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINL 406
Query: 1866 -TALLDPGP-DIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVN 1923
+A+L P + ++ DEGH LKN S L ++++ ++ RI+LTGTP+QNNL E F +++
Sbjct: 407 DSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMH 466
Query: 1924 FVKPNLLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVL 1983
F+ G+ EF F++ +N + + SR LHK+L L R+ +
Sbjct: 467 FLDAGKFGSLEEFQEEFKD--INQEEQISR-------------LHKMLAPHLLRRVKKDV 511
Query: 1984 YPYLPKKHEYTVFIALTQCQWDLYKH-YLLHYGKQTKN-----SILKDFHILQKIWSHPQ 2037
+P K E + + L+ Q + YK + +Y TK S+ L+K+ HP
Sbjct: 512 MKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCCHPY 571
Query: 2038 VLHIFQTKARDEKAKIKAEKLEDDLAHEDITSEDIKPAETEVWWLQYLDGGKMLDSLE 2095
+L + D K + LE + + +K E L Y MLD LE
Sbjct: 572 MLEGVEPVIHDANEAFK-QLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLE 628
>At5g43530.1 68418.m05322 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P36607 DNA repair protein rad8
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 1277
Score = 101 bits (242), Expect = 8e-21
Identities = 59/180 (32%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 2095 ESSNKFAAVFQILEEC--TALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGS 2152
+ S+K + + + LE+ + G+K ++FS LD LE LR+ G ++ R DG
Sbjct: 1106 KESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRR-----RGFEFLRFDGK 1160
Query: 2153 VPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIF 2212
+ + R+K +EFN E KT + L+S +AG +GLN+TAA+ V ++D WNPA + Q I
Sbjct: 1161 LAQKGREKVLKEFN-ETKQKT-ILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIM 1218
Query: 2213 RVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHYNSAELTELYR 2272
R++R GQ++ ++ RF+ T+E+++ + KQ + + ++++ R EL L+R
Sbjct: 1219 RIHRIGQKRTVFVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEV-RSARLEELKMLFR 1277
Score = 42.3 bits (95), Expect = 0.005
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 1876 IVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSE 1935
IV DE H +K+ + A A +++ R LTGTP+QN L + + ++ F+ ++
Sbjct: 819 IVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAW 878
Query: 1936 FSNRFENPIMNGQHR 1950
+S + P NG R
Sbjct: 879 WSKLIQKPYENGDPR 893
>At5g19310.1 68418.m02301 homeotic gene regulator, putative similar to
SP|P25439 Homeotic gene regulator (Brahma protein)
{Drosophila melanogaster}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1064
Score = 101 bits (242), Expect = 8e-21
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 6/165 (3%)
Query: 2089 KMLDSLESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYR 2148
K + + +S KF + ++L + G ++L+FS +D LE +L + ++ Y R
Sbjct: 686 KKPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYL-SLNDYM----YLR 740
Query: 2149 LDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDI 2208
LDGS + R ++FN E + +FL+STRAG LGLN+ A+ +II D+ WNP D
Sbjct: 741 LDGSTKTDQRGILLKQFN-EPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQ 799
Query: 2209 QGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVV 2253
Q R +R GQ+K+ ++ V++G++E+ I ER+ K + +V+
Sbjct: 800 QAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVI 844
Score = 80.2 bits (189), Expect = 2e-14
Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 38/296 (12%)
Query: 1750 ILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIK 1809
ILA MGLGKT+Q +AL+ +L + L+ P + + NW +E W ++ +
Sbjct: 408 ILADEMGLGKTIQTIALIAYLLESKDLHGPH-LILAPKAVLPNWENEFALWAPSISAFL- 465
Query: 1810 VFELSKLKKTYERAYQLEDWYSGG--GIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTA 1867
++ SK K+T RA +GG + I Y+L ++D
Sbjct: 466 -YDGSKEKRTEIRAR-----IAGGKFNVLITHYDLIMRDKAFLKKIDW------------ 507
Query: 1868 LLDPGPDIIVCDEGHLLKN-DCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVK 1926
+ ++ DEGH LKN +C++ + +RR++LTGTP+QN+L+E + ++NF+
Sbjct: 508 ------NYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWSLLNFLL 561
Query: 1927 PNLLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPY 1986
P++ + F F P E+ L+ R LH V+ L R++ S + +
Sbjct: 562 PHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINR---LHHVIRPFLLRRKKSEVEKF 618
Query: 1987 LPKKHEYTVFIALTQCQWDLYKHYL------LHYGKQTKNSILKDFHILQKIWSHP 2036
LP K + + ++ Q YK LH G S+ L+K +HP
Sbjct: 619 LPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQNLTMQLRKCCNHP 674
>At3g06010.1 68416.m00686 homeotic gene regulator, putative similar to
SP|P25439 Homeotic gene regulator (Brahma protein)
{Drosophila melanogaster}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1132
Score = 101 bits (242), Expect = 8e-21
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 6/165 (3%)
Query: 2089 KMLDSLESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYR 2148
K + + +S KF + ++L + G ++L+FS +D LE +L + ++ Y R
Sbjct: 734 KKPEIVRASGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLT-LNDYK----YLR 788
Query: 2149 LDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDI 2208
LDG+ + R ++FN E + +FL+STRAG LGLN+ A+ VII D+ WNP D
Sbjct: 789 LDGTTKTDQRGLLLKQFN-EPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQ 847
Query: 2209 QGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVV 2253
Q R +R GQ+K+ ++ V++G++E+ I ER+ K + +V+
Sbjct: 848 QAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVI 892
Score = 83.4 bits (197), Expect = 2e-15
Identities = 80/294 (27%), Positives = 139/294 (47%), Gaps = 33/294 (11%)
Query: 1750 ILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIK 1809
ILA MGLGKT+Q ++L+ +L + GV L+ P + + NWV+E W+ + +
Sbjct: 455 ILADEMGLGKTIQTISLIAYLLENKGVP-GPYLIVAPKAVLPNWVNEFATWVPSIAAFLY 513
Query: 1810 VFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALL 1869
L + K E+ +G G F + ++ D + D + KI +
Sbjct: 514 DGRLEERKAIREKI-------AGEGKFNV------LITHYDLIMRD--KAFLKKIEWYYM 558
Query: 1870 DPGPDIIVCDEGHLLKNDCSVLA-VAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPN 1928
+ DEGH LKN S LA ++ +RR++LTGTP+QN+L+E + ++NF+ P+
Sbjct: 559 -------IVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPH 611
Query: 1929 LLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPYLP 1988
+ + F F P + + E+ L+ H LH V+ + R++ + +LP
Sbjct: 612 IFNSVQNFEEWFNAPFADRGNVSLTDEEELLI---IHRLHHVIRPFILRRKKDEVEKFLP 668
Query: 1989 KKHEYTVFIALTQCQWDLYKHY--LLHYGKQT---KNSILKDFHI-LQKIWSHP 2036
K + + ++ Q YK + G QT K+ L++ + L+K +HP
Sbjct: 669 GKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHP 722
>At2g21450.1 68415.m02552 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|Q61687
Transcriptional regulator ATRX {Mus musculus}; contains
PFam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain
Length = 816
Score = 100 bits (240), Expect = 1e-20
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 17/221 (7%)
Query: 1710 IHPFFTKVMKAHQYEGVKFMWDACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHT 1769
IHP+ + M+ HQ EG +F+ C ++AA +PG GCILAH G GKT +++ L +
Sbjct: 257 IHPWHDQEMRPHQTEGFRFL---C----NNLAADEPG-GCILAHAPGSGKTFLLISFLQS 308
Query: 1770 VLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIKVFELSKLKKTYERAYQLEDW 1829
+ R LV P + +W E W + + + K + ++ L W
Sbjct: 309 FMAMDPQA--RPLVVLPKGIIESWKREFTLWEVEKIPLLDFYSV-KAESRKQQLKVLGQW 365
Query: 1830 YSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDIIVCDEGHLLKNDCS 1889
I +GY+ F + DD + LL+ P +++ DEGH +N +
Sbjct: 366 IKERSILFLGYQQFTRIIC-----DDNFEAASEDCKLILLEK-PTLLILDEGHTSRNKET 419
Query: 1890 VLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLL 1930
+ +++RV TRR++VLTGT QNN+ E F +++ V+P L
Sbjct: 420 YMLSSLARVKTRRKVVLTGTLFQNNVEEVFNILDLVRPKFL 460
Score = 92.7 bits (220), Expect = 4e-18
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 2099 KFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVR 2158
K +L C + G+K+L+FS + + LE + +K W LG + + + G E R
Sbjct: 621 KMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQR 680
Query: 2159 QKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFG 2218
+ FN N+++ K+F S +A G+++ A+RV+ILD NP+ Q + R YR G
Sbjct: 681 EWSMERFN--NSLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPG 738
Query: 2219 QRKDCYIYRFVAMGTMEQKIYERSVTKQAVA 2249
Q++ Y Y+ VA + E++ YE K+ ++
Sbjct: 739 QKRKVYAYKLVAADSPEEENYETCTRKEMMS 769
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 99.5 bits (237), Expect = 3e-20
Identities = 57/182 (31%), Positives = 99/182 (54%), Gaps = 8/182 (4%)
Query: 2094 LESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSV 2153
+ ++ K + ++L + +VLIFS LD LE +L G+ Y R+DG+
Sbjct: 486 ITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMY-----RGYLYCRIDGNT 540
Query: 2154 PPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFR 2213
+ R +N + K +FL+STRAG LG+N+ A+ VI+ D+ WNP D+Q R
Sbjct: 541 GGDERDASIEAYNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR 599
Query: 2214 VYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQI--ERHYNSAELTELY 2271
+R GQ+K+ ++RF +E+K+ ER+ K A+ V+ + ++ ++ N EL ++
Sbjct: 600 AHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMV 659
Query: 2272 RF 2273
R+
Sbjct: 660 RY 661
Score = 92.3 bits (219), Expect = 5e-18
Identities = 82/266 (30%), Positives = 132/266 (49%), Gaps = 35/266 (13%)
Query: 1746 GSGCILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVT 1805
G ILA MGLGKTLQ ++LL + + G+ ++V P ST+ NW++EI ++ PV
Sbjct: 207 GINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVA-PKSTLGNWMNEIRRFC-PVL 264
Query: 1806 NQIKVFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIR 1865
+K L ER + ED G I +++ + + K +
Sbjct: 265 RAVKF-----LGNPEERRHIREDLLVAGKFDIC-------VTSFEMAI---------KEK 303
Query: 1866 TALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFV 1925
TAL I+ DE H +KN+ S+L+ M +T R+++TGTP+QNNL E + ++NF+
Sbjct: 304 TALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 363
Query: 1926 KPNLLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYP 1985
P + + F F+ ++G+ + +QE ++ LHKVL L R+ S +
Sbjct: 364 LPEIFSSAETFDEWFQ---ISGE--NDQQEVVQQ-------LHKVLRPFLLRRLKSDVEK 411
Query: 1986 YLPKKHEYTVFIALTQCQWDLYKHYL 2011
LP K E + + ++Q Q YK L
Sbjct: 412 GLPPKKETILKVGMSQMQKQYYKALL 437
Score = 32.3 bits (70), Expect = 5.8
Identities = 29/158 (18%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 520 DEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPDNQE 579
+E+ + + E+ E + S SDDDE++ +P + + +++E
Sbjct: 16 EEERVKDNEEEDEEELEAVARSSGSDDDEVA---AADESPVSDGEAAPVEDDYEDEEDEE 72
Query: 580 QCNSSNVEP--IKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTT 637
+ S E +K+ + K+ ++ S++ ++D + + + L+ + T
Sbjct: 73 KAEISKREKARLKEMQKLKKQKIQEMLESQNASIDADMNNKGKGRLKYLLQQTELFAHFA 132
Query: 638 YSENKEPSNKSETQVTESQVITLNDEDENIQSYISENE 675
S+ K++ + + IT +EDE Y+ E E
Sbjct: 133 KSDGSSSQKKAKGRGRHASKITEEEEDE---EYLKEEE 167
>At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1072
Score = 99.1 bits (236), Expect = 4e-20
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 8/180 (4%)
Query: 2096 SSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPP 2155
++ K + ++L + +VLIFS LD LE +L G+ Y R+DG+
Sbjct: 493 NAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMY-----RGYQYCRIDGNTGG 547
Query: 2156 EVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVY 2215
+ R +N + K +FL+STRAG LG+N+ A+ VI+ D+ WNP D+Q R +
Sbjct: 548 DERDASIEAYNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH 606
Query: 2216 RFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQI--ERHYNSAELTELYRF 2273
R GQ+K+ ++RF +E K+ ER+ K A+ V+ + ++ ++ N EL ++ R+
Sbjct: 607 RIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRY 666
Score = 88.6 bits (210), Expect = 6e-17
Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 35/266 (13%)
Query: 1746 GSGCILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVT 1805
G ILA MGLGKTLQ ++LL + + G+ ++V P ST+ NW++EI ++ PV
Sbjct: 212 GINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVA-PKSTLGNWMNEIRRFC-PVL 269
Query: 1806 NQIKVFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIR 1865
+K L ER + E+ G I +++ + + K +
Sbjct: 270 RAVKF-----LGNPEERRHIREELLVAGKFDIC-------VTSFEMAI---------KEK 308
Query: 1866 TALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFV 1925
T L I+ DE H +KN+ S+L+ M +T R+++TGTP+QNNL E + ++NF+
Sbjct: 309 TTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 368
Query: 1926 KPNLLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYP 1985
P + + F F+ ++G+ + +QE ++ LHKVL L R+ S +
Sbjct: 369 LPEVFSSAETFDEWFQ---ISGE--NDQQEVVQQ-------LHKVLRPFLLRRLKSDVEK 416
Query: 1986 YLPKKHEYTVFIALTQCQWDLYKHYL 2011
LP K E + + ++Q Q YK L
Sbjct: 417 GLPPKKETILKVGMSQMQKQYYKALL 442
>At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1069
Score = 99.1 bits (236), Expect = 4e-20
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 8/180 (4%)
Query: 2096 SSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPP 2155
++ K + ++L + +VLIFS LD LE +L G+ Y R+DG+
Sbjct: 493 NAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMY-----RGYQYCRIDGNTGG 547
Query: 2156 EVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVY 2215
+ R +N + K +FL+STRAG LG+N+ A+ VI+ D+ WNP D+Q R +
Sbjct: 548 DERDASIEAYNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH 606
Query: 2216 RFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQI--ERHYNSAELTELYRF 2273
R GQ+K+ ++RF +E K+ ER+ K A+ V+ + ++ ++ N EL ++ R+
Sbjct: 607 RIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRY 666
Score = 88.6 bits (210), Expect = 6e-17
Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 35/266 (13%)
Query: 1746 GSGCILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVT 1805
G ILA MGLGKTLQ ++LL + + G+ ++V P ST+ NW++EI ++ PV
Sbjct: 212 GINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVA-PKSTLGNWMNEIRRFC-PVL 269
Query: 1806 NQIKVFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIR 1865
+K L ER + E+ G I +++ + + K +
Sbjct: 270 RAVKF-----LGNPEERRHIREELLVAGKFDIC-------VTSFEMAI---------KEK 308
Query: 1866 TALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFV 1925
T L I+ DE H +KN+ S+L+ M +T R+++TGTP+QNNL E + ++NF+
Sbjct: 309 TTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 368
Query: 1926 KPNLLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYP 1985
P + + F F+ ++G+ + +QE ++ LHKVL L R+ S +
Sbjct: 369 LPEVFSSAETFDEWFQ---ISGE--NDQQEVVQQ-------LHKVLRPFLLRRLKSDVEK 416
Query: 1986 YLPKKHEYTVFIALTQCQWDLYKHYL 2011
LP K E + + ++Q Q YK L
Sbjct: 417 GLPPKKETILKVGMSQMQKQYYKALL 442
>At5g22750.1 68418.m02657 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P36607 DNA repair protein rad8
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 1029
Score = 98.7 bits (235), Expect = 6e-20
Identities = 57/174 (32%), Positives = 100/174 (57%), Gaps = 11/174 (6%)
Query: 2097 SNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPE 2156
S+K A+ + LE + G K ++FS LD L+ L + N+S + RLDG++ +
Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSR-NNFS----FVRLDGTLSQQ 916
Query: 2157 VRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYR 2216
R+K +EF+ + +I + L+S +AG +G+N+TAA+ ++D WNPA + Q + R++R
Sbjct: 917 QREKVLKEFSEDGSIL--VLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHR 974
Query: 2217 FGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHYNSAELTEL 2270
GQ K+ I RF+ GT+E+++ KQ + + +Q++ SA + EL
Sbjct: 975 IGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGALTDQEV----RSARIEEL 1024
Score = 57.6 bits (133), Expect = 1e-07
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 1876 IVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSE 1935
IV DE H +KN S +++A + + RR LTGTP+QNNL + + ++ F++ GT++
Sbjct: 570 IVLDEAHTIKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAW 629
Query: 1936 FSNRFENPIMNGQHR 1950
++ + P G R
Sbjct: 630 WNKLVQKPFEEGDER 644
>At3g57300.1 68416.m06378 transcriptional activator, putative similar
to transcriptional activator SRCAP [Homo sapiens]
GI:5106572; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1507
Score = 98.3 bits (234), Expect = 8e-20
Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 10/167 (5%)
Query: 2082 LQYLDGGKMLDSLESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWS 2141
+Q D K+L S K + +L+ A +VL+F+ L+ LE ++ K
Sbjct: 1193 MQSFDPAKLLTD---SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRK--- 1246
Query: 2142 LGHDYYRLDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTS 2201
+ Y RLDGS R+ R+F ++I +FL+STRAG LG+N+TAA+ VI ++
Sbjct: 1247 --YKYLRLDGSSTIMDRRDMVRDFQHRSDIF--VFLLSTRAGGLGINLTAADTVIFYESD 1302
Query: 2202 WNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAV 2248
WNP D+Q + R +R GQ KD +YR + T+E+KI R+ K V
Sbjct: 1303 WNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTV 1349
Score = 66.9 bits (156), Expect = 2e-10
Identities = 85/343 (24%), Positives = 148/343 (43%), Gaps = 47/343 (13%)
Query: 1675 RLREHLGCEEDVNVMVINDEVCLEYDFEENRPV---VTIHPFFTKVMKAHQYEGVKFMWD 1731
+LR+ E +N + ++ ++ PV V F +K +Q +G++++ +
Sbjct: 540 KLRQTSEMEGPLNDISVSGSSNIDLHNPSTMPVTSTVQTPELFKGTLKEYQMKGLQWLVN 599
Query: 1732 ACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVL 1791
C+E G ILA MGLGKT+Q +A L + + LV P S +
Sbjct: 600 -CYEQ---------GLNGILADEMGLGKTIQAMAFLAHLAEEKNIW-GPFLVVAPASVLN 648
Query: 1792 NWVDEIHKWIGPVTNQIKVF----ELSKLKKTY--ERAYQLEDWYSGGGIFIIGYELFRS 1845
NW DEI ++ P + + E + L+K +R Y+ + +G I I Y+L
Sbjct: 649 NWADEISRFC-PDLKTLPYWGGLQERTILRKNINPKRMYRRD---AGFHILITSYQL--- 701
Query: 1846 LSTLDPELDDIRPTIVNKIRTALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIV 1905
L T + + K + +LD E +K+ S+ + R R++
Sbjct: 702 LVTDEKYFRRV------KWQYMVLD---------EAQAIKSSSSIRWKTLLSFNCRNRLL 746
Query: 1906 LTGTPMQNNLREYFCMVNFVKPNLLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTH 1965
LTGTP+QNN+ E + +++F+ P L + +F+ F I N + +L +
Sbjct: 747 LTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNR---- 802
Query: 1966 ILHKVLEGCLQRQEASVLYPYLPKKHEYTVFIALTQCQWDLYK 2008
LH +L+ + R+ + L K E TV L+ Q Y+
Sbjct: 803 -LHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQ 844
>At2g44980.1 68415.m05600 transcription regulatory protein SNF2,
putative similar to SNF2P [Oryza sativa (japonica
cultivar-group)] GI:23193483; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain; CG donor site annotated in
one isoform based on protein alignments.
Length = 851
Score = 93.5 bits (222), Expect = 2e-18
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 6/177 (3%)
Query: 2094 LESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSV 2153
+++S K + Q+L+ G +VL+FS TLD L+ F+ +++ +S Y RLDGSV
Sbjct: 364 VQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFM-ELRRYS----YERLDGSV 418
Query: 2154 PPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFR 2213
E R + F+ + + +F+ISTRAG +GLN+ AA+ VI + WNP D Q + R
Sbjct: 419 RAEERFAAIKNFSVDGS-NAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 477
Query: 2214 VYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHYNSAELTEL 2270
+R GQ V ++E+ I R+ K ++ VV + E+ + +L L
Sbjct: 478 AHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEEDGGDLRSL 534
Score = 69.7 bits (163), Expect = 3e-11
Identities = 86/302 (28%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 1715 TKVMKAHQYEGVKFMWDACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHTVLTHP 1774
T +K HQ EGV ++ V + + MGLGKTLQ ++ L +
Sbjct: 48 TATLKPHQVEGVSWLIQKYLLGVNVV---------LELDQMGLGKTLQAISFLSYLKFRQ 98
Query: 1775 GVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIKVFELSKLKKTYERAYQLEDWYSGGG 1834
G+ LV CPLS WV EI+++ T ++V L + Y R + Y G
Sbjct: 99 GLP-GPFLVLCPLSVTDGWVSEINRF----TPNLEV--LRYVGDKYCRLDMRKSMYDHG- 150
Query: 1835 IFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDIIVCDEGHLLKNDCSVLA-V 1893
+ +++ L+T D L D +++I P I+ DE LKN SVL V
Sbjct: 151 -HFLPFDVL--LTTYDIALVD--QDFLSQI------PWQYAII-DEAQRLKNPNSVLYNV 198
Query: 1894 AMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEFSNRFENPIMNGQHRDSR 1953
+ + RR+++TGTP+QNNL E + +++F P + GT +F + F+ G D
Sbjct: 199 LLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKE---TGDGLDVS 255
Query: 1954 QEDIRLMKARTHILHKVLEGCLQRQEASVLYP----YLPKKHEYTVFIALTQCQWDLYKH 2009
+ K L +L + R+ S+L LP E TV + L Q +Y
Sbjct: 256 ND-----KETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTS 310
Query: 2010 YL 2011
L
Sbjct: 311 IL 312
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385: 'chromo'
(CHRromatin Organization MOdifier)
Length = 2228
Score = 89.4 bits (212), Expect = 4e-17
Identities = 87/299 (29%), Positives = 147/299 (49%), Gaps = 36/299 (12%)
Query: 1750 ILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIK 1809
ILA MGLGKT+ A L ++ GV + LV PLST+ NW+ E W P+ N ++
Sbjct: 697 ILADEMGLGKTVSASAFLSSLYFEFGVA-RPCLVLVPLSTMPNWLSEFSLW-APLLNVVE 754
Query: 1810 VFELSKLKKTYERAYQLEDWYSGGGIFI-IGYELFRSLSTLDPELDDIRPTIVNKIRTAL 1868
+K + R Y+ S G Y+ L+T + L D + L
Sbjct: 755 YHGSAK-GRAIIRDYEWHAKNSTGTTKKPTSYKFNVLLTTYEMVLAD---------SSHL 804
Query: 1869 LDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPN 1928
+++V DEGH LKN S L ++ + + R++LTGTP+QNN+ E + ++NF++P+
Sbjct: 805 RGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPS 864
Query: 1929 LLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPYLP 1988
+ S F RF + + + + + E+++ + A H+L ++ + +Q +P
Sbjct: 865 SFPSLSSFEERFHD-LTSAE----KVEELKKLVA-PHMLRRLKKDAMQN---------IP 909
Query: 1989 KKHEYTVFIALTQCQWDLY-----KHY--LLHYGK-QTKNSILKDFHILQKIWSHPQVL 2039
K E V + LT Q + Y K+Y L + GK + S+L L+K+ +HP ++
Sbjct: 910 PKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 968
Score = 87.4 bits (207), Expect = 1e-16
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 2094 LESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLG-HDYYRLDGS 2152
+++S K + +L+ G +VLIFS LD LE +L N G + R+DGS
Sbjct: 986 IKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYL----NIEFGPKTFERVDGS 1041
Query: 2153 VPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIF 2212
V RQ FN + N +FL+STRA LG+N+ A+ VII D+ +NP DIQ +
Sbjct: 1042 VAVADRQAAIARFNQDKN--RFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMN 1099
Query: 2213 RVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTK 2245
R +R GQ K +YR V ++E++I + + K
Sbjct: 1100 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1132
>At5g20420.1 68418.m02428 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|Q9U7E0
Transcriptional regulator ATRX homolog {Caenorhabditis
elegans}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1261
Score = 89.4 bits (212), Expect = 4e-17
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 2/169 (1%)
Query: 2088 GKMLDSLESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYY 2147
GK+ + +K V ++ +K+LIF ++ + I W G +
Sbjct: 1053 GKLKHDAKKGSKVMFVLNLIFRVVKR-EKILIFCHNIAPIRMFTELFENIFRWQRGREIL 1111
Query: 2148 RLDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHD 2207
L G + R + +F N +++ L S A + G+++TAA+RVI+LD+ WNP+
Sbjct: 1112 TLTGDLELFERGRVIDKFEEPGN-PSRVLLASITACAEGISLTAASRVIMLDSEWNPSKT 1170
Query: 2208 IQGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQ 2256
Q I R +R GQ+K Y+Y+ ++ GT+E+ Y R+ K+ V+C + E+
Sbjct: 1171 KQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSCMIFSEE 1219
Score = 83.0 bits (196), Expect = 3e-15
Identities = 70/254 (27%), Positives = 112/254 (44%), Gaps = 35/254 (13%)
Query: 1702 EENRPVVTIHPFFTKVMKAHQYEGVKFMWDACFESVEHI----AAGKPGSGCILAHCMGL 1757
EE+ V + P + + HQ +F+W SVE +G G GC+++H G
Sbjct: 663 EESDNVWALIPKLKRKLHVHQRRAFEFLWRNVAGSVEPSLMDPTSGNIG-GCVISHSPGA 721
Query: 1758 GKTLQVLALLHTVLT-HPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVT----------- 1805
GKT ++A L + L PG +R LV P +T+ W E KW PV
Sbjct: 722 GKTFLIIAFLTSYLKLFPG---KRPLVLAPKTTLYTWYKEFIKWEIPVPVHLIHGRRTYC 778
Query: 1806 --NQIKVFELSKLKK-------TYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDI 1856
Q K + + + K + +++ W++ + ++GY F +L D +
Sbjct: 779 TFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFTTLMREDSKFAH- 837
Query: 1857 RPTIVNKIRTALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLR 1916
K +L P ++V DEGH ++ S L A+ +V T RI+L+GT QNN
Sbjct: 838 -----RKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTLFQNNFC 892
Query: 1917 EYFCMVNFVKPNLL 1930
EYF + +P +
Sbjct: 893 EYFNTLCLARPKFI 906
>At2g44980.2 68415.m05601 transcription regulatory protein SNF2,
putative similar to SNF2P [Oryza sativa (japonica
cultivar-group)] GI:23193483; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain; CG donor site annotated in
one isoform based on protein alignments.
Length = 870
Score = 88.2 bits (209), Expect = 8e-17
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 2094 LESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSV 2153
+++S K + Q+L+ G +VL+FS TLD L+ F+ +++ +S Y RLDGSV
Sbjct: 373 VQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFM-ELRRYS----YERLDGSV 427
Query: 2154 PPEVRQKWCREFNA--ENNIKTKL-------FLISTRAGSLGLNMTAANRVIILDTSWNP 2204
E R + F+A E + +++ F+ISTRAG +GLN+ AA+ VI + WNP
Sbjct: 428 RAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNP 487
Query: 2205 AHDIQGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHYNS 2264
D Q + R +R GQ V ++E+ I R+ K ++ VV + E+ +
Sbjct: 488 QVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEEDG 547
Query: 2265 AELTEL 2270
+L L
Sbjct: 548 GDLRSL 553
Score = 67.7 bits (158), Expect = 1e-10
Identities = 87/306 (28%), Positives = 132/306 (43%), Gaps = 41/306 (13%)
Query: 1715 TKVMKAHQYEGVKFMWDACFESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHTVLTHP 1774
T +K HQ EGV ++ V + + MGLGKTLQ ++ L +
Sbjct: 48 TATLKPHQVEGVSWLIQKYLLGVNVV---------LELDQMGLGKTLQAISFLSYLKFRQ 98
Query: 1775 GVGIQRVLVCCPLSTVLNWVDEIHKWIG--PVTNQI--KVFELSKLKKTYERAYQLEDWY 1830
G+ LV CPLS WV EI+++ V + K L K Y+ +
Sbjct: 99 GLP-GPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKK----- 152
Query: 1831 SGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDIIVCDEGHLLKNDCSV 1890
S G F+ +++ L+T D L D +++I P I+ DE LKN SV
Sbjct: 153 SSKGHFL-PFDVL--LTTYDIALVD--QDFLSQI------PWQYAII-DEAQRLKNPNSV 200
Query: 1891 LA-VAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEFSNRFENPIMNGQH 1949
L V + + RR+++TGTP+QNNL E + +++F P + GT +F + F+ G
Sbjct: 201 LYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKE---TGDG 257
Query: 1950 RDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYP----YLPKKHEYTVFIALTQCQWD 2005
D+ K L +L + R+ S+L LP E TV + L Q
Sbjct: 258 LSGL--DVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKK 315
Query: 2006 LYKHYL 2011
+Y L
Sbjct: 316 IYTSIL 321
>At2g28290.2 68415.m03434 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3529
Score = 87.4 bits (207), Expect = 1e-16
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 2099 KFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVR 2158
K + ++L + A +VL FST LD +E +L +K G+ Y RLDG R
Sbjct: 1074 KLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLT-LK----GYKYLRLDGQTSGGDR 1128
Query: 2159 QKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFG 2218
FN + +FL+S RAG +G+N+ AA+ VI+ DT WNP D+Q R +R G
Sbjct: 1129 GALIDGFNKSGS-PFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIG 1187
Query: 2219 QRKDCYIYRFVAMGTMEQKIYERSVTKQAVA 2249
Q+KD + RF + ++E+++ + K VA
Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKLGVA 1218
Score = 76.2 bits (179), Expect = 4e-13
Identities = 74/278 (26%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 1750 ILAHCMGLGKTLQVLALL-HTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQI 1808
ILA MGLGKT+QV++L+ + + T G LV P S + W EI+ W + +
Sbjct: 776 ILADEMGLGKTVQVISLICYLMETKNDRG--PFLVVVPSSVLPGWQSEINFWAPSIHKIV 833
Query: 1809 KVFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTAL 1868
+ +K ++ + + + + YE + RP + +KI
Sbjct: 834 YCGTPDERRKLFKEQIVHQKF----NVLLTTYEYLMNKHD--------RPKL-SKIHW-- 878
Query: 1869 LDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPN 1928
I+ DEGH +KN L + + R++LTGTP+QNNL E + ++NF+ PN
Sbjct: 879 -----HYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPN 933
Query: 1929 LLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHI----LHKVLEGCLQRQEASVLY 1984
+ + +FS F P + + +S E+ L + + LH+VL + R+ +
Sbjct: 934 IFNSSEDFSQWFNKPFQS--NGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVE 991
Query: 1985 PYLPKKHEYTVFIALTQCQWDLYKHYLLHYGKQTKNSI 2022
LP+K E L +C+ Y+ L+ + SI
Sbjct: 992 NELPEKIE-----RLIRCEASAYQKLLMKRVEDNLGSI 1024
>At2g28290.1 68415.m03433 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3574
Score = 87.4 bits (207), Expect = 1e-16
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 2099 KFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVR 2158
K + ++L + A +VL FST LD +E +L +K G+ Y RLDG R
Sbjct: 1074 KLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLT-LK----GYKYLRLDGQTSGGDR 1128
Query: 2159 QKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFG 2218
FN + +FL+S RAG +G+N+ AA+ VI+ DT WNP D+Q R +R G
Sbjct: 1129 GALIDGFNKSGS-PFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIG 1187
Query: 2219 QRKDCYIYRFVAMGTMEQKIYERSVTKQAVA 2249
Q+KD + RF + ++E+++ + K VA
Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKLGVA 1218
Score = 76.2 bits (179), Expect = 4e-13
Identities = 74/278 (26%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 1750 ILAHCMGLGKTLQVLALL-HTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQI 1808
ILA MGLGKT+QV++L+ + + T G LV P S + W EI+ W + +
Sbjct: 776 ILADEMGLGKTVQVISLICYLMETKNDRG--PFLVVVPSSVLPGWQSEINFWAPSIHKIV 833
Query: 1809 KVFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTAL 1868
+ +K ++ + + + + YE + RP + +KI
Sbjct: 834 YCGTPDERRKLFKEQIVHQKF----NVLLTTYEYLMNKHD--------RPKL-SKIHW-- 878
Query: 1869 LDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPN 1928
I+ DEGH +KN L + + R++LTGTP+QNNL E + ++NF+ PN
Sbjct: 879 -----HYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPN 933
Query: 1929 LLGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKARTHI----LHKVLEGCLQRQEASVLY 1984
+ + +FS F P + + +S E+ L + + LH+VL + R+ +
Sbjct: 934 IFNSSEDFSQWFNKPFQS--NGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVE 991
Query: 1985 PYLPKKHEYTVFIALTQCQWDLYKHYLLHYGKQTKNSI 2022
LP+K E L +C+ Y+ L+ + SI
Sbjct: 992 NELPEKIE-----RLIRCEASAYQKLLMKRVEDNLGSI 1024
>At3g42670.1 68416.m04437 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|P41410 DNA
repair protein rhp54 (RAD54 homolog) {Schizosaccharomyces
pombe}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1256
Score = 84.2 bits (199), Expect = 1e-15
Identities = 44/145 (30%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 2115 DKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFNAENNIKTK 2174
+K+LIF ++ + + W G + L G + R + +F E +++
Sbjct: 1073 EKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGRVIDKFE-EPGGQSR 1131
Query: 2175 LFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGTM 2234
+ L S A + G+++TAA+RVI+LD+ WNP+ Q I R +R GQ+K Y+Y+ ++ GT+
Sbjct: 1132 VLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTL 1191
Query: 2235 EQKIYERSVTKQAVACRVVDEQQIE 2259
E+ Y R+ K+ V+ + E+ +E
Sbjct: 1192 EEDKYRRTTWKEWVSSMIFSEEFVE 1216
Score = 81.0 bits (191), Expect = 1e-14
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 46/284 (16%)
Query: 1683 EEDVNVMVINDEVCLEYDF------------EENRPVVTIHPFFTKVMKAHQYEGVKFMW 1730
E+D+N ++N + + F EE+ V ++ P + + HQ + +F+W
Sbjct: 627 EDDINTTIVNQDGVESHTFTIPVASSDMPSAEESDNVWSLIPQLKRKLHLHQKKAFEFLW 686
Query: 1731 DACFESVEHIAAGKPGS----GCILAHCMGLGKTLQVLALLHTVLT-HPGVGIQRVLVCC 1785
SV A P S GC+++H G GKT ++A L + L PG +R LV
Sbjct: 687 KNLAGSVVP-AMMDPSSDKIGGCVVSHTPGAGKTFLIIAFLASYLKIFPG---KRPLVLA 742
Query: 1786 PLSTVLNWVDEIHKWIGPVTNQI------------KVFELSKLKKTYERAYQLED----- 1828
P +T+ W E KW PV + K + + K + + D
Sbjct: 743 PKTTLYTWYKEFIKWEIPVPVHLLHGRRTYCMSKEKTIQFEGIPKPSQDVMHVLDCLDKI 802
Query: 1829 --WYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDIIVCDEGHLLKN 1886
W++ + ++GY F +L D + K +L P ++V DEGH ++
Sbjct: 803 QKWHAQPSVLVMGYTSFLTLMREDSKFAH------RKYMAKVLRESPGLLVLDEGHNPRS 856
Query: 1887 DCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLL 1930
S L A+ +V T RI+L+GT QNN EYF + +P +
Sbjct: 857 TKSRLRKALMKVDTDLRILLSGTLFQNNFCEYFNTLCLARPKFV 900
>At3g24340.1 68416.m03056 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|P41410 DNA repair
protein rhp54 (RAD54 homolog) {Schizosaccharomyces
pombe}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1132
Score = 78.6 bits (185), Expect = 7e-14
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 28/277 (10%)
Query: 1712 PFFTKVMKAHQYEGVKFMWD--ACFESVEHI-AAGKPGSG-CILAHCMGLGKTLQVLALL 1767
P + HQ EG +F+W A + + + G GSG CI++H G GKT + L
Sbjct: 571 PGIKDTLYPHQQEGFEFIWKNLAGTTKINELNSVGVKGSGGCIISHKAGTGKTRLTVVFL 630
Query: 1768 HTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIG--PVTN----QIKVFE----LSKLK 1817
+ L +V P + + W DE+ KW P N Q+ +E +S+L+
Sbjct: 631 QSYLKR--FPNSHPMVIAPATLMRTWEDEVRKWNVNIPFYNMNSLQLSGYEDAEAVSRLE 688
Query: 1818 KTYE----RAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALLDPGP 1873
R +L W+ I I Y L+ L+ + T ++ +L P
Sbjct: 689 GNRHHNSIRMVKLVSWWKQKSILGISYPLYEKLAAN-------KNTEGMQVFRRMLVELP 741
Query: 1874 DIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTY 1933
++V DEGH +N S++ ++ V T +RI L+GT QNN +E ++ +P T
Sbjct: 742 GLLVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVLCLARPADKDTI 801
Query: 1934 SEFSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKV 1970
S + G+H +E+ R++ + I H V
Sbjct: 802 SSRIHELSKCSQEGEHGRVNEEN-RIVDLKAMIAHFV 837
Score = 77.8 bits (183), Expect = 1e-13
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 2115 DKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFNAENNIKTK 2174
+KVL++S + TL + L +W+ G + G V RQ FN ++ +K
Sbjct: 944 EKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDS-GSK 1002
Query: 2175 LFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGTM 2234
+ L ST+A S G+++ A+RV+ILD WNP+ + Q I R +R GQ++ +IY + T
Sbjct: 1003 VLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTS 1062
Query: 2235 EQKIYERSVTKQAVA 2249
E Y + K ++
Sbjct: 1063 EWNKYCKQSEKHRIS 1077
>At3g20010.1 68416.m02531 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to transcription factor RUSH-1alpha
[Oryctolagus cuniculus] GI:1655930; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 1047
Score = 78.6 bits (185), Expect = 7e-14
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 2116 KVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFNAENNIKTKL 2175
K +IFS LD +E LR +++ G ++ RLDG++ R + +EF+ + ++K +
Sbjct: 894 KTIIFSQWTGMLDLVE--LRILES---GIEFRRLDGTMSLAARDRAVKEFSKKPDVK--V 946
Query: 2176 FLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGTME 2235
L+S +AG+LGLNM AA VI+LD WNP + Q I R +R GQ + + R T+E
Sbjct: 947 MLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVE 1006
Query: 2236 QKIYERSVTKQAVACRVVDEQ 2256
+I + K+ + E+
Sbjct: 1007 DRILKLQEEKRTMVASAFGEE 1027
Score = 40.7 bits (91), Expect = 0.017
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 1876 IVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSE 1935
IV DE +KN + +A + + +RR L+GTP+QN + + + F++ + Y
Sbjct: 545 IVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLRYDPYAVYKS 604
Query: 1936 FSNRFENPI 1944
F + + PI
Sbjct: 605 FYSTIKVPI 613
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 77.8 bits (183), Expect = 1e-13
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 2114 GDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFNAENNIKT 2173
G+K ++F+ LD LE L+ S G Y R DG + R ++FN ++
Sbjct: 1071 GEKAIVFTQWTKMLDLLEAGLK-----SSGIQYRRFDGKMTVPARDAAVQDFNTLPDVS- 1124
Query: 2174 KLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGT 2233
+ ++S +A SLGLNM AA VI+LD WNP + Q I R +R GQ + + RF T
Sbjct: 1125 -VMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDT 1183
Query: 2234 MEQKIYERSVTKQAVACRVVDEQQ---IERHYNSAELTELY 2271
+E +I K+ + E + E H + +L L+
Sbjct: 1184 VEDRILALQQKKRKMVASAFGEHENGSRESHLSVEDLNYLF 1224
Score = 50.0 bits (114), Expect = 3e-05
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 1782 LVCCPLSTVLNWVDEIHKWIGPVTNQIKVFELSKLKKTYERAYQLEDWYSGGGIFIIGYE 1841
L+ CP S + W DE+ K + + + V +T + ++L + + I Y
Sbjct: 636 LIVCPTSLMRQWADELRKKV-TLEAHLSVLVYHGCSRTKD-PHELAKY----DVVITTYS 689
Query: 1842 LFRSLSTLDPELDDIRPTIVNKIRTALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATR 1901
L +D E P V + L +V DE +KN + ++A S + +
Sbjct: 690 LVSKRKHMDCE-----P--VEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAK 742
Query: 1902 RRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSEFSNRFENPI 1944
RR L+GTP+QN++ + + F+K + +Y F +NPI
Sbjct: 743 RRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCETIKNPI 785
>At2g46020.1 68415.m05724 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2192
Score = 76.6 bits (180), Expect = 3e-13
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 27/261 (10%)
Query: 1750 ILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVTNQIK 1809
ILA MGLGKT+QV+AL+ ++ G L+ P + ++NW E+H W+ V+
Sbjct: 1003 ILADEMGLGKTVQVMALIAYLMEFKG-NYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYY 1061
Query: 1810 VFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNKIRTALL 1869
V + K + + + +E F L T + R+ L
Sbjct: 1062 VGTKDQRSKLFSQ---------------VKFEKFNVLVTTYE--------FIMYDRSKLS 1098
Query: 1870 DPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNL 1929
I+ DE +K+ SVLA + R +RR++LTGTP+QN+L+E + ++N + P++
Sbjct: 1099 KVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDV 1158
Query: 1930 LGTYSEFSNRFENPIMNGQHRDSRQEDIRLMKART---HILHKVLEGCLQRQEASVLYPY 1986
F + F P + ++D + + H LH++LE + R+ +
Sbjct: 1159 FDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGS 1218
Query: 1987 LPKKHEYTVFIALTQCQWDLY 2007
LP K + ++ Q +Y
Sbjct: 1219 LPAKVSVVLRCRMSAIQSAVY 1239
Score = 64.9 bits (151), Expect = 9e-10
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
Query: 2094 LESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSV 2153
+ S K + +IL + G +VL+FST LD LE +L+ W Y R+DG+
Sbjct: 1303 VRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQ----WRR-LVYRRIDGTT 1357
Query: 2154 PPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFR 2213
E R+ +FN + + +FL+S RA GLN+ A+ V+I D NP ++ Q + R
Sbjct: 1358 SLEDRESAIVDFN-DPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVAR 1416
Query: 2214 VYRFGQRKD 2222
+R GQ ++
Sbjct: 1417 AHRIGQTRE 1425
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 1287
Score = 74.9 bits (176), Expect = 8e-13
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 2114 GDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFNAENNIKT 2173
G+K ++FS L+ LE L S Y RLDG++ R K ++FN +
Sbjct: 1130 GEKAIVFSQWTKMLNLLEASLV-----SSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT- 1183
Query: 2174 KLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGT 2233
+ ++S +A SLGLNM AA V++LD WNP + Q I R +R GQ + + RF T
Sbjct: 1184 -VMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDT 1242
Query: 2234 MEQKIYERSVTKQAVACRVVDEQQ---IERHYNSAELTELYRFD 2274
+E +I K+ + E + + H +L+ L+ D
Sbjct: 1243 VEDRILALQQKKRMMVASAFGEDEKGSRQSHLTVEDLSYLFMAD 1286
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 1876 IVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSE 1935
+V DE +KN + +A A + +RR L+GTP+QN++ + + F+K + +Y
Sbjct: 797 VVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVL 856
Query: 1936 FSNRFENPI 1944
F + +NPI
Sbjct: 857 FCSTIKNPI 865
>At1g48310.1 68414.m05396 SNF2 domain-containing protein / helicase
domain-containing protein contains similarity to
DNA-dependent ATPase A GI:6651385 from [Bos taurus]};
contains PFam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2
Length = 673
Score = 74.9 bits (176), Expect = 8e-13
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 2043 QTKARDEKAKIKAEKLEDDLAHEDITSEDIKPAETEVWWLQYLDGGKMLDSLESSNKFAA 2102
Q A + K+ K++D ++ +DI S +K E + Y D K A
Sbjct: 423 QINALFHELKVVKSKIKDCISEDDIKS--LKFIEKNLINKIYTDSAVA--------KIPA 472
Query: 2103 VFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWC 2162
V LE G K L+F+ L+ L FL+K K + R+DGS P RQ
Sbjct: 473 VLDYLENVIEAGCKFLVFAHHQSMLEELHQFLKKKKVGCI-----RIDGSTPASSRQALV 527
Query: 2163 REFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKD 2222
+F ++ IK + +S RA +G+ +TAA+ VI + SW P IQ R +R GQ
Sbjct: 528 SDFQDKDEIKAAV--LSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS 585
Query: 2223 CYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQ 2257
I+ +A T++ I++ +K +++D Q+
Sbjct: 586 VNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDGQE 620
Score = 50.4 bits (115), Expect = 2e-05
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 24/236 (10%)
Query: 1735 ESVEHIAAGKPGSGCILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWV 1794
E +E I + G +LA MGLGKTLQ +A+ V VL+ P S L+W
Sbjct: 178 EGIEFIL--QHGGRVLLADEMGLGKTLQAIAVTTCVQES-----WPVLIIAPSSLRLHWA 230
Query: 1795 DEIHKWIGPVTNQIKVFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELD 1854
IH+W+ + I V L + + + + + + G I + G +F +S
Sbjct: 231 TMIHQWLHVPPSDI-VVVLPQPGGSNKCGFTIVSSNTKGTIHLDG--VFNIVSY------ 281
Query: 1855 DIRPTIVNKIRTALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRR--IVLTGTPMQ 1912
+V K+ L+ +++ DE H LKN + A V + + I+L+GTP
Sbjct: 282 ----DVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPAL 337
Query: 1913 NNLREYFCMVNFVKPNLLGTYSEFSNRFENPIMNGQHRDSRQED--IRLMKARTHI 1966
+ E F + + P++ E+ R+ G ++ + D LMKA I
Sbjct: 338 SRPIELFKQLEALYPDVYRNIHEYGGRYCKGGFFGTYQGASNHDELHNLMKATVMI 393
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to transcription factor RUSH-1alpha
[Oryctolagus cuniculus] GI:1655930; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 981
Score = 73.7 bits (173), Expect = 2e-12
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 2116 KVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFNAENNIKTKL 2175
K +IFS LD +E L I+N ++ RLDG++ R + +EF+ N+ K+
Sbjct: 828 KTIIFSQWTGMLDLVELSL--IEN---SIEFRRLDGTMSLIARDRAVKEFS--NDPDVKV 880
Query: 2176 FLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGTME 2235
++S +AG+LGLNM AA VI+LD WNP + Q I R +R GQ + + R T+E
Sbjct: 881 MIMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVE 940
Query: 2236 QKIYERSVTKQAVACRVVDE 2255
+I K+ + E
Sbjct: 941 DRILALQEEKRKMVASAFGE 960
Score = 45.2 bits (102), Expect = 8e-04
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 1876 IVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSE 1935
+V DE +KN + +A A + +RR L+GTP+QN + + + F+K + Y
Sbjct: 474 VVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKS 533
Query: 1936 FSNRFENPI 1944
F ++ + PI
Sbjct: 534 FCHQIKGPI 542
>At5g05130.1 68418.m00544 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to transcription factor RUSH-1alpha
[Oryctolagus cuniculus] GI:1655930; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 862
Score = 70.1 bits (164), Expect = 2e-11
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Query: 2143 GHDYYRLDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSW 2202
G RLDG++ + R + EF + L S +A G+N+TAA+RV + D W
Sbjct: 730 GFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWW 789
Query: 2203 NPAHDIQGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQ--IER 2260
NPA + Q + R++R GQ+++ + R +A ++E+++ E K+ +A +Q ER
Sbjct: 790 NPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDER 849
Query: 2261 HYNSAELTEL 2270
N ++ L
Sbjct: 850 EVNVEDVVAL 859
Score = 38.7 bits (86), Expect = 0.067
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 1876 IVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSE 1935
I+ DE H +KN + + + ++ RR +TGTP+QN + + ++ F++ S
Sbjct: 415 IILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSY 474
Query: 1936 FSNRFENPIMNGQHR 1950
+ + + P+ G +
Sbjct: 475 WQSLIQRPLGQGNKK 489
>At1g05120.1 68414.m00514 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P79051 DNA repair protein rhp16
(RAD16 homolog) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 833
Score = 70.1 bits (164), Expect = 2e-11
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 2091 LDSLESSNKFAAVFQILEECTALGD--KVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYR 2148
LD ++S K A+ + + K ++FS LD + Y L K G +
Sbjct: 655 LDDFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYTLGKC-----GVSCVQ 709
Query: 2149 LDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDI 2208
L GS+ R +F + + + +FL+S +AG + LN+T A+ V ++D WNPA +
Sbjct: 710 LVGSMTMAARDTAINKFKEDPDCR--VFLMSLKAGGVALNLTVASHVFMMDPWWNPAVER 767
Query: 2209 QGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAV 2248
Q R++R GQ K + RF+ T+E++I K+ V
Sbjct: 768 QAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQKKKELV 807
Score = 41.9 bits (94), Expect = 0.007
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 1747 SGCILAHCMGLGKTLQVLALL----HTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIG 1802
+G ILA MG+GKT+Q ++L+ G LV CPL V W++EI ++
Sbjct: 158 AGGILADEMGMGKTIQAISLVLARREVDRAQFGEAAGCTLVLCPLVAVSQWLNEIARFTS 217
Query: 1803 PVTNQIKVFELSKLKK 1818
P + ++ V+ +K K
Sbjct: 218 PGSTKVLVYHGAKRAK 233
Score = 37.1 bits (82), Expect = 0.21
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 1876 IVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVK 1926
I+ DE H +K S A A+ + R L+GTP+QN + E + ++ F++
Sbjct: 357 IILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQ 407
>At1g02670.1 68414.m00217 DNA repair protein, putative similar to
SP|P79051 DNA repair protein rhp16 (RAD16 homolog)
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 678
Score = 67.7 bits (158), Expect = 1e-10
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 2091 LDSLESSNKFAAV-----FQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHD 2145
LD ++S K A+ F + + +A K ++FS LD + Y L K G
Sbjct: 500 LDDFKTSTKIEALREEIRFMVERDWSA---KAIVFSQFTSFLDLISYALGKS-----GVS 551
Query: 2146 YYRLDGSVPPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPA 2205
+L GS+ + + F E + + + L+S +AG + LN+TAA+ V ++D WNPA
Sbjct: 552 CVQLVGSMSKAAKDAALKNFKEEPDCR--VLLMSLQAGGVALNLTAASHVFMMDPWWNPA 609
Query: 2206 HDIQGIFRVYRFGQRKDCYIYRFVAMGTMEQKI 2238
+ Q R++R GQ K + RF+ T+E+KI
Sbjct: 610 VERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKI 642
Score = 52.0 bits (119), Expect = 7e-06
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 20/197 (10%)
Query: 1748 GCILAHCMGLGKTLQVLALL----HTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGP 1803
G ILA MG+GKT+Q ++L+ + LV P + W+DEI + P
Sbjct: 155 GGILADEMGMGKTIQAISLVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSP 214
Query: 1804 VTNQIKVFELSKLKKTYERAYQLEDWYSGGGIFIIGYELFRSLSTLDPELDDIRPTIVNK 1863
+ ++ + K K ++ ++ Y+ + S + E + + V++
Sbjct: 215 GSTRVLQYHGPKRDKNVQK--------------LMNYDFVLTTSPI-VENEYRKDEGVDE 259
Query: 1864 IRTALLDPGPDIIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVN 1923
+ L + I+ DE H +KN S A A+ + R L+GTP+QN++ E + +V+
Sbjct: 260 TMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSLVS 319
Query: 1924 FVKPNLL-GTYSEFSNR 1939
+ N TY+ F+ R
Sbjct: 320 YSFLNFFYSTYASFAFR 336
>At3g16600.1 68416.m02122 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P31244 DNA repair protein RAD16
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 638
Score = 65.7 bits (153), Expect = 5e-10
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 2150 DGSVPPEVRQKWCREFNAENNIKTKL--FLISTRAGSLGLNMTAANRVIILDTSWNPAHD 2207
D SV RQ N +N+I + L+S +AG+LGLNM AA+ VI+LD WNP +
Sbjct: 483 DSSVACRARQSR-HSTNKDNSISGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTE 541
Query: 2208 IQGIFRVYRFGQRKDCYIYRFVAMGTMEQKIYERSVTKQAVACRVVDEQQIERHYNS 2264
Q I R +R GQ + + R T+E++I K+ + + E+ ++ +S
Sbjct: 542 DQAIDRAHRIGQTRAVTVTRIAIKNTVEERILTLHERKRNIVASALGEKNWQKFCDS 598
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 1876 IVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSE 1935
+V DE H +KN +++A A + +RR LTGTP++N + + + F++ + +
Sbjct: 216 VVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNS 275
Query: 1936 FSNRFENPI 1944
F R + PI
Sbjct: 276 FHQRIKAPI 284
>At2g46020.2 68415.m05725 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2193
Score = 64.9 bits (151), Expect = 9e-10
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
Query: 2094 LESSNKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSV 2153
+ S K + +IL + G +VL+FST LD LE +L+ W Y R+DG+
Sbjct: 1304 VRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQ----WRR-LVYRRIDGTT 1358
Query: 2154 PPEVRQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFR 2213
E R+ +FN + + +FL+S RA GLN+ A+ V+I D NP ++ Q + R
Sbjct: 1359 SLEDRESAIVDFN-DPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVAR 1417
Query: 2214 VYRFGQRKD 2222
+R GQ ++
Sbjct: 1418 AHRIGQTRE 1426
Score = 61.7 bits (143), Expect = 8e-09
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 1876 IVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLLGTYSE 1935
I+ DE +K+ SVLA + R +RR++LTGTP+QN+L+E + ++N + P++
Sbjct: 1106 IIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKA 1165
Query: 1936 FSNRFENPIMNGQHRDSRQEDIRLMKART---HILHKVLEGCLQRQEASVLYPYLPKKHE 1992
F + F P + ++D + + H LH++LE + R+ + LP K
Sbjct: 1166 FHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVS 1225
Query: 1993 YTVFIALTQCQWDLY 2007
+ ++ Q +Y
Sbjct: 1226 VVLRCRMSAIQSAVY 1240
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 1750 ILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWIGPVT 1805
ILA MGLGKT+QV+AL+ ++ G L+ P + ++NW E+H W+ V+
Sbjct: 1003 ILADEMGLGKTVQVMALIAYLMEFKG-NYGPHLIIVPNAVLVNWKSELHTWLPSVS 1057
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe}; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00628:
PHD-finger, PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 1648
Score = 58.8 bits (136), Expect = 6e-08
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 2168 ENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYR 2227
E +I+ L L+ + G+ GLN+ A VI+++ NPA + Q + RV+R GQ K ++R
Sbjct: 1493 EKSIQVLLLLV--QHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHR 1550
Query: 2228 FVAMGTMEQKIYERSVTK 2245
F+ GT+E+ IY+ + K
Sbjct: 1551 FLVSGTVEESIYKLNRNK 1568
Score = 37.1 bits (82), Expect = 0.21
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 1876 IVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPN 1928
I DE +++++ + R+ T+ R +TGTP+Q L + F ++ F+K N
Sbjct: 587 ICLDEAQMVESNAAAATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKAN 639
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 50.0 bits (114), Expect = 3e-05
Identities = 103/603 (17%), Positives = 224/603 (37%), Gaps = 30/603 (4%)
Query: 140 NKSNQQITESENVICDKNRSVIVGKKRGRKPKQKIMGTRKPSSPPQTYLQEDILSTNMLS 199
+K N++ +EN + +K +V KK K ++ G +K S ++ +D N
Sbjct: 755 SKENKKTKTNENRVRNKEENVQGNKKESEKVEK---GEKKESKDAKSVETKD----NKKL 807
Query: 200 NQTEDEESLEINKNHHNRPSKDKIFETNQTTTSEADSTNNIEMSAECTNSSNDLK----M 255
+ TE+ + + N+ K++ + E + ++ + S DLK +
Sbjct: 808 SSTENRDEAKERSGEDNKEDKEESKDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDRSV 867
Query: 256 KICPKAKEKIFPSHSYKDLTTQLSNQDIRNQHNSSKVELIXXXXXXXXXXXXXXTHDDKI 315
++ +E + + S +++R+ N+ +++ +K
Sbjct: 868 EVKANKEESMKKKREEVQRNDKSSTKEVRDFANNMDIDVQKGSGESVKYKKDEKKEGNKE 927
Query: 316 VN--TTTNVDKNQSEVIIDDLPILHNTMLKKSITGSDDKF--ELQSSDEPEAPVIKSQII 371
N T K + + N+ +KK + EL+ ++ + KS+
Sbjct: 928 ENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENS 987
Query: 372 TLNDEDVNMSENERKKSHLNSVTENQDSDGDDEISLLSLKSFAAQQLLENRDILSPINKP 431
L +E+ +N+ KK +S ++N++ +E K A ++ +++D K
Sbjct: 988 KLKEEN---KDNKEKKESEDSASKNREKKEYEE-KKSKTKEEAKKEKKKSQDKKRE-EKD 1042
Query: 432 DDQEQSNSTKVDT----IKKKRGRPKKIYENKMINKSLNVDKNQSEATNHVLLIAQNSTV 487
++ +S K ++ KKK K+ E++ DK + E +
Sbjct: 1043 SEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEK 1102
Query: 488 LKTPIISEDNLEFKSSDIVKSQVLLPPIITLNDEDEISTDIEQKNCSKETITESQISDDD 547
K E D+ K + D++E K KE+ + + +++
Sbjct: 1103 KKHEESKSRKKEEDKKDMEKLEDQNSNK-KKEDKNEKKKSQHVKLVKKESDKKEKKENEE 1161
Query: 548 EISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSR 607
+ ++S K + D S+ D Q++ E +KK + +++ +K+T+
Sbjct: 1162 KSETKEIES--SKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVE 1219
Query: 608 SPNVDKNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENI 667
K +E N ++ T K S E+ E +K +SQ T D DE+
Sbjct: 1220 ENKKQKETKKEKNKPKDDKKNTT--KQSGGKKESMESESKEAENQQKSQATTQADSDESK 1277
Query: 668 QSYISE-NEQKNCFIETENQISNNDEICMLPLNSNNTNIDTSKSDTTKILLESEKSVNNV 726
+ + + Q + +++ + ++ +S T ++ D K +E
Sbjct: 1278 NEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKE 1337
Query: 727 TNE 729
T E
Sbjct: 1338 TKE 1340
Score = 45.2 bits (102), Expect = 8e-04
Identities = 112/600 (18%), Positives = 227/600 (37%), Gaps = 55/600 (9%)
Query: 93 GSSKTLNTFINKA-VESDIQVGSRRLSKADSTIGGSTVQESQTVLNYCNKSNQQITESEN 151
G S N +K +S+++V S G ++S NK +Q ++ +
Sbjct: 665 GDSTNDNNMESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSMEDKKLENKESQTDSKDDK 724
Query: 152 VICDKNRSV-IVGKKRGRKPKQKIMGTRKPSSP-PQTYLQEDILSTNMLSNQTEDEESLE 209
+ DK I G + + G +K S +T E+ + + Q +ES +
Sbjct: 725 SVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENKKTKTNENRVRNKEENVQGNKKESEK 784
Query: 210 INKNHHNRPSKDKIFETNQTTTSEADSTNNIEMSAECTNSSN-----DLKMKICPKAKEK 264
+ K K ET + ST N + + E + N + K +AKEK
Sbjct: 785 VEKGEKKESKDAKSVETKDN--KKLSSTENRDEAKERSGEDNKEDKEESKDYQSVEAKEK 842
Query: 265 IFPSHSYKDLTTQLSN-QDIRNQHNSSKVELIXXXXXXXXXXXXXXTHDDKIVNTTTNVD 323
+ + T + N +D ++ + VE+ +DK
Sbjct: 843 ----NENGGVDTNVGNKEDSKDLKDDRSVEVKANKEESMKKKREEVQRNDKSSTKEVRDF 898
Query: 324 KNQSEVIIDD---LPILHNTMLKKSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNM 380
N ++ + + + KK ++K + +S + + K + + ++
Sbjct: 899 ANNMDIDVQKGSGESVKYKKDEKKEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKK 958
Query: 381 SENERKKSHLNSVTENQDSDGD---DEISLLSLKSFAAQQLLENRDILSPINKPDDQEQS 437
E ++K+ N + + +D+ + E S L ++ ++ E+ D S + + E+
Sbjct: 959 KEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEK 1018
Query: 438 NSTKVDTIKKKRGRPKKIYENKMINKSLNVDKNQSEATNHVLLIAQNSTVLKTPIISEDN 497
S + KK++ KK + K K K++ E + S LK E+
Sbjct: 1019 KSKTKEEAKKEK---KKSQDKKREEKDSEERKSKKEK--------EESRDLKAKKKEEET 1067
Query: 498 LEFKSSDIVKSQVLLPPIITLNDEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSY 557
E K S+ KS+ ED+ + + K+ KE + + ++ S K
Sbjct: 1068 KEKKESENHKSK---------KKEDKKEHE-DNKSMKKEEDKKEKKKHEESKSRK--KEE 1115
Query: 558 APKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQ 617
K + D + D E+ S +V+ +KK+ + +K N +K++++
Sbjct: 1116 DKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKK---------ENEEKSETK 1166
Query: 618 EINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQK 677
EI Q V K S++++ + E + +E + + N+ED Q+ + EN+++
Sbjct: 1167 EIESSKS--QKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQ 1224
Score = 39.9 bits (89), Expect = 0.029
Identities = 92/579 (15%), Positives = 223/579 (38%), Gaps = 42/579 (7%)
Query: 130 QESQTVLNYCNK-SNQQITESENVICDKNRSVIVGKKRGRKPKQKIMGTRKPSSPPQTY- 187
+ES N NK N+++ + +V N +KR + + K ++ +
Sbjct: 443 EESMKGENLENKVGNEELKGNASVEAKTNNESSKEEKREESQRSNEVYMNKETTKGENVN 502
Query: 188 LQEDILSTNMLSNQTEDEESLE--INKNHHNRPSKDKIFETNQTTTSEADSTNNIEMSAE 245
+Q + + + N E++E ++ ++ N + S + + Q + N++
Sbjct: 503 IQGESIGDSTKDNSLENKEDVKPKVDANESDGNSTKERHQEAQVNNGVSTEDKNLDNIGA 562
Query: 246 CTNSSNDLKMKICPKAKEKIFPSHSYKDLTTQLSNQDIRNQHNSSKVEL--IXXXXXXXX 303
ND +++ + + ++ T + + ++N++ +K + +
Sbjct: 563 DEQKKNDKSVEVTTNDGDH---TKEKREETQGNNGESVKNENLENKEDKKELKDDESVGA 619
Query: 304 XXXXXXTHDDKIVNTTTNVDKNQSEVIIDDLPILHNTMLKKSITGSDDKFELQSSDEPEA 363
+ ++K T D + + I+D+ ++ +K + D + + +
Sbjct: 620 KTNNETSLEEKREQTQKGHDNSINSKIVDNKGGNADSNKEKEVHVGDSTNDNNMESKEDT 679
Query: 364 PVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSDGDDEISLLSLKSFAAQQLLENRD 423
KS++ ++ + E K+++ +S+ + + + + + KS +Q E
Sbjct: 680 ---KSEVEVKKNDGSSEKGEEGKENNKDSMEDKKLENKESQTDSKDDKSVDDKQ--EEAQ 734
Query: 424 ILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYENKMINKSLNVDKNQSEATNHVLLIAQ 483
I +K D ++ K ++ K + K EN++ NK NV N+ E+ +
Sbjct: 735 IYGGESKDDKSVEAKGKKKES---KENKKTKTNENRVRNKEENVQGNKKESEKVEKGEKK 791
Query: 484 NSTVLKTPIISEDNLEFKSSDIVKSQVLLPPIITLNDEDEI----STDIEQKNCSKETIT 539
S K+ + ++DN + S++ D++E S + ++KN + T
Sbjct: 792 ESKDAKS-VETKDNKKLSSTENRDEAKERSGEDNKEDKEESKDYQSVEAKEKNENGGVDT 850
Query: 540 E-------SQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQCNSSNV------ 586
+ DD + + K + K+ + ST + ++ N+ ++
Sbjct: 851 NVGNKEDSKDLKDDRSVEVKANKEESMKKKREEVQRNDKSSTKEVRDFANNMDIDVQKGS 910
Query: 587 -EPIK-----KKRGRPKKNYEK-KTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYS 639
E +K KK G ++N + T+S+ DK + ++ + + + K
Sbjct: 911 GESVKYKKDEKKEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNE 970
Query: 640 ENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQKN 678
K+ NK ET +E+ + ++D + ++ KN
Sbjct: 971 LKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKN 1009
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 49.6 bits (113), Expect = 4e-05
Identities = 85/482 (17%), Positives = 200/482 (41%), Gaps = 39/482 (8%)
Query: 204 DEESLEINKNHHNRPSKDKIFETNQTTTSEADSTNNIEMSAECTNSSNDLKMKICPKAKE 263
+ E++E K + + +KI ++ +T + +S +++ S+E + + + KAKE
Sbjct: 1035 EAENIENIKENEEEQAAEKIQKSLETVQT-VESPSSLLFSSEEQDHVTVAEEIVDEKAKE 1093
Query: 264 KIFPSHSYKDLTTQLSNQDIRNQHNSSKVELIXXXXXXXXXXXXXXTHD-DKIVNTTTNV 322
++ P Q+ N+D + + ++VE + ++ V +
Sbjct: 1094 EV-PM-------LQIKNEDDATKIHETRVEQARDIGPSLTEICSINQNQPEEQVKEACSK 1145
Query: 323 DKNQSEVIIDDLPILHNTMLKKSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSE 382
++ + E+ + I++ T S+ ++++ + KS ++ + E+
Sbjct: 1146 EEQEKEISTNSENIVNETYALHSVEAAEEETATNGESLDDVETTKSVLLEVRKEEEEAEM 1205
Query: 383 NERKKSHLNSVTENQDSDGDDEISLLSLKSFAAQQLLENRDILSPINKPDDQEQSNSTKV 442
+ L+++ + + L ++K+ + N N+ +S S K
Sbjct: 1206 KTDAEPRLDAIEKEE---------LETVKTVVQDAKIVN-------NEETTAHESESLKG 1249
Query: 443 DTIKKKRGRPKKIYEN----KMINKSLNVD-KNQSEATNHVLLIAQNSTVLKTPIISEDN 497
D ++K P + +N + I++ + VD + +++ T + + + TV++TP I ++
Sbjct: 1250 DNHQEKNAEPVEATQNLDDAEQISREVTVDTEREADITEKIEKVQEGPTVIETPTIQGED 1309
Query: 498 LEFKSSDIVKSQVLLPPIITLNDEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSY 557
+E ++S +K +V T E + DI Q K ++ ++ I L L++
Sbjct: 1310 IESETSLELKEEVDQSSKDTEEHEHVLERDIPQCETLKAEAVDTSTVEEAAI-LKTLETN 1368
Query: 558 APKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEK--KTTSRSPNVDKNQ 615
+ +++ + L Q++ + + G E+ + T + K++
Sbjct: 1369 ISEPEAMHSETSLDLKVDKEQKEAETVKTVIFSNEVGTSDAQAEEFGEHTEPCSSEIKDE 1428
Query: 616 SQEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENE 675
SQ + +++ TV S SE K+ N + Q ES+ N+ D ++ S +EN
Sbjct: 1429 SQGSEESVEVKSKETVQGES---SEEKD-VNMLDVQSGESEKYQENEPDISLVSK-TENG 1483
Query: 676 QK 677
K
Sbjct: 1484 DK 1485
Score = 38.7 bits (86), Expect = 0.067
Identities = 85/449 (18%), Positives = 172/449 (38%), Gaps = 40/449 (8%)
Query: 351 DKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTEN--QDSDGD--DEIS 406
++ ++Q A V+ + I ++ ++ E E S QD +G ++IS
Sbjct: 2308 EEVKVQEETREIAQVLPREEILISSSPLSAEEQEHVISDEKQEEREPQQDFNGSTSEKIS 2367
Query: 407 LL--SLKSFAAQQLLENRDILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYENKMINKS 464
L LK F + E +D K +DQ VD KK+ ++ + + K
Sbjct: 2368 LQVEHLKDFETSKK-EQKDETHETVKEEDQI------VDIKDKKKDDEEQEIVSSEVKKD 2420
Query: 465 LNVDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVLLPPIITLND---- 520
N D + E N ++++ + P + +N E + + + + P+ +
Sbjct: 2421 -NKDARELEVGND--FVSRDGEKEEVPHNALENEEEMNEVVASEKQISDPVGVIKKASEA 2477
Query: 521 EDEISTDIEQKNCSKETITESQISDD-DEISLMCLKSYAPKQLLDNTDITTPLST--PDN 577
E E D + N ++ TE D DE+S PK+ + ++ P S D
Sbjct: 2478 EHEDPVDDIKSNDDRDFPTEQAPKDQSDEVSA---DETVPKEAIGE-ELKVPSSKVLDDI 2533
Query: 578 QEQCNSSNVEPIKKKRGRPKKNYEKKTTS-RSPNVDKNQSQEINDGLQIVQSPTVPKTST 636
QE N+ V R P +N + S +SPN + S E N + + TV T
Sbjct: 2534 QENSNTEAVTNFAD-RDLPVQNLSELIQSHQSPNQVEETSFEFNKAQEDKKEETVDALIT 2592
Query: 637 TYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQKNCFIET---ENQISNNDEI 693
+P E E ++ ++++ + E +++ +++I +
Sbjct: 2593 NVQVQDQPKEDFEAAAIEKEI---SEQEHKLNDLTDVQEDIGTYVKVQVPDDEIKGDGHD 2649
Query: 694 CMLPLNSNNTNIDTSKSDTTKILLESEKSVNNVTN----ESCVPNSDEAEQPLVNDTSGR 749
+ ++I+ K + + E E ++ + + + N D + G+
Sbjct: 2650 SVAAQKEETSSIE-EKREVEHVKAEMEDAIKHEVSVEEKNNTSENIDHEAAKEIEQEEGK 2708
Query: 750 PVRRVIRKPIQYDEESDEDPFANVELSDD 778
V + + ++E +++ F NV+ +DD
Sbjct: 2709 QTNIVKEEIREEEKEINQESFNNVKETDD 2737
Score = 35.5 bits (78), Expect = 0.63
Identities = 61/309 (19%), Positives = 126/309 (40%), Gaps = 32/309 (10%)
Query: 355 LQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSDGDDEISL-LSLKSF 413
++ ++ ++ + +N+E+ ++ E+E K + V ++SDG ++IS +++
Sbjct: 554 IEKAETENVKIVIEEPEIVNNEETSVHESESLKENAEPVEAVKNSDGTEQISREVTVDRA 613
Query: 414 AAQQLLENRDILSPINKPDDQEQSNSTK--VDTIKKKRGRPKKIYENKMINKSLNVDKNQ 471
+ + + + +P + + S K VD I + + + E + + + ++
Sbjct: 614 KEEDIAPKTEEIQ--ERPSESKASLEPKEEVDHISNETEEHEHVLE-RDVQQCETIESEA 670
Query: 472 SEATNHVLLIAQNSTVLKTPIISEDNLEFK---SSDIVKSQVLLPPIITLNDEDEISTDI 528
E Q S LK +E+ FK SSD V+S + E++
Sbjct: 671 VETKED----TQPSLDLKEDKETEEAETFKTVFSSDEVRSSAV--------QEEQFGEHT 718
Query: 529 EQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQCNSSNVEP 588
E CS E ES ++ + + ++ + D D+ ST + Q N
Sbjct: 719 EP--CSSEIKDESH-GKEESVEVKSQETVQDENTEDKHDVLKVPSTESEKYQGNEPETVL 775
Query: 589 IKKKRGRPKKNYEKKTTSRSPNVDKNQ--SQEIN----DGLQIVQSPTVPKTSTTYSENK 642
+ K EK + NVDK + ++IN DG QI++ P ++ +E
Sbjct: 776 VSNTGSYEKS--EKSPSDLVLNVDKEELNDEKINVDQVDGTQIMEEPIGLDSNGAEAEQI 833
Query: 643 EPSNKSETQ 651
+ + +ET+
Sbjct: 834 DQNITNETE 842
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 47.2 bits (107), Expect = 2e-04
Identities = 84/464 (18%), Positives = 170/464 (36%), Gaps = 21/464 (4%)
Query: 348 GSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSDGDDEISL 407
G ++ E ++E E K T +E E+E ++ N TE + G +E +
Sbjct: 172 GGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKENGGTEENEKSGSEESEV 231
Query: 408 LSLKSFAAQQLLENRDIL--SPINKPDDQEQSNSTKVDTIKKKRGRPK-KIYENKMINKS 464
K + + S + + D S ++V+ K+ RG + + + K I++
Sbjct: 232 EEKKDNGGTEESREKSGTEESEVEEKKDNGSSEESEVEEKKENRGIDESEESKEKDIDEK 291
Query: 465 LNVDK---NQSEATNHVLLIAQNSTVLKTPIISEDNLEFKS---SDIVKSQVLLPPIITL 518
N+++ N + + + S + + + +E KS ++ V+ V+ +
Sbjct: 292 ANIEEARENNYKGDDASSEVVHESEEKTSESENSEKVEDKSGIKTEEVEDSVIKSVLPNT 351
Query: 519 NDEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDN------TDITTPL 572
D E S+D + S ++S E M K+ D+ T +T
Sbjct: 352 TDNGESSSDEKSTGSSSGHESDSLEGIKSEGESMEKNELLEKEFNDSNGESSVTGKSTGS 411
Query: 573 STPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPN--VDKNQSQEINDGLQIVQSPT 630
+QE S+ E K K K E + S + + + +E + + + T
Sbjct: 412 GDGGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDKET 471
Query: 631 VPKTST-TYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQKNCFIETENQISN 689
K + S+ K ++E + T EDE + S +++K ETE + +
Sbjct: 472 EAKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNE 531
Query: 690 NDEICMLPLNSNNTNIDTSKSDTTKILLESEKSVNNVTNESCVPNSDEAEQPLVNDTSGR 749
+ N I+ ++ + + E+E S + E E +
Sbjct: 532 ESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESA 591
Query: 750 PVRRVIRKPIQYDEESDEDPFANVELSDDDLTNGKKNRYYSDDE 793
P K +E+ +++ A+ E + + T K+ S +E
Sbjct: 592 PQEETKEKE---NEKIEKEESASQEETKEKETETKEKEESSSNE 632
Score = 41.5 bits (93), Expect = 0.010
Identities = 114/612 (18%), Positives = 220/612 (35%), Gaps = 36/612 (5%)
Query: 597 KKNYEKKTTSRSPNVDKNQS-QEINDGLQIVQSPTVPKTSTTY-SENKEPSNKSETQVTE 654
++N EK++ N D N +E D + +S K +E E S E++V E
Sbjct: 108 EENKEKESEGIVSNEDSNSEIEEKKDSGGVEESEVEEKRDNGGGTEENEKSGTEESEVEE 167
Query: 655 SQVITLNDEDENIQSYISE-NEQKNCFIETENQISNNDEICMLPLNSNNTNIDTSKSDTT 713
+ +E+E + SE E+K+ EN+ S +E + N + KS +
Sbjct: 168 RKDNGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKENGGTEENEKSGSE 227
Query: 714 KILLESEKSVNNVTNESCVPNSDEAEQPLVNDTSGRPVRRVI--RKPIQYDEESDEDPFA 771
+ +E EK N T ES + E + +G + +K + +ES+E
Sbjct: 228 ESEVE-EKKDNGGTEESREKSGTEESEVEEKKDNGSSEESEVEEKKENRGIDESEESKEK 286
Query: 772 NVELSDDDLTNGKKNRYYSDDEC--IPHGTKKRKGKAXXXXXXXXXXXXXXXKKKKSS-K 828
+++ ++ ++N Y DD + H ++++ ++ + + S K
Sbjct: 287 DID-EKANIEEARENNYKGDDASSEVVHESEEKTSESENSEKVEDKSGIKTEEVEDSVIK 345
Query: 829 LLDGPSPXXXXXXXXXXXXXXXXCNEQNKYCNVRI-GDTNECLESSINQFHDDNDNNETL 887
+ + +E + ++ G++ E E +F+D N +
Sbjct: 346 SVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIKSEGESMEKNELLEKEFNDSNGESSV- 404
Query: 888 CELKSSSATDEFESFLAXXXXXXXXXXXXXXXSDMTDNALTTLQIPVLDPK-EIKKSIDT 946
+ +T + S+ D ++ Q D + E K+ ++
Sbjct: 405 ----TGKSTGSGDGGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEES 460
Query: 947 SSQTETALTKSAAVQTCHRYNLPMKANVSLSEGQSVKACEFL-SNIVNTTVELGQLMTQK 1005
SSQ ET ++ A + K S E K E + S+ + T E +K
Sbjct: 461 SSQEETMDKETEAKE---------KVESSSQEKNEDKETEKIESSFLEETKEKEDETKEK 511
Query: 1006 SEDFIKRKINVENVTDTLKMDYCVK----KSFLLFKLAKHNLTQMEEDLATQYNTFLKEQ 1061
E + K E T+T + K K+ K + EE + T KE+
Sbjct: 512 EESSSQEKTE-EKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEE 570
Query: 1062 NLSWVREEEKE---ITASTKVSDDSDCEIVEEIVQPTKEGKDHLNSEVDTFTRKMREKIR 1118
+ S +EKE I + E E ++ + E +T T++ E
Sbjct: 571 SSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSS 630
Query: 1119 QNQKKNVFSESESDIPL-DIRXXXXXXXXXXXXXXXXXXTKQSTNKVPEVEIQCNNVDST 1177
++NV +ESE + + T+Q ++ + + N T
Sbjct: 631 NESQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGET 690
Query: 1178 QQFQDNNESSQE 1189
+ Q+ ++SS +
Sbjct: 691 EVTQEQSDSSSD 702
Score = 41.1 bits (92), Expect = 0.013
Identities = 78/411 (18%), Positives = 163/411 (39%), Gaps = 25/411 (6%)
Query: 343 KKSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSDGD 402
KK G D+ E + D E I+ D SE + S +EN + D
Sbjct: 271 KKENRGIDESEESKEKDIDEKANIEEARENNYKGDDASSEVVHESEEKTSESENSEKVED 330
Query: 403 DE-ISLLSLKSFAAQQLLENRDILSPINKPDDQEQSNST-KVDTIKKKRGRPKKIYENKM 460
I ++ + +L N + + S+S + D+++ + + + +N++
Sbjct: 331 KSGIKTEEVEDSVIKSVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIKSEGESMEKNEL 390
Query: 461 INKSLNVDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVLLPPIITLND 520
+ K N +S T + + + S++ + K S+ K + D
Sbjct: 391 LEKEFNDSNGESSVTGKSTGSGDGGSQETSEVSSQEESKGKESE-TKDKEESSSQEESKD 449
Query: 521 EDEISTDIEQKNCSKETIT-ESQISDDDEISLMCLKSYAPKQLLDNTDIT-TPLSTPDNQ 578
+ + + E+ + +ET+ E++ + E S + ++++ + T + +
Sbjct: 450 RETETKEKEESSSQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETK 509
Query: 579 EQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVD--KNQSQEINDGLQIVQSPTVPKT-- 634
E+ SS+ E ++K K N E + + + + K + +E + + ++ T K
Sbjct: 510 EKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKE 569
Query: 635 -STTYSENKEPSN-KSETQVTESQVITLNDEDENIQSY--ISENEQKNCFIET------- 683
S++ E KE N K E + + Q T E+E I+ S+ E K ET
Sbjct: 570 ESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESS 629
Query: 684 -----ENQISNNDEICMLPLNSNNTNIDTSKSDTTKILLESEKSVNNVTNE 729
EN + +++ + N T+ DTS+S + ++E+ + T+E
Sbjct: 630 SNESQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSE 680
Score = 37.5 bits (83), Expect = 0.16
Identities = 57/316 (18%), Positives = 128/316 (40%), Gaps = 22/316 (6%)
Query: 347 TGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSDGDDEIS 406
TGS D ++S+ K + D++ + S+ E K + + + S ++ +
Sbjct: 409 TGSGDGGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMD 468
Query: 407 LLSLKSFAAQQLLENRDILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYENKMINKSLN 466
K A++ +E+ N+ + E+ S+ ++ K+K K+ E+ K+
Sbjct: 469 ----KETEAKEKVESSS--QEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKT-- 520
Query: 467 VDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVLLPPIITLNDEDEIST 526
++ ++E ++ +Q T K +N + + + + +++E S+
Sbjct: 521 -EEKETETKDNEESSSQEETKDK------ENEKIEKEEASSQEESKENETETKEKEESSS 573
Query: 527 DIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQCNSSNV 586
E K E I + + + +E + ++ + T T +++ +SSN
Sbjct: 574 QEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEE-TKEKETETKEKEESSSN- 631
Query: 587 EPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSN 646
E + +K + + + + D ++S + N S T K S SE +E +
Sbjct: 632 ESQENVNTESEKKEQVEENEKKTDEDTSESSKENS-----VSDTEQKQSEETSEKEESNK 686
Query: 647 KSETQVTESQVITLND 662
ET+VT+ Q + +D
Sbjct: 687 NGETEVTQEQSDSSSD 702
Score = 35.5 bits (78), Expect = 0.63
Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 15/238 (6%)
Query: 511 LLPPIITLND-EDEISTDI-EQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDI 568
L+P ++ +++ EDE S ++ E N E++I + E + K + ++ N D
Sbjct: 69 LIPRVVEVDEAEDEGSKNVVESFNSGNGDDKENEIVEGGEEN----KEKESEGIVSNEDS 124
Query: 569 TTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDK--NQSQEINDGLQIV 626
+ + + S VE + G ++N EK T S ++ N E N+
Sbjct: 125 NSEIEEKKDSGGVEESEVEEKRDNGGGTEEN-EKSGTEESEVEERKDNGGTEENEKSGTE 183
Query: 627 QSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQK--NCFIETE 684
+S + +E E S E++V E + +E+E S SE E+K N E
Sbjct: 184 ESEVEERKDNGGTEENEKSGTEESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEES 243
Query: 685 NQISNND--EICMLPLNSNNTNIDTSKSDTTKILLESEKSVNNVTNESCVPNSDEAEQ 740
+ S + E+ N ++ + + + + ESE+S +E N +EA +
Sbjct: 244 REKSGTEESEVEEKKDNGSSEESEVEEKKENRGIDESEESKEKDIDEKA--NIEEARE 299
Score = 31.9 bits (69), Expect = 7.7
Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 4/150 (2%)
Query: 1346 QEIASKDNQDREIDRLTDLTSLNRIPKEMTTKSRPRSKESKHEKNQQNVSSDARLPHLE- 1404
+E K+N+ E + + E K S+E EK + + + P E
Sbjct: 537 EETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEET 596
Query: 1405 ---QHELXXXXXXXXXXXXXXXXMPTRNVENNIAKDSLMNDSGDEDKTECIEEEPEHISV 1461
++E T+ E + + +S N + + +K E +EE +
Sbjct: 597 KEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDE 656
Query: 1462 PKRPGPKSKTVPESKAEKSIMLTADKVMNK 1491
K +V +++ ++S + + NK
Sbjct: 657 DTSESSKENSVSDTEQKQSEETSEKEESNK 686
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 46.0 bits (104), Expect = 4e-04
Identities = 75/359 (20%), Positives = 149/359 (41%), Gaps = 26/359 (7%)
Query: 374 NDEDVNMSENERKKSHLNSVTENQDSDGDDEISLLSLKSFAAQQLLENRDILSPINKPDD 433
+DE+ E K +S E DS D+EI+ A++ E + D
Sbjct: 72 SDEEEKTKETPSKLKDESSSEEEDDSSSDEEIA-------PAKKRPEPIKKAKVESSSSD 124
Query: 434 QEQSNSTKVDTIKKKRGRPKKIYENKMINKSLNVDKNQSEATNHVLLIAQNSTVLKTPII 493
+ ++ + +KK +P + + K+ + S + D + E T V + Q + + K I
Sbjct: 125 DDSTSDEETAPVKK---QPAVLEKAKVESSSSDDDSSSDEET--VPVKKQPAVLEKAKIE 179
Query: 494 SEDNLEFKSSD----IVKSQVLL---PPIITLNDEDEISTDIEQKNCSKETITESQISDD 546
S + + SSD +K Q + + + +D S+D E KE I + S D
Sbjct: 180 SSSSDDDSSSDEETVPMKKQTAVLEKAKAESSSSDDGSSSDEEPTPAKKEPIVVKKDSSD 239
Query: 547 DEISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTS 606
+ S K T + + + E+ +SS+ EP K+ KN +
Sbjct: 240 ESSSDEETPVVKKK---PTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVVKNAKPAAKD 296
Query: 607 RSPNVDKNQSQEINDGLQIVQSPTV-PKTSTTYSENKEPSNKSETQVTESQVITLNDEDE 665
S + + + +E +D + V KTS S + E S++S+ + ++ + +T +D
Sbjct: 297 SSSSEEDSDEEESDDEKPPTKKAKVSSKTSKQESSSDESSDESDKEESKDEKVTPKKKDS 356
Query: 666 NIQSYISENEQKNCFIETENQISNNDEICMLPLNSNNTNIDTSKSDTTKILLESEKSVN 724
+++ + + EQK+ + + +N + L + N + ++SD E+ + V+
Sbjct: 357 DVE--MVDAEQKSNAKQPKTP-TNQTQGGSKTLFAGNLSYQIARSDIENFFKEAGEVVD 412
Score = 32.3 bits (70), Expect = 5.8
Identities = 48/276 (17%), Positives = 102/276 (36%), Gaps = 8/276 (2%)
Query: 342 LKKSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSDG 401
+KK+ S + +SDE APV K + + + S ++ S +V +
Sbjct: 113 IKKAKVESSSSDDDSTSDEETAPVKKQPAVLEKAKVESSSSDDDSSSDEETVPVKKQPAV 172
Query: 402 DDEISLLSLKSFAAQQLLENRDILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYENKMI 461
++ + S S E + ++ ++ S+ D P + ++
Sbjct: 173 LEKAKIESSSSDDDSSSDEETVPMKKQTAVLEKAKAESSSSDDGSSSDEEPTPAKKEPIV 232
Query: 462 NKSLNVDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVLLPPIITLNDE 521
K + D++ S+ V+ + V S + E SSD + P ++
Sbjct: 233 VKKDSSDESSSDEETPVVKKKPTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVV----- 287
Query: 522 DEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQC 581
+ + + + S E ++ + SDD++ K+ + + S ++E+
Sbjct: 288 -KNAKPAAKDSSSSEEDSDEEESDDEKPPTK--KAKVSSKTSKQESSSDESSDESDKEES 344
Query: 582 NSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQ 617
V P KK + E+K+ ++ P NQ+Q
Sbjct: 345 KDEKVTPKKKDSDVEMVDAEQKSNAKQPKTPTNQTQ 380
>At3g06980.1 68416.m00829 DEAD/DEAH box helicase, putative contains
Pfam profile: PF00270 DEAD/DEAH box helicase
Length = 781
Score = 42.7 bits (96), Expect = 0.004
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Query: 2098 NKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEV 2157
NK A+ QI+EE K +IF + T +E +++ ++ E
Sbjct: 621 NKKTALLQIMEENPV--SKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQES 678
Query: 2158 RQKWCREFNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRF 2217
R +EF + + LFL+ T S G++ + + V++ D +P+ ++ + R R
Sbjct: 679 RLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTARG 738
Query: 2218 GQRK-DCYIYRFVAMGTMEQKIYERS 2242
+ K +I+ + ++I ER+
Sbjct: 739 ARGKGKAFIFVVGKQVGLARRIIERN 764
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 42.3 bits (95), Expect = 0.005
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 520 DEDEISTDIEQKNCS--KETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPL--STP 575
+EDE + +K+ S +E+ + + + ++ +L LKS + ++DNT + T S+P
Sbjct: 39 EEDESKPEGVEKSASFKEESDFFADLKESEKKALSDLKSKLEEAIVDNTLLKTKKKESSP 98
Query: 576 --DNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPK 633
+ +E+ E KKK ++ E++ S + ++ E + +V +PK
Sbjct: 99 MKEKKEEVVKPEAEVEKKKEEAAEEKVEEEKKSEAVVTEEAPKAETVEA--VVTEEIIPK 156
Query: 634 TSTTY------SENKEPSNKSETQVTE---SQVITLNDEDENIQSYI 671
T E KE K+E VTE ++ I + DEDE++ I
Sbjct: 157 EEVTTVVEKVEEETKEEEKKTEDVVTEEVKAETIEVEDEDESVDKDI 203
>At5g50840.2 68418.m06299 expressed protein
Length = 405
Score = 41.9 bits (94), Expect = 0.007
Identities = 85/416 (20%), Positives = 169/416 (40%), Gaps = 27/416 (6%)
Query: 338 HNTMLKKSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQ 397
H+ +L + + D F + + EP K+Q T N E V + + E+ ++ + E
Sbjct: 5 HSNLLPE-VDSLPDGF-VDGATEPPLNSPKTQEETTNHETVAIEKTEKPRTFPVPLCET- 61
Query: 398 DSDGDDEISLLSLKSFAAQQLLENRD------ILSPINKPDDQEQSNSTKVDTIKKKRGR 451
D + DDE++ L +S + E ++ I +++ Q + S ++D++K K +
Sbjct: 62 DGNEDDEVADLIQESIKLELEFEQKEKEASPPISQTLSEGSTQNSTLSKEMDSLKPK--K 119
Query: 452 PKKIYENKMINKSLNVDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVL 511
+++ E+K S N+ K++ E +L Q + + I D LE ++ + +
Sbjct: 120 QQEVVESKR-KGSKNMFKSEKEFLEFMLKYQQVLSERDSAITVRDKLESLCRELQRQNKM 178
Query: 512 LPPIITLNDEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTP 571
L + + +ST+ + T + I D I L K+ + QL +N + T
Sbjct: 179 L-----MEECKRVSTEGQTLRSDLSTKFQDAIM-DVSIKLDEQKNESLTQLKENEMLRTK 232
Query: 572 LSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTV 631
L +Q + E K++ + K + QSQ Q+ Q +
Sbjct: 233 LKHLADQFMLSEQQHEQRLKQKTLELQISALKIKQHEEKLIHEQSQMKVYADQVSQLLST 292
Query: 632 PKTSTTY--SENKEPSNKSETQVTESQVI-TLNDEDENIQSYISENEQKNCFIETENQIS 688
K S+ + + V ++V T E + + I E ++N F++ + + S
Sbjct: 293 EKNLRLQLTSDGDKFQQFQDALVKSNEVFETFKQEIDKMSKAIKELRKENAFLKNKTEKS 352
Query: 689 NNDEICMLPLNSNNTNID--TSKSDTTKILLESE-KSVNNVTNESCVPNSDEAEQP 741
+I ++ L + K+ K LES +S+ + ++D A QP
Sbjct: 353 ---DITLIELVEERERLKKLLEKTKKQKDKLESLCRSLQAERKQKETNSTDSAVQP 405
>At5g50840.1 68418.m06298 expressed protein
Length = 404
Score = 41.5 bits (93), Expect = 0.010
Identities = 85/416 (20%), Positives = 169/416 (40%), Gaps = 28/416 (6%)
Query: 338 HNTMLKKSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQ 397
H+ +L + + D F + + EP K+Q T N E V + + E+ ++ + E
Sbjct: 5 HSNLLPE-VDSLPDGF-VDGATEPPLNSPKTQEETTNHETVAIEKTEKPRTFPVPLCET- 61
Query: 398 DSDGDDEISLLSLKSFAAQQLLENRD------ILSPINKPDDQEQSNSTKVDTIKKKRGR 451
D + DDE++ L +S + E ++ I +++ Q + S ++D++K K+
Sbjct: 62 DGNEDDEVADLIQESIKLELEFEQKEKEASPPISQTLSEGSTQNSTLSKEMDSLKPKK-- 119
Query: 452 PKKIYENKMINKSLNVDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVL 511
+++ E+K S N+ K++ E +L Q + + I D LE ++ + +
Sbjct: 120 -QEVVESKR-KGSKNMFKSEKEFLEFMLKYQQVLSERDSAITVRDKLESLCRELQRQNKM 177
Query: 512 LPPIITLNDEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTP 571
L + + +ST+ + T + I D I L K+ + QL +N + T
Sbjct: 178 L-----MEECKRVSTEGQTLRSDLSTKFQDAIM-DVSIKLDEQKNESLTQLKENEMLRTK 231
Query: 572 LSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTV 631
L +Q + E K++ + K + QSQ Q+ Q +
Sbjct: 232 LKHLADQFMLSEQQHEQRLKQKTLELQISALKIKQHEEKLIHEQSQMKVYADQVSQLLST 291
Query: 632 PKTSTTY--SENKEPSNKSETQVTESQVI-TLNDEDENIQSYISENEQKNCFIETENQIS 688
K S+ + + V ++V T E + + I E ++N F++ + + S
Sbjct: 292 EKNLRLQLTSDGDKFQQFQDALVKSNEVFETFKQEIDKMSKAIKELRKENAFLKNKTEKS 351
Query: 689 NNDEICMLPLNSNNTNID--TSKSDTTKILLESE-KSVNNVTNESCVPNSDEAEQP 741
+I ++ L + K+ K LES +S+ + ++D A QP
Sbjct: 352 ---DITLIELVEERERLKKLLEKTKKQKDKLESLCRSLQAERKQKETNSTDSAVQP 404
>At5g07810.1 68418.m00895 SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein similar to HepA-related protein
HARP [Homo sapiens] GI:6693791; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF01844: HNH endonuclease
Length = 1190
Score = 41.5 bits (93), Expect = 0.010
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 1746 GSGCILAHCMGLGKTLQVLALLHTVLTHPGVGIQRVLVCCPLSTVLNWVDEIHKWI 1801
G C +A MGLGKTLQ +A+ ++ +LV CP W +E+ +W+
Sbjct: 219 GGRCFIADEMGLGKTLQAIAIAGCFISEGS-----ILVVCPAVLRFTWAEELERWL 269
>At1g75150.1 68414.m08729 expressed protein ; expression supported
by MPSS
Length = 753
Score = 41.1 bits (92), Expect = 0.013
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 672 SENEQKNCFIETENQISNND-EICMLPLNSNNTNIDTSKSDTTK-ILLESEKSVNNVTNE 729
SEN E E+ ++ D +C +NS + ++ S + + ++ S ++N N
Sbjct: 317 SENSDSPSKREAESNPTHQDPSVCPQTINSGDELLEKMSSRSLEEVMTPSVVAMNLKLNL 376
Query: 730 SCVPN--SDEAE------QPLVNDTSGRPVRRVIRKPIQYDEESDEDPFANVELSDDD 779
S VP+ S+EAE P ++D+ G PVR+ I + + +++SD D E DDD
Sbjct: 377 SPVPDKSSEEAEYIKGNSDPEIHDSPGDPVRKFIDEDAEEEDDSDND-LLRFEDEDDD 433
>At5g17160.1 68418.m02010 expressed protein
Length = 569
Score = 39.5 bits (88), Expect = 0.039
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 613 KNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNK--SETQVTESQVITLNDEDENIQSY 670
KN S +I L+++ V +T NKE N+ ++ + +E+ ++ ++ E+E +Q+
Sbjct: 227 KNDSDKIAGDLEVI---VVMDANT--EANKEEMNEVTADKKESENSLVQVDKEEETLQAI 281
Query: 671 ISENEQKNCFIETENQISNNDEICMLPLNSNNTNIDTSKSDTTKILLESEKSVNNVTNES 730
E +KN + + ++ +PL + + + +K +L ++SV+ E
Sbjct: 282 CEEGPKKNDNDQEIGDLVIYVDVSDIPLLESAITETHNDDNESKNVLAIDRSVDQQETEH 341
Query: 731 CVPNSDEAEQPLVNDTSGRPVRRVIRKPIQYDEESDEDP 769
+ +D + VN T ++ IQ E+D +P
Sbjct: 342 AIQENDAEPETKVNQTDSDAGDSKTKQAIQ---ENDSEP 377
>At3g54460.1 68416.m06025 SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein similar
to SP|P36607 DNA repair protein rad8 {Schizosaccharomyces
pombe}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00646: F-box domain
Length = 1378
Score = 39.5 bits (88), Expect = 0.039
Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 2115 DKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEVRQKWCREFNAENNIKTK 2174
DKVLIFS L + +E L + G + ++ + + K F + +
Sbjct: 1194 DKVLIFSQFLEHIHVIEQQLT-----TAGIKFGKMYSPMQSYNKMKALAMFQNDADC--- 1245
Query: 2175 LFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCYIYRFVAMGTM 2234
+ L+ +G+LGL+++ V +++ W+ + + Q I R +R G ++ ++ GT+
Sbjct: 1246 MALLMDGSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTI 1305
Query: 2235 EQKI 2238
E+++
Sbjct: 1306 EEQM 1309
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 39.1 bits (87), Expect = 0.051
Identities = 57/296 (19%), Positives = 114/296 (38%), Gaps = 14/296 (4%)
Query: 1336 ESFVNVYFQYQEIASKDNQDR-EIDRLTDLTSLNRIPKEMTTKSRPRSKESKHEKNQQNV 1394
E ++V + QE+ K+ + E++ S+ ++ + +S +SK+ K +K +NV
Sbjct: 10 EEKLHVKIKTQELDPKEKGENVEVEMEVKAKSIEKVKAKKDEESSGKSKKDKEKKKGKNV 69
Query: 1395 SSDARLPHLEQHELXXXXXXXXXXXXXXXXMPTRNVENNIAKDSLMNDSGDEDKTECIEE 1454
S+ + + + + + + + + + G E K E +EE
Sbjct: 70 DSEVK-EDKDDDKKKDGKMVSKKHEEGHGDLEVKESDVKVEEHEKEHKKGKEKKHEELEE 128
Query: 1455 EPEHISVPKRPGPKSKTVPESKAEKSIMLTADKVMNKELNLLNTPAVIQEEPIATTRKGP 1514
E E K K ++ PE K +K ADK E ++ ++EE +K
Sbjct: 129 EKEG-KKKKNKKEKDESGPEEKNKK-----ADKEKKHE-DVSQEKEELEEEDGKKNKK-- 179
Query: 1515 VTRXXXXXXXXXXXXQRGVATKEDSSSEEEKLWVNTXXXXXXXXXXXDNASVEDAKRAKL 1574
+ ++ KE+S S E+K ++ E+ K+
Sbjct: 180 KEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKED---EEKKKEHD 236
Query: 1575 VNEFIERRGDGLDSRKRTRNPRYRKSKKFLLEREKQLKTLSKELYGEAEGGPSGKG 1630
+ + D ++K+ ++ + KK ++EK+ K S E + G GKG
Sbjct: 237 ETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKG 292
Score = 37.1 bits (82), Expect = 0.21
Identities = 48/269 (17%), Positives = 98/269 (36%), Gaps = 19/269 (7%)
Query: 520 DEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPDNQE 579
++DE T+ ++K KE + + +++ + K K L+ D + +
Sbjct: 181 EKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDETDQ 240
Query: 580 QCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYS 639
+ + + KKK EKK +K++S E D K
Sbjct: 241 EMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKED----------KKLKGKKG 290
Query: 640 ENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQKNCFIETENQISNNDEICMLPLN 699
+ ++P + E + T+ T + D+ + E ++K + + + + DE+C
Sbjct: 291 KGEKPEKEDEGKKTKEHDATEQEMDDEAADH-KEGKKKKNKDKAKKKETVIDEVC----- 344
Query: 700 SNNTNIDTSKSDTTKILLESEKSVNNVTNESCVPNSDEAEQPLVNDTSGRPVRRVIRKP- 758
T TK +K + E V + E PL + R ++ + +P
Sbjct: 345 EKETKDKDDDEGETKQKKNKKKEKKSEKGEKDVKEDKKKENPLETEVMSRDIK--LEEPE 402
Query: 759 IQYDEESDEDPFANVELSDDDLTNGKKNR 787
+ EE D + ++ + GKK +
Sbjct: 403 AEKKEEDDTEEKKKSKVEGGESEEGKKKK 431
>At3g32330.1 68416.m04125 DNA repair protein-related weak similarity
to SP|P41410 DNA repair protein rhp54 (RAD54 homolog)
{Schizosaccharomyces pombe}
Length = 327
Score = 38.3 bits (85), Expect = 0.089
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 1875 IIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLL 1930
++V D G +N+ +SR+ T +++LTG+ QNN++E F +++ P L
Sbjct: 133 VVVFDRGTDPRNEMMSFLKVVSRIKTPHKVLLTGSLYQNNIKEVFNILDVAFPEFL 188
>At2g30620.1 68415.m03731 histone H1.2 nearly identical to SP|P26569
Histone H1.2 {Arabidopsis thaliana}
Length = 273
Score = 37.9 bits (84), Expect = 0.12
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 3231 PKAKRA--PKSNRPADNRTVINLTELGPVSSVTAPSKHTTSASTSKLPLSKSVTIVSKPS 3288
P A+ A PK P + + G V++ AP+K +A +K P +K +V+K
Sbjct: 129 PSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAK---VVAKAK 185
Query: 3289 NIALHKKTICLIAPKMMTIKTVNDNKKRPSILTKVKPVLATKLVMKDVKTKKRTIPSPP- 3347
A K + PK ++ V+ K ++ K K A + K +T RT P
Sbjct: 186 VTAKPKAKVTAAKPKSKSVAAVSKTK---AVAAKPK---AKERPAKASRTSTRTSPGKKV 239
Query: 3348 QQPAKKRKVNE 3358
PAKK V +
Sbjct: 240 AAPAKKVAVTK 250
>At5g50830.1 68418.m06297 expressed protein
Length = 281
Score = 37.5 bits (83), Expect = 0.16
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 13/140 (9%)
Query: 602 KKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYSENKE------PSNKSETQVTES 655
KK R + + + E NDG + P E KE PS +V E
Sbjct: 56 KKELLRHNSSEDGEDTEENDGSLKASAKVAPAPDHNVEEKKEVIYEKIPSKDDVKEVKEE 115
Query: 656 QVITLNDEDENIQSYISENEQKNCFIETENQISNNDEICMLPLNSNNTNIDTSKSDTTKI 715
V+ +ED + Q + + E++N + + + N+D+ ++ +N D D
Sbjct: 116 VVVNKQEEDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVV-INVKKEGDDGKNHDV--- 171
Query: 716 LLESEKSVNNVTNESCVPNS 735
E S+NN P S
Sbjct: 172 ---DEGSINNFDERMIGPGS 188
>At4g13110.1 68417.m02043 BSD domain-containing protein contains Pfam
profile PF03909: BSD domain
Length = 316
Score = 37.5 bits (83), Expect = 0.16
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 1059 KEQNLSWVREEEKEITASTKVSD-DSDCEIVEEIVQPTKEGKDHLN-SEVDTFTRKMREK 1116
++++LSW ++EKE S VS DSD ++ QP+ G + L +++ R E+
Sbjct: 228 EDEDLSWDLDDEKEKVESRDVSSKDSDYSVIS--TQPSLLGSEDLGWDKMEEDIRSNEER 285
Query: 1117 IRQNQKKNVFSESESDIPLDI 1137
+ ++ V E E D+ DI
Sbjct: 286 LDWRRRAGVAVEEEEDLSWDI 306
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 37.1 bits (82), Expect = 0.21
Identities = 64/308 (20%), Positives = 119/308 (38%), Gaps = 36/308 (11%)
Query: 332 DDLPILHNTMLKKSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLN 391
+D + ++M K+ TG+ D E Q D P + + D + + E E + S +
Sbjct: 313 NDSSVDTDSMKKQDDTGAKD--EPQQLDNPRNTDLNNTTEEKPDVEHQIEEKENESSSVK 370
Query: 392 SVTENQDSDGDDEISLLSLKSFAAQQLLENRDILSPINKPDDQEQSNSTKVDTIKKKR-- 449
++DSD +E L ++ +L + + S + E + V + K
Sbjct: 371 QADLSKDSDIKEETEPAEL--LDSKDVLTSPPVDSSVTAATSSENEKNKSVQILPSKTSG 428
Query: 450 ---------GRPKKIYENKMINKSLNVDKNQSEATNHVLLIAQNST--VLKTPIISEDNL 498
+++ E + K+ N K +S +T V A +T V + P SE +
Sbjct: 429 DETANVSSPSMAEELPEQSVPKKTANQKKKES-STEEVKPSASIATEEVSEEPNTSEPQV 487
Query: 499 EFKSSDIV----KSQVLLPPIITLNDEDEISTDIEQKNCSKETITESQISDDDEISLMCL 554
KS V K++ +PP E +++ E+K + ES +++
Sbjct: 488 TKKSGKKVASSSKTKPTVPPSKKSTSETKVAKQSEKKVVGSDNAQESTKPKEEK------ 541
Query: 555 KSYAPKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKN 614
K + +D + T S+ DN++ SS K K K+T SPN +
Sbjct: 542 KKPGRGKAIDEESLHT--SSGDNEKPAVSSG------KLASKSKKEAKQTVEESPNSNTK 593
Query: 615 QSQEINDG 622
+ + + G
Sbjct: 594 RKRSLGQG 601
Score = 36.3 bits (80), Expect = 0.36
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Query: 517 TLNDEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPD 576
T ++ ++ IE+K ++ ++ +S D +I + P +LLD+ D+ T
Sbjct: 348 TTEEKPDVEHQIEEKENESSSVKQADLSKDSDIK----EETEPAELLDSKDVLTSPPVDS 403
Query: 577 NQEQCNSSNVEPIKKKRGRPKKNYEKKTTS-RSPNVDKNQSQE------INDGLQIVQSP 629
+ SS E K + P K +T + SP++ + ++ N + +
Sbjct: 404 SVTAATSSENEKNKSVQILPSKTSGDETANVSSPSMAEELPEQSVPKKTANQKKKESSTE 463
Query: 630 TV-PKTSTTYSENKEPSNKSETQVTE 654
V P S E E N SE QVT+
Sbjct: 464 EVKPSASIATEEVSEEPNTSEPQVTK 489
>At3g32280.1 68416.m04116 hypothetical protein
Length = 474
Score = 37.1 bits (82), Expect = 0.21
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 1875 IIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPN 1928
++V D G +N+ +SR+ T +++LTG+ +NN++E F + + PN
Sbjct: 420 VVVFDRGTDPRNEMMCFLKVVSRIKTPHKVLLTGSLYKNNIKEVFNIFDVAFPN 473
>At5g47690.1 68418.m05887 expressed protein
Length = 1638
Score = 36.7 bits (81), Expect = 0.27
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 2334 QEHAHKQMQNELAANNTRISSKLQGHEYAKSPVPQPSPRKDEAPKTKRGKKNSAVPPQDS 2393
+ HA + + + N I + G+E + + + + KT++GKKN +VP +D
Sbjct: 1119 ESHADASVIPQTSENEVMIDGESDGNEIPLGKIVERL--RAQGTKTRKGKKNKSVPAEDE 1176
Query: 2394 AAESSIQGSLINEIRNILINHNFQISKSE 2422
++ + ++ +R I ++H + K E
Sbjct: 1177 NGKNDV--DVLKMVREINLDHLQMLDKFE 1203
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 36.7 bits (81), Expect = 0.27
Identities = 73/385 (18%), Positives = 153/385 (39%), Gaps = 32/385 (8%)
Query: 369 QIITLNDEDVNMSENERKKSHLNSVTENQDSDGDDEISLLSLKSFAAQQLLENRDILSPI 428
+I+ +E+ + EN K++ E + + E + +S ++ N +
Sbjct: 106 EIVEREEEEKAVEENNEKEAEGTGNEEGNEDSNNGESEKVVDESEGGNEI-SNEEAREIN 164
Query: 429 NKPDDQEQSNSTKVDTIKKKRGRPKKIYENKMIN-KSLNVDKNQSEATNHVLLIAQNSTV 487
K DD S+ T +K + + E+K + ++++V +++S N VL + S +
Sbjct: 165 YKGDDA--SSEVMHGTEEKSNEKVEVEGESKSNSTENVSVHEDESGPKNEVL---EGSVI 219
Query: 488 LKTPIISEDNLEFKSSDIVKSQVLLPPIITLNDEDEIST---DIEQKNCSKETITESQIS 544
+ + + +N SD + Q + + E S ++ + N S TE+ S
Sbjct: 220 KEVSLNTTEN----GSDDGEQQETKSELDSKTGEKGFSDSNGELPETNLSTSNATETTES 275
Query: 545 DDDEISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKT 604
+ S KS +Q + D +E+ SS E K+ G+ +K+
Sbjct: 276 SGSDESGSSGKSTGYQQTKNEED---------EKEKVQSSEEESKVKESGKNEKDASSSQ 326
Query: 605 TSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDED 664
+ + +E + + K S ++E S + E + E + + +E+
Sbjct: 327 DESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKEASSSQEEN 386
Query: 665 ENIQSYISENEQKNCFIETENQISNNDEICMLPLNSNNTNIDTSKSDTTKILLESEKSVN 724
E ++ I E E+ + EN+ + +S + + + S+ +ES S N
Sbjct: 387 EIKETEIKEKEESSSQEGNENKETEKK-------SSESQRKENTNSEKKIEQVESTDSSN 439
Query: 725 NVTNESCVPNSDEAEQPLVNDTSGR 749
T + +DE+++ NDTS +
Sbjct: 440 --TQKGDEQKTDESKRESGNDTSNK 462
>At4g29940.1 68417.m04259 pathogenesis-related homeodomain protein
(PRHA) identical to Pathogenesis-related homeodomain
protein (PRHA) (SP:P48785) [Arabidopsis thaliana)
Length = 796
Score = 36.7 bits (81), Expect = 0.27
Identities = 41/209 (19%), Positives = 90/209 (43%), Gaps = 10/209 (4%)
Query: 344 KSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSDGDD 403
K+++G D E + E ++ + D+ V + ++ L+ NQ+ +
Sbjct: 524 KTVSGGDSGPEAVMENNTETNEVQDTL----DDTVPPGFDATNQNILSPCNNNQEEFQQE 579
Query: 404 EISLLSLKSFAAQQLLENRDILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYE-NKMIN 462
+S S + +QQ LE D S + P +++ S + +++ K + E ++ ++
Sbjct: 580 NVSFPS-PTDESQQYLEQNDS-SFVLVPHEKQSSEISLKTAVEENETESKMMKEPHEELS 637
Query: 463 KSLNVDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVLLPPIITLNDED 522
+++ E +I + L + + +E K ++ S+++ P LN E
Sbjct: 638 SEMSLKTAAEEKETESKMIEEPHEELSREMSLKTAVEEKETE---SKMMEEPHDELNSEM 694
Query: 523 EISTDIEQKNCSKETITESQISDDDEISL 551
+ST +E+K + ES +E+SL
Sbjct: 695 SLSTAVEEKETGSKMTEESHEELSNEMSL 723
>At4g09730.1 68417.m01598 DEAD/DEAH box helicase, putative RNA
helicase -Mus musculus,PIR2:I84741
Length = 621
Score = 36.7 bits (81), Expect = 0.27
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 2098 NKFAAVFQILEECTALGDKVLIFSTSLFTLDALEYFLRKIKNWSLGHDYYRLDGSVPPEV 2157
+K A+ Q+LE A G KV++F +L + A++++L +N +Y+ G VP E
Sbjct: 354 DKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLS--ENQISTVNYH---GEVPAEQ 408
Query: 2158 RQKWCREF-NAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYR 2216
R + ++F + E + T L+ T + GL++ + V++ D N + R R
Sbjct: 409 RVENLKKFKDEEGDCPT---LVCTDLAARGLDLD-VDHVVMFDFPKNSIDYLHRTGRTAR 464
Query: 2217 FGQR 2220
G +
Sbjct: 465 MGAK 468
>At3g17520.1 68416.m02238 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to PIR|S04045|S04045 embryonic
abundant protein D-29 [Gossypium hirsutum]; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 298
Score = 36.7 bits (81), Expect = 0.27
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 194 STNMLSNQTEDEESLEINKNHHNRPSKDKIFETNQTTTSEADSTNNIEMSAECTNSSNDL 253
+++M S E E L+ ++ +K+KI E+ +T S+AD T +E + + + S D
Sbjct: 211 ASDMTSAAKEKAEKLKEEAERESKSAKEKIKESYETAKSKADET--LESAKDKASQSYDS 268
Query: 254 KMKICPKAKEKIFPSHSYKDLTTQLSNQD 282
+ +AK+ + SH K + L++ D
Sbjct: 269 AARKSEEAKDTV--SHKSKRVKESLTDDD 295
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 36.7 bits (81), Expect = 0.27
Identities = 59/287 (20%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 348 GSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSD--GDDEI 405
G DK ++S + + + K + L+D + ++ E+ +SV ++ DS D+++
Sbjct: 101 GEFDKGIIRSQRQRQLKLAKKSMYNLSDGEEDVYEDGALGG--SSVKDDFDSGLLSDEDL 158
Query: 406 SLLSLKSFAAQQLLE-NRDILSPINKPDDQEQSNSTKVDTI--KKKRGRPKKIYENKMIN 462
L++ A+++L NR+ + +++ +S ++ I K K GR +K + +
Sbjct: 159 QDDDLEASASKRLKHLNRNREVDASGEEERRKSKKEVMEEIIMKSKLGRMEKAKQKEEKG 218
Query: 463 KSLN-VDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVLLPPIITLNDE 521
K ++ +DKN N ++ L P ++E+N + D P +++LND
Sbjct: 219 KLMDELDKNFKSLVN-----SEAMESLTKPFVAEEN----TRD--------PYLLSLND- 260
Query: 522 DEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQC 581
+S +I + S+ T T +I+ + L L+ K++ + +++ +E
Sbjct: 261 --MSMEIRARP-SERTKTPEEIAQKEREKLEALEEERKKRMQETEELSDGDEEIGGEEST 317
Query: 582 NSSNV-------EPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEIND 621
V + + +PK+ + R NVD ++S E D
Sbjct: 318 KRLTVISGDDLGDSFSVEEDKPKRGWIDDVLEREDNVDNSESDEDED 364
>At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 296
Score = 36.3 bits (80), Expect = 0.36
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 556 SYAPKQLLDNTDITTPLSTP---DNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVD 612
SY ++L+ STP Q++ +N P K K+ ++ ++ + S +
Sbjct: 129 SYGQTRILEILQYVAAQSTPRPQPPQKRGGRANQAPAKPKKAPVPQSEPEEVSLSSSSSS 188
Query: 613 KNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQV 657
+ E N+ + V P+ P+ + T +P N TQ+ + V
Sbjct: 189 SSSENEGNEPTRKVSGPSRPRPTVTSVPAADPKNAGTTQIAQKSV 233
>At2g03140.1 68415.m00267 CAAX amino terminal protease family
protein very low similarity to SP|Q40863 Late
embryogenesis abundant protein EMB8 from Picea glauca;
contains Pfam profile PF02517 CAAX amino terminal
protease family protein
Length = 1805
Score = 35.9 bits (79), Expect = 0.47
Identities = 34/206 (16%), Positives = 79/206 (38%), Gaps = 5/206 (2%)
Query: 577 NQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTST 636
+Q +S +P+ + N+E T ++ D ++ Q P + T
Sbjct: 726 SQRNSDSGKSQPVDNDQDDSPGNHESHTNEKTSAADDSEMASEAKSDSANQGPIGAEAVT 785
Query: 637 TYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQKNCFIETENQISNNDEICML 696
+ E + T + QV T ++++ ++ + F + + + ND
Sbjct: 786 NNDDKVEQGSGVATH--QGQVETSKNDEKGAPIANEKSSVADGFEKASD--AKNDSTNPQ 841
Query: 697 PLNSNNTNIDTSKSDTTKILLESE-KSVNNVTNESCVPNSDEAEQPLVNDTSGRPVRRVI 755
P+ +++ D K D +L + + K + ++E+ ++ + + D G +
Sbjct: 842 PVGADDITSDGDKVDQGVVLAQQQRKDETSKSDENAKQSATDQNKVTSTDNEGDAGKSSA 901
Query: 756 RKPIQYDEESDEDPFANVELSDDDLT 781
+P++ DE +D+ V D T
Sbjct: 902 SQPVEKDESNDQSKETKVMQPVSDQT 927
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 35.9 bits (79), Expect = 0.47
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 517 TLNDEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPD 576
T+ E+E E++N T ES ++ E+ L L+ L + TD+ + + +P+
Sbjct: 1878 TIPTEEESRDQTEEENQEPLTDMESD-KEEGELDLDTLED-----LEEGTDVASMMRSPE 1931
Query: 577 NQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTST 636
+E + P + E +TT +P V+ +++ E D + ++ +P +
Sbjct: 1932 KEEVQPETLATPTQSPSRMETAMEEAETTIETP-VEDDKTDEGGDAAE--EAADIPNNAN 1988
Query: 637 TYSENKEPSNKSETQ-VTESQVITLNDEDENIQSYISEN 674
E E K ET T S V T + S I+ +
Sbjct: 1989 DQQEAPETDIKPETSAATTSPVSTAPTTSSTLASAITSS 2027
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 35.9 bits (79), Expect = 0.47
Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 576 DNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEI-NDGLQIVQSPTVPKT 634
D + + N+SNV P +P + K ++ P + KN +I G+ + V
Sbjct: 761 DLKPEVNNSNVFPSMNGSLQPVGSPFSKGSTALPKIPKNMMVKIPGSGMSSRTTSPVSVK 820
Query: 635 STTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQKNCFIE-TENQISNNDEI 693
ST+ + E + Q+ +S + E ++ S+ Q +E T+ Q+ +
Sbjct: 821 STSPRRSYEVAAAESKQLKDSFNQDMAGLKEQVEQLASKAHQLEEELEKTKRQLKVVTAM 880
Query: 694 CMLPLNSNNTNIDTSKSDTTKILLESEKSVNNVTNESCVPNSDEAEQPLVNDTSGRP-VR 752
N + + +S TT++ +EK + + ++D+ + V TS + +R
Sbjct: 881 AADEAEENRSAKEVIRSLTTQLKEMAEKQSQKDSISTNSKHTDKEKSETVTQTSNQTHIR 940
Query: 753 RVIRKPIQYDEESDEDPFANVELSDDD 779
++ + Q + FAN +D
Sbjct: 941 SMVSQDSQNENNLTSKSFANGHRKQND 967
>At1g28410.1 68414.m03493 expressed protein
Length = 301
Score = 35.9 bits (79), Expect = 0.47
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 1936 FSNRFENPIMNGQHRDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPYLPKKHEYTV 1995
FS++ + I + Q+ + D+ K R L VLE +Q+ + LY K+ E +
Sbjct: 18 FSSQVQQQIGSNQNLIN---DLDSAKLRISQLEAVLEATIQKLDGKTLYL---KEREKLI 71
Query: 1996 FIALTQCQWDLYKHYLLHYGKQTKNSILKDFHILQKI-WSHPQV----LHIFQTKARDEK 2050
+A TQ Y+ G + + K+ W+ + LH+ + KAR+ K
Sbjct: 72 QVAETQILDLQSASYIDKSGLPLVQKRISELEEEVKLLWAALRTTNFELHVLEDKAREAK 131
Query: 2051 AKIKAEKLEDDLAHEDITSEDIKPAETE 2078
K+KA+ LE + E +T + I+ E
Sbjct: 132 NKLKAKALEVEQMTEVVTEQWIQVQHLE 159
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 35.9 bits (79), Expect = 0.47
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 2165 FNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCY 2224
FN E+ + + L+ TRA S + + A+ I+ +S NP+HD++ + ++ +
Sbjct: 626 FNKES--QCCVLLLETRACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIESCSERTK 683
Query: 2225 IYRFVAMGTMEQK 2237
I+R ++ T+E+K
Sbjct: 684 IFRLYSVCTVEEK 696
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 35.9 bits (79), Expect = 0.47
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 2165 FNAENNIKTKLFLISTRAGSLGLNMTAANRVIILDTSWNPAHDIQGIFRVYRFGQRKDCY 2224
FN E+ + + L+ TRA S + + A+ I+ +S NP+HD++ + ++ +
Sbjct: 626 FNKES--QCCVLLLETRACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIESCSERTK 683
Query: 2225 IYRFVAMGTMEQK 2237
I+R ++ T+E+K
Sbjct: 684 IFRLYSVCTVEEK 696
>At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to Chain A,
Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid
Myeloid Leukaemia Protein, Pi(4,5)p2 Complex
(GP:13399999) {Homo sapiens}; supporting cDNA
gi|26451912|dbj|AK118440.1|
Length = 611
Score = 35.5 bits (78), Expect = 0.63
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 598 KNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQV 657
KN +S P ++K ++++ + ++ + TT S +K SNKSE + ++++
Sbjct: 299 KNMAVARSSEYPELEKITQKKLDLMDEFIRDKSALAAQTTKSSSKR-SNKSEEEESKTEY 357
Query: 658 ITLNDEDENIQSYISENEQKNCFIETENQISNND 691
I N ED N + EQK E E + D
Sbjct: 358 IQENQEDLNSIKALPAPEQKEEEEEEEKMETKKD 391
>At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 698
Score = 35.5 bits (78), Expect = 0.63
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 341 MLKKSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSD 400
M ++S+ GSD+ E + D+ P +DED++ + +ER + + SV E
Sbjct: 532 MEEQSVNGSDEDDE-EGDDDFHEPD--------SDEDLSDNNDERNRDEIGSVDEESTKS 582
Query: 401 GD--DEISLLSLKSFAAQQLLENRDILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYEN 458
+ D++++ + + E+RD +S +++ + E S + K D + K N
Sbjct: 583 DEEYDDLAMEDKSYWTDNEEEESRDTISMVSQNNHNEASKTNKDDKYSQNLDLFLKT-TN 641
Query: 459 KMINKSLNVDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVL 511
+ + +SL + SE N + + A + ++ +S + K I+ Q+L
Sbjct: 642 QPLTESLEL---TSEYRNRMGVAASDKAKMRKRSLSIPPVG-KHGSIIDDQIL 690
>At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 717
Score = 35.5 bits (78), Expect = 0.63
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 341 MLKKSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSD 400
M ++S+ GSD+ E + D+ P +DED++ + +ER + + SV E
Sbjct: 551 MEEQSVNGSDEDDE-EGDDDFHEPD--------SDEDLSDNNDERNRDEIGSVDEESTKS 601
Query: 401 GD--DEISLLSLKSFAAQQLLENRDILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYEN 458
+ D++++ + + E+RD +S +++ + E S + K D + K N
Sbjct: 602 DEEYDDLAMEDKSYWTDNEEEESRDTISMVSQNNHNEASKTNKDDKYSQNLDLFLKT-TN 660
Query: 459 KMINKSLNVDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVL 511
+ + +SL + SE N + + A + ++ +S + K I+ Q+L
Sbjct: 661 QPLTESLEL---TSEYRNRMGVAASDKAKMRKRSLSIPPVG-KHGSIIDDQIL 709
>At3g31900.1 68416.m04029 hypothetical protein
Length = 393
Score = 35.5 bits (78), Expect = 0.63
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 1875 IIVCDEGHLLKNDCSVLAVAMSRVATRRRIVLTGTPMQNNLREYFCMVNFVKPNLL 1930
++V G +N+ +SR+ T +++LTG+ QNN++E F +++ P L
Sbjct: 314 VVVFGRGTDPRNEMMSFLKVVSRIKTPHKVLLTGSLYQNNIKEVFNILDVAFPEFL 369
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 35.5 bits (78), Expect = 0.63
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 564 DNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGL 623
++ D+ T +++++ S + E ++ +K EKK T RS ++ E+ D
Sbjct: 190 NSEDVQKESDTSNSEDESASESEESMQADSAAREKYQEKKATKRSVFLESENEAEV-DRT 248
Query: 624 QIVQSPTVPKTSTTYSENKEPSNKSETQV--------TESQVITLNDEDENIQSYISENE 675
+ T ++ E +SETQ TE+ V + D N+ +NE
Sbjct: 249 ETESEDGTDSTDNEIDDSDE-EGESETQCSAEKTGSETEANVEEMR-ADTNVTMEAVQNE 306
Query: 676 QKNCFIETENQI 687
+N E EN+I
Sbjct: 307 SRNQMEELENEI 318
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 35.1 bits (77), Expect = 0.83
Identities = 49/262 (18%), Positives = 99/262 (37%), Gaps = 17/262 (6%)
Query: 438 NSTKVDTIKKKRG----RPKKIYENKMINKSLNVDKNQSEATNHVLLIAQNSTVLKTPII 493
NS+ + KK G R KK + ++ S ++ Q + +L + + + I
Sbjct: 161 NSSSTSSKSKKEGSENVRIKKASDKEIALDSASMSSAQEDHQEEILKVESDHLQVSDHDI 220
Query: 494 SEDNLEFKSSDIVKSQVLLPPIITLNDEDEISTDIEQKNCSKETITESQISDDDEISLMC 553
E E + ++ + ++ N+ E E+ S T S + D +
Sbjct: 221 EEPKYEKEEKEVQEK------VVQANESVE-----EKAESSGPTPVASPVGKDCNAVVAE 269
Query: 554 LKSYAPKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDK 613
L+ K D + T + DN + S E +KKK + + T S+ +
Sbjct: 270 LEEKLIKNEDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVE 329
Query: 614 NQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISE 673
+QE + ++ V + + KE K + + E + + ++E E ++ S
Sbjct: 330 ETTQEKEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEEESA 389
Query: 674 NEQKNCFI--ETENQISNNDEI 693
+K + + E+ + ND I
Sbjct: 390 EGKKKEVVKGKKESPSAYNDVI 411
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 34.7 bits (76), Expect = 1.1
Identities = 85/429 (19%), Positives = 174/429 (40%), Gaps = 38/429 (8%)
Query: 356 QSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDSDGDDEISLLSLKSFAA 415
+S+DE E Q+ ++ + V +E +K + SV E + D + E ++ + A
Sbjct: 155 ESTDEAEV----QQVEPVDVQPVKDAEKAEEKPTVESVVEEETKDRE-ETKIVDVSESAG 209
Query: 416 QQLLENRDILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYENKMINKSLNVDKNQSEAT 475
+ +E+ D+ S D + KV ++ PK K+ ++K + E
Sbjct: 210 DKQVESVDVQSV---RDVSAEIAEEKVKDVEALEVEPKPETSEKV---ETQLEKAR-ELE 262
Query: 476 NHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVLLPPIITLNDEDEISTDIEQKNCSK 535
V ++ T T + LE K D++ + +N +DE +++ CS+
Sbjct: 263 TEVEVVKAEETAEATEQAKVE-LEGKLEDVIVEE----KDSEINSKDEKTSESGSALCSE 317
Query: 536 ETITESQISDDDEISLMCLKSYAPKQLLDN--TDITTPLSTPDNQEQCNSSN-------V 586
E ++ Q S+ D I + P +++ T+ + P N+E+ + S+ V
Sbjct: 318 EILSTIQESNTDPIKETEGDASYPIDVIEKAITEEKHVVDEPANEEKPSESSAALSPEKV 377
Query: 587 EPIKKKRG-RPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYSENKEPS 645
PI + +PK+ E + + ++K I + +V P+ +T++ P
Sbjct: 378 VPINQDSDTKPKEETEGDAAAPADVIEK----AITEEKYVVDEPSKDETTSESGSALCPE 433
Query: 646 NKSET-QVTESQVITLNDEDENIQSYISE---NEQKNCFIE-TENQISNNDEICMLPLNS 700
T Q +++ +ED + + I E E+K+ E ++++ ++ + P
Sbjct: 434 KAVPTNQDLDTEPKKETEEDVSSPADIIEKAITEEKHVVEEPSKDEKTSESGSALSPEKV 493
Query: 701 NNTNIDTSKSDTTKILLESEKSVNNVTNESCVPNSDEAEQPLVNDTSG-RPVRRVIRKPI 759
TN D S ++ K S +V ++ E+PL ++ + V+ K
Sbjct: 494 VPTNQD-SDTEPKKETEGDVPSPADVIEKAITDEKHVVEEPLKDEQENVSEAKDVVTKLA 552
Query: 760 QYDEESDED 768
DE +D
Sbjct: 553 AEDENIKKD 561
Score = 32.7 bits (71), Expect = 4.4
Identities = 22/142 (15%), Positives = 58/142 (40%), Gaps = 5/142 (3%)
Query: 613 KNQSQEINDGLQIVQSPTVPKTSTTYSENK-EPSNKSETQVTESQVITLNDEDENIQSYI 671
K ++++ I++ + +K E +++S + ++ +V+ N + +
Sbjct: 448 KETEEDVSSPADIIEKAITEEKHVVEEPSKDEKTSESGSALSPEKVVPTNQDSDTEPKKE 507
Query: 672 SENEQKNCFIETENQISNNDEICMLPLNSNNTNIDTSKSDTTKILLESEKSVNNVTNESC 731
+E + + E I++ + PL N+ +K TK+ E E N+ ++
Sbjct: 508 TEGDVPSPADVIEKAITDEKHVVEEPLKDEQENVSEAKDVVTKLAAEDE----NIKKDTD 563
Query: 732 VPNSDEAEQPLVNDTSGRPVRR 753
P ++ + + +T V +
Sbjct: 564 TPVAEGKSEETLKETDTESVEK 585
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 34.3 bits (75), Expect = 1.4
Identities = 44/220 (20%), Positives = 82/220 (37%), Gaps = 21/220 (9%)
Query: 576 DNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTS 635
+ +EQ E KKR ++ N +K+Q +E QS
Sbjct: 411 EEKEQKAEKEEESTSKKRQEQEETATDSDDESDSNSEKDQEEE--------QSQLEKARE 462
Query: 636 TTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQKNCFIETENQISNNDEICM 695
++ S + S + T + +L N S +NE+ + +++ +N+E
Sbjct: 463 SSSSSSDSGSERRSIDETNATAQSLKISYSNYSSEEEDNEK----LSSKSSCKSNEESTF 518
Query: 696 LPLNSNNTNIDTSKSDTTKI--LLESEKSVNNVTNESCVPNSDEAEQPLVNDTSGRPVRR 753
+S + D+S++ + +I L +K + N SD + P +TS R
Sbjct: 519 SRYDSGRDHDDSSRNTSMRINSLAHDDKEEDEEENHETRSYSDHDDSP--RNTSMR---- 572
Query: 754 VIRKPIQYDEESDEDPFANVELSDDDLTNGKKNRYYSDDE 793
I D+E +E+ L + + YSDD+
Sbjct: 573 -INSLSHDDDEEEEEENHQTRLEHIHSSKSEDQSVYSDDD 611
>At4g37440.1 68417.m05299 expressed protein
Length = 471
Score = 34.3 bits (75), Expect = 1.4
Identities = 40/202 (19%), Positives = 87/202 (43%), Gaps = 15/202 (7%)
Query: 411 KSFAAQQLLENRDILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYENKMINKSLNVDKN 470
KS A L +N L NK E + S + ++ + G Y +++ L ++
Sbjct: 237 KSLADIALNDNSRNLDKKNKSAKDETAFSEETPPLEFREG---DAYLEQIL---LKIEAA 290
Query: 471 QSEATNHVL----LIAQNSTVLKTPIISEDNLEFKSSDIVKSQVLLPPIITLNDEDEIST 526
+SEA N + ++++N ++ P+ + N ++D+ S P++ + +EDE S
Sbjct: 291 KSEARNLKIRVDKVLSENPSIF--PLANTVN-PLGAADVYTSSEQQKPLLAIKNEDEKSI 347
Query: 527 DIEQKNCSKETITESQIS--DDDEISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQCNSS 584
E+K +++ +S DD+ ++ + A K+ + I Q
Sbjct: 348 ISEEKPVKSASVSSHHVSPEDDETTDILLSEILASKRREGKSIIPDKNLVKTEQASIEEG 407
Query: 585 NVEPIKKKRGRPKKNYEKKTTS 606
P++K+ R ++ K+ ++
Sbjct: 408 PSRPVRKRTPRNREIITKEESN 429
>At2g44430.1 68415.m05525 DNA-binding bromodomain-containing protein
contains Pfam domains, Pfam PF00439: Bromodomain and
PF00249: Myb-like DNA-binding domain
Length = 646
Score = 34.3 bits (75), Expect = 1.4
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 15/232 (6%)
Query: 557 YAPKQLL-DNTDITTPLSTPDNQ--EQCNSSNVEPIKKKRGR--PKKNYEKKTTSRSPNV 611
Y QLL N + PLS+ ++ + + + ++K+ G+ P+ ++ + RS
Sbjct: 370 YRDLQLLFTNAIVFFPLSSSESMAAHELRAVVSQEMRKETGKAGPRLIKQEASGMRSGKA 429
Query: 612 DKNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYI 671
D S + V K + S PS+ S +Q +++ TL++E +NI + +
Sbjct: 430 DAETSDSSLSRQKSSGPLVVCKKRRSVSAKASPSSSSFSQKDDTKEETLSEEKDNIATGV 489
Query: 672 SENEQKN--CFIETENQIS----NNDEICMLPLNSNNTNI---DTSKSDTTKILLESEKS 722
+ + N + N + N + NS+N N DT K++ + + +KS
Sbjct: 490 RSSRRANKVAAVVANNTKTGKGRNKQKQTESKTNSSNDNSSKQDTGKTEKKTVSADKKKS 549
Query: 723 VNNVTNESCVPNSDEAEQPLVNDTSGRPVRRVIRKPIQYDEESDEDPFANVE 774
V + + NS + E N + G + KP + S A VE
Sbjct: 550 VADFL-KRLKKNSPQKEAKDQNKSGGNVKKDSKTKPRELRSSSVGKKKAEVE 600
>At1g74860.1 68414.m08676 expressed protein
Length = 400
Score = 34.3 bits (75), Expect = 1.4
Identities = 22/91 (24%), Positives = 37/91 (40%)
Query: 3266 HTTSASTSKLPLSKSVTIVSKPSNIALHKKTICLIAPKMMTIKTVNDNKKRPSILTKVKP 3325
HT +S + LS SV + + LH+ + C I + + S+ P
Sbjct: 212 HTVDSSMANGVLSSSVEVGDVNDGVCLHEVSSCKIVESLEMSGCADATDSISSVKDGEAP 271
Query: 3326 VLATKLVMKDVKTKKRTIPSPPQQPAKKRKV 3356
+++ KDV T SPP++ RK+
Sbjct: 272 IVSPNSSQKDVGTLISLKTSPPREHENDRKL 302
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 34.3 bits (75), Expect = 1.4
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 648 SETQVTESQVITLNDEDENIQSYISENEQ--KNCFIETENQISNNDEICMLPLNSNNTNI 705
SE QV E Q+ +N EN ++ I+ NE+ K CF E I + L ++ T
Sbjct: 189 SEKQVMEKQLHQVNASVENFKARIAHNEEQMKGCFSEAYKLIQEDRH---LVISLETTKW 245
Query: 706 DTSKSDTTKILLESEKSVNNVTNESCVPNSDEAEQPLVNDTSGRPVRRVIRKPIQYDEES 765
+ + +D L+S S + E +D+ + L D R +++ + ++ ++E
Sbjct: 246 EVADADKEFRWLKSAVSSSEKEYEQISRRTDDIKLEL--DDERREKKKLEEELMELNKEL 303
Query: 766 DEDPFANVELSDDDLTNGKKN 786
+E +VE + L KN
Sbjct: 304 EELGSESVEAAIVRLQEEVKN 324
>At5g46760.1 68418.m05760 basic helix-loop-helix (bHLH) family
protein
Length = 592
Score = 33.9 bits (74), Expect = 1.9
Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 11/196 (5%)
Query: 614 NQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISE 673
N Q ND + PT + N ++ S ++ Q+ L D I S ++
Sbjct: 256 NPDQGENDPALWISEPTNTGIESPARVNNGNNSNSNSKSDSHQISKLEKND--ISSVENQ 313
Query: 674 NEQKNCFIETE-----NQISNNDEICMLPLNSNNTNIDTSK-SDTTKILLESEKSVNNVT 727
N Q +C +E + + +N+ + S+ SK S+ + +L V +
Sbjct: 314 NRQSSCLVEKDLTFQGGLLKSNETLSFCGNESSKKRTSVSKGSNNDEGMLSFSTVVRSAA 373
Query: 728 NESCVPNSDEAEQPLVNDTSGRPVRRVIRKPIQYDEESDEDPFANVELSDDDLTNGKKNR 787
N+S +SD + P + RK + E+P +VE ++ R
Sbjct: 374 NDS--DHSDLEASVVKEAIVVEPPEKKPRKRGRKPANGREEPLNHVE-AERQRREKLNQR 430
Query: 788 YYSDDECIPHGTKKRK 803
+YS +P+ +K K
Sbjct: 431 FYSLRAVVPNVSKMDK 446
>At5g36740.1 68418.m04402 PHD finger family protein
Length = 1179
Score = 33.9 bits (74), Expect = 1.9
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 547 DEISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKK 598
+E+ C+KS P+++ + D + + ++ + E +++KRGRP+K
Sbjct: 101 EEVKQECVKSLVPEEIRGD-DFRSEVKVESKDDRSDDGKEEKVQRKRGRPRK 151
>At5g36670.1 68418.m04388 PHD finger family protein
Length = 1193
Score = 33.9 bits (74), Expect = 1.9
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 547 DEISLMCLKSYAPKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKK 598
+E+ C+KS P+++ + D + + ++ + E +++KRGRP+K
Sbjct: 101 EEVKQECVKSLVPEEIRGD-DFRSEVKVESKDDRSDDGKEEKVQRKRGRPRK 151
>At4g29060.1 68417.m04157 elongation factor Ts family protein similar
to SP|P35019 Elongation factor Ts (EF-Ts) {Galdieria
sulphuraria}; contains Pfam profiles PF00627: UBA/TS-N
domain, PF00889: Elongation factor TS, PF00575: S1 RNA
binding domain
Length = 953
Score = 33.9 bits (74), Expect = 1.9
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 1447 DKTECIEEEPEHISVPKRPGPKSKTVPESKAEKSIMLTADKVMNKELNLLNTPAVIQEEP 1506
DK E E+P + P P ++ +V ++ E+S+ + A+ V ++E+ TP V++EE
Sbjct: 356 DKREEEAEKPP-VETPVEPEAEA-SVTSAEVEESVCVPAE-VTSEEVPSSETPKVVEEEV 412
Query: 1507 IATTRK--GPVTRXXXXXXXXXXXXQRGVATKEDSSSEEE 1544
IAT + P + V ++ SEEE
Sbjct: 413 IATKAEDDSPEKEEQTETLAAAAEAEEVVPPIPETKSEEE 452
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 33.9 bits (74), Expect = 1.9
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 3036 PADCICLDSDDDEGPAPPHPVSISYTPPV--PAPQRSDGPP 3074
P CIC+ + GP PP P TPP PAP +D PP
Sbjct: 33 PPPCICICNP---GPPPPQPDPQPPTPPTFQPAPPANDQPP 70
>At3g28350.1 68416.m03543 hypothetical protein
Length = 290
Score = 33.9 bits (74), Expect = 1.9
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 1031 KSFLLFKLAKHNLTQMEEDLATQYNTFLKEQNLSWVREEEKEITASTKVSDDSDCEIVEE 1090
K F+LF + + E+L + F K + S E+ ITA+ K +D + +E
Sbjct: 86 KLFILFVIYRDQFISQMEELNKEIREFQKTVDSSLADEDSTGITANIKAFEDCSGDDLEA 145
Query: 1091 IVQPTKEGKDHLNSEVDTFTRKMREKIRQNQKKNVFSESESDIPL 1135
I + L E + + + E+ Q Q + F E E + L
Sbjct: 146 IKNLLSDVHSQLAKEEEGY---LAEQKMQEQLQKEFDEYEKKMSL 187
>At2g21540.1 68415.m02563 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; contains Pfam PF00650 :
CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO,
N-terminus
Length = 548
Score = 33.9 bits (74), Expect = 1.9
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 988 LSNIVNTTVELGQLMTQKSEDFIKRKINVENVTDTLKMDYCVKKSFLLFKLAKHNLTQME 1047
LSNI T+ + + T KS+ F K K + EN +D V S L K N + E
Sbjct: 344 LSNIEEKTISVDENTTMKSDSFAKNKFDAENTKFIPMIDKTVNASTWPTNLHKSNYPEPE 403
Query: 1048 E 1048
+
Sbjct: 404 D 404
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 33.9 bits (74), Expect = 1.9
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 986 EFLSNIVNTTVELGQLMTQKSEDFIKRKINVENVTDTLKMDYCVKKSFLLFKLAKHNLTQ 1045
E +SN + + L +K+ED + + +VE + L M+ K L A H Q
Sbjct: 299 EMVSNEYESLLTEKDLAAKKAEDSVLKAKDVEKQMEGLTMEVIATKQLLELAHATHLEAQ 358
Query: 1046 ---MEEDLATQYNTFLKEQNLSWVREEEKEITASTKVSDD 1082
++ +A + + +E+ L V +E K +DD
Sbjct: 359 EKKLDAAMARDQDVYNQEKELKMVEDEIKRFRQDIDAADD 398
>At5g60130.1 68418.m07538 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 300
Score = 33.5 bits (73), Expect = 2.5
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 338 HNTMLKKSITGSDDKFELQ-SSDEPEAPVIKSQIITL----NDEDVNMSENERKKSHLN- 391
H TM KK SD E++ SD E +++L +D D N E+ + +
Sbjct: 83 HRTMCKKIRRSSDQSEEIKVESDSDEQNQASDDVLSLDEDDDDSDYNCGEDNDSDDYADE 142
Query: 392 SVTENQDSDGDDE 404
+ E D+D DDE
Sbjct: 143 AAVEKDDNDADDE 155
>At4g31520.1 68417.m04476 SDA1 family protein contains Pfam profile
PF05285: SDA1
Length = 698
Score = 33.5 bits (73), Expect = 2.5
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 595 RPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNK-SETQVT 653
RPKK E S PNVD Q + +D + + S + + T E +E SN + T
Sbjct: 422 RPKKYGEVNVFSNVPNVDLLQESD-DDEVALPGSDDIEQELITEDEAEEDSNDGDDMNNT 480
Query: 654 ESQVITLNDEDE 665
E + DE+E
Sbjct: 481 EDDTLVSGDEEE 492
>At3g27260.1 68416.m03407 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 813
Score = 33.5 bits (73), Expect = 2.5
Identities = 32/165 (19%), Positives = 63/165 (38%), Gaps = 3/165 (1%)
Query: 2551 DTEPAYTEPAHTNPTRKTEQKSGKK--IKMTTTIDMEPANSARDNIEMHRSSTVEREPVN 2608
+ E A A R+ E+++ ++ +KM T+++ + +++EM SS E+ P +
Sbjct: 601 EAEAAAEAAAEAKRKRELEREAARQALLKMEKTVEINENSRFLEDLEMLSSSAPEQLPSS 660
Query: 2609 TVANIPTAPPKDAEVVDL-DSEPQNDTPDVIVDSDEGVEVNSVISNRPKRTTTSEXXXXX 2667
P P +L S P + D+ E + +P T+T
Sbjct: 661 AEETSPERPLDALGSFNLRGSNPLEQLGLYMKQDDDEEEPEAPAVPKPDETSTERPLDAL 720
Query: 2668 XXXXXXXXETDNDTYSILIENDSELAKDPQHGAPRSHDTSAERPI 2712
+ ++D E + P+ ++TS ERP+
Sbjct: 721 GSFKLGECNPLEQLGLYMKQDDGEEEEPEAPVVPKPNETSLERPV 765
>At1g06920.1 68414.m00735 ovate family protein 58% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 315
Score = 33.5 bits (73), Expect = 2.5
Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
Query: 518 LNDEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPDN 577
++ ED+I D+ ++ K+T E I+ D C S K+ ++ +S
Sbjct: 128 ISSEDDIIIDMNNRDFKKKTFKE--ITKFDSTEKACRASNRTKETHIPHHLSVKVSKEKE 185
Query: 578 QEQ---CNSSNVEP---IKKKRGRPKKNYEKKTTSRSP--NVDKNQSQEINDGLQIVQSP 629
E+ C + + R K+ K +RSP V +S+ + QI+ S
Sbjct: 186 DEEEDACRTKKKHQKTLVSSGRRSSAKSPRIKLRARSPRIQVSPRRSKSRSQNKQILDSF 245
Query: 630 TVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQK 677
V K+S +K+ + E+ + T ND ++ + Y++ N ++
Sbjct: 246 AVIKSS--IDPSKDFRESMVEMIAENNIRTSNDMEDLLVCYLTLNPKE 291
>At5g28940.1 68418.m03581 hypothetical protein
Length = 485
Score = 33.1 bits (72), Expect = 3.3
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 323 DKNQSEVIIDDLPILHNTMLKKSITGSDDKFELQSSDE--PEAPVIKSQIITLNDEDVNM 380
D + SE + L N K +T + + E+ SD P++ V ++ NDE V
Sbjct: 399 DADDSERASNHSHTLSNIEAMKLLTRTSEVSEMLVSDTATPKSRVKLEKLDEKNDEMVGN 458
Query: 381 SENERKKSHLNSVTENQDSD 400
E+E+K N V EN + D
Sbjct: 459 EEDEKKSGVNNEVNENPEPD 478
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 33.1 bits (72), Expect = 3.3
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 564 DNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGL 623
D+ D ++ + P + CNS+ E + + K S++ DK++ +E N+
Sbjct: 227 DDIDTSSEEAKPKVLKSCNSNADEVAENSSDEDEPKVLKTNNSKA---DKDEDEEENETS 283
Query: 624 QIVQSPTVPKTSTTYSENKE-PSNKSETQVTESQVITLNDEDENIQSYISENE 675
P K S + S+N E S+ E ++T S++ + + +NE
Sbjct: 284 DDEAEPKALKLSNSNSDNGENNSSDDEKEITISKITSKKIKSNTADEENGDNE 336
>At3g61830.1 68416.m06941 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profile: PF02309 AUX/IAA family
Length = 602
Score = 33.1 bits (72), Expect = 3.3
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 569 TTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQE-INDGLQIVQ 627
T+P+STP Q Q K KR RP + K S QSQ+ IN L++ Q
Sbjct: 359 TSPISTPAQQPQS--------KCKRSRPIEPSVKTPAPPSFLYSLPQSQDSINASLKLFQ 410
Query: 628 SPTVPKTSTTYSENKEPSNKSET 650
P++ + S YS N S K ET
Sbjct: 411 DPSLERISGGYSSNN--SFKPET 431
>At3g18750.1 68416.m02380 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 567
Score = 33.1 bits (72), Expect = 3.3
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 1068 EEEKEITASTKVSDDSDCEIVEEIVQPTK-EGKDHLNSEVDTFTRKMREKIRQ--NQKKN 1124
EE+K+ +TK D S + VEE +P E ++ L E++ K +E +++ +++
Sbjct: 493 EEDKQCVDATKGEDKSSIQEVEEATEPVSLEEEERLRQELEEIEAKYQEDMKEIATKREE 552
Query: 1125 VFSESESDIPL 1135
E++ + L
Sbjct: 553 AIMETKKKLSL 563
>At2g42860.1 68415.m05307 expressed protein
Length = 224
Score = 33.1 bits (72), Expect = 3.3
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 865 DTNECLESSINQFHDDNDNNETLCELKSSSATDE 898
DT+ E + FH ND+NE L KSSSA+DE
Sbjct: 112 DTSAETEQTNEMFHSLNDSNEILEGTKSSSASDE 145
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 33.1 bits (72), Expect = 3.3
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 2324 ERAAAWMQFQQEHAHKQMQNELAANNTRISSKLQG-HEYAKSPVPQPSPRKDEAPKTKRG 2382
E A + ++H K + E + + S K + E KSP P PSP+K + K K+
Sbjct: 28 ELAVREKKISKKHKSKSKEEEKPEKSKKKSKKYEEVEEEEKSPSPSPSPKKSKESK-KKH 86
Query: 2383 KKNS 2386
K++S
Sbjct: 87 KRSS 90
>At2g16470.1 68415.m01887 zinc finger (CCCH-type) family protein / GYF
domain-containing protein contains Pfam domains PF00642:
Zinc finger C-x8-C-x5-C-x3-H type (and similar), PF02213:
GYF domain
Length = 659
Score = 33.1 bits (72), Expect = 3.3
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1068 EEEKEITASTKVSDDSDCEIVEEIVQPTKEGKDHLNSEVDTFTRKMREKIRQNQKKNVFS 1127
EE EI A K+ D DCE +E + KE + L +F R+ R+ I + +K FS
Sbjct: 25 EEIPEIHADPKM--DPDCESEDEDEKEEKEKEKQLRPRSSSFNRRGRDPI--SPRKGGFS 80
Query: 1128 ESES 1131
+ES
Sbjct: 81 SNES 84
>At1g65710.1 68414.m07458 expressed protein ; expression supported
by MPSS
Length = 455
Score = 33.1 bits (72), Expect = 3.3
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 179 KPSSPPQTYLQEDILSTNMLSNQTEDEESLEINKNHHNRPSKDKIFETNQTTTSEADSTN 238
KP P L+E+ + NQ E+EE + + K H R + E ++ T S+ DS
Sbjct: 24 KPMEPVIEPLEEEAKPKSEKLNQEEEEEEVVVIK--HTRSHE----ERSKKTESDKDSPV 77
Query: 239 NIEMSAECTNSSNDLKMKICPK 260
+ ++AE +NS+ +++ C K
Sbjct: 78 SSPVAAEKSNSTPLVRISSCTK 99
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 33.1 bits (72), Expect = 3.3
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 2527 KAAIAAERHLDMIVPNLLDDDSDLD--TEPAYTE---PAHTNPTRK---------TEQKS 2572
KA + E + + N DDDS +D T P + E P + + + ++S
Sbjct: 120 KAGVETEHSDESVEQNDNDDDSCMDEPTTPEHVEIETPTFVTDSEQQLVHADLMISAEES 179
Query: 2573 GKKIKMTTTIDMEPANSARDNIEMHRSSTVEREPVNTVA-NIPTAPPKDAEVVDLDSEPQ 2631
K+++ T+DM P + RD+ E +E E V +P + +++ E +
Sbjct: 180 SSKLEVDDTVDMIPLTTCRDDDEDSMDGLIENEDVTVQGPRVPAFVVHVSRPAEVE-ETR 238
Query: 2632 NDTPDVIVDSD 2642
D P V+++ +
Sbjct: 239 KDLPIVMMEQE 249
>At1g13260.1 68414.m01539 DNA-binding protein RAV1 (RAV1) identical to
SP|Q9ZWM9 DNA-binding protein RAV1 {Arabidopsis
thaliana}, RAV1 GI:3868857 from [Arabidopsis thaliana]
Length = 344
Score = 33.1 bits (72), Expect = 3.3
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 3242 PADNRTVINLTELGPVSSVTAPSKHTTSASTSKLPLSKSVTIVSKPS 3288
PA +V NL +G SSV S++ A + KLP SK +V +P+
Sbjct: 24 PAKKSSVGNLYRMGSGSSVVLDSENGVEAESRKLPSSKYKGVVPQPN 70
>At5g58370.2 68418.m07309 expressed protein
Length = 465
Score = 32.7 bits (71), Expect = 4.4
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 408 LSLKSFAAQQLLENRDILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYENKMINK 463
L L SF++ + + S + DD S T V ++KKKR P K N +N+
Sbjct: 15 LKLSSFSSNSSYKGKS-RSITQRSDDDTNSRKTTVSSMKKKRVYPNKAKHNNHVNE 69
>At5g58370.1 68418.m07308 expressed protein
Length = 446
Score = 32.7 bits (71), Expect = 4.4
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 408 LSLKSFAAQQLLENRDILSPINKPDDQEQSNSTKVDTIKKKRGRPKKIYENKMINK 463
L L SF++ + + S + DD S T V ++KKKR P K N +N+
Sbjct: 15 LKLSSFSSNSSYKGKS-RSITQRSDDDTNSRKTTVSSMKKKRVYPNKAKHNNHVNE 69
>At5g47940.1 68418.m05922 expressed protein
Length = 749
Score = 32.7 bits (71), Expect = 4.4
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 741 PLVNDTSGRPVRRVIRKPI--QYDEESDEDPFANVELSDDDLTNGKKNRYY 789
PL +PV+ +I + + + + ED + V+ SDD L N +K +Y
Sbjct: 125 PLTESADSKPVKDLIERKVADNGNGRTSEDDWVEVKASDDSLLNNEKQDFY 175
>At5g05510.1 68418.m00598 protein kinase-related low similarity to
SP|O60566 Mitotic checkpoint serine/threonine-protein
kinase BUB1 beta (EC 2.7.1.-) {Homo sapiens}
Length = 471
Score = 32.7 bits (71), Expect = 4.4
Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
Query: 84 QQVGNLKNSGSSKTLNTFINKAVESDIQVGSRRLSKADSTIGGSTVQESQTVLNYCNKSN 143
Q+ N +N G + + F+++ +E + G+ +K +T GS + + + + N
Sbjct: 239 QRSQNKENQGCNNSFEVFLDENLECE--TGTSGKAKTSTTQCGSQPNQESFEI-FIDDEN 295
Query: 144 QQITESENVICDKNRSVIVGKKRGRKPKQKIMGTRKPSSPPQTYLQEDILSTNMLSNQTE 203
T EN + ++ + R P+ R ++PP+ +ED + + +
Sbjct: 296 TDETADEND--EAGKAFVFLLPRDHSPESSEEADR--NTPPRARFREDTVVRRFVGSTIS 351
Query: 204 DEESLEINKNHH 215
DE N HH
Sbjct: 352 DEPEAVENACHH 363
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 32.7 bits (71), Expect = 4.4
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 11/158 (6%)
Query: 610 NVDKNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQS 669
N + ++G QS + PK S + +NK + K E+ D +QS
Sbjct: 649 NASLREEDSKDNGRSAAQSSSQPKESQSSKKNKGKAVKV-VDPKETLADNFMDTVRRLQS 707
Query: 670 YISENEQKNCFIETENQISNNDE--ICMLPLNSNNTNIDTSKSDTTKI--------LLES 719
+ E++ I + +D+ ++ +S++T + T+K + +
Sbjct: 708 SQNPQEEEEEAISKDKNTYRSDKGKSQVVGTDSSSTGSKQQRKKTSKFHRVRLGDGSMAA 767
Query: 720 EKSVNNVTNESCVPNSDEAEQPLVNDTSGRPVRRVIRK 757
+NN T ES + D N T G PVR V RK
Sbjct: 768 LLDLNNSTRESEQESKDSNSNSNQNQTGGLPVRGVWRK 805
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 32.7 bits (71), Expect = 4.4
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 339 NTMLKKSITGSDDKFELQSSDEPEAPVIKSQIITLNDE----DVNMSENERKKSHLNSVT 394
+TM K + FEL++ + E +S++ L DE + ER+K HL S
Sbjct: 227 STMQKLHELAQNQLFELRAQSDEETAGKQSEVSLLMDEVERAQTRLLTLEREKGHLRSQL 286
Query: 395 ENQDSDGDDEIS-LLSLKSFAAQQLLENRDILSPIN 429
+ + D D++ S + S L I+S +N
Sbjct: 287 QTANEDTDNKKSDNIDSNSMLENSLTAKEKIISELN 322
>At1g67370.1 68414.m07669 meiotic asynaptic mutant 1 (ASY1)
identical to meiotic asynaptic mutant 1 [Arabidopsis
thaliana] GI:7939627; contains Pfam profiles PF02301:
DNA-binding HORMA domain, PF04433: SWIRM domain
Length = 596
Score = 32.7 bits (71), Expect = 4.4
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 11/70 (15%)
Query: 366 IKSQIITLNDEDVNMSENERKKSHLNSVTENQDSDGDDEISLLSLKSFAAQQLLENRDIL 425
+KS + DE+ +M +++ K +SV ++Q SD D EIS Q EN+ I+
Sbjct: 228 VKSVLDPCEDENDDM-QDDGKSIGPDSVHDDQPSDSDSEIS----------QTQENQFIV 276
Query: 426 SPINKPDDQE 435
+P+ K DD +
Sbjct: 277 APVEKQDDDD 286
>At1g43770.1 68414.m05040 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 371
Score = 32.7 bits (71), Expect = 4.4
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 589 IKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNKS 648
+++ + KK +KK+ + SP V + E+ +V+ V +S T E E +
Sbjct: 155 LERSEKKKKKKKKKKSINHSPPVLAVEDHELQGTTNVVEPVEVSSSSPT-KETMESKRQE 213
Query: 649 ETQVTESQVITLNDEDENIQSYISENEQKNCFIETENQISNNDEI 693
+ + +T D + S E +C ++ S N +I
Sbjct: 214 SSDSRKPHELTCLVGDSETANSSSVPEHNSCAVKKRKLSSGNKQI 258
>At1g06760.1 68414.m00718 histone H1, putative similar to histone H1-1
GB:CAA44312 GI:16314 from [Arabidopsis thaliana];
identical to cDNA H1-1C mRNA for histone H1-1 (partial)
GI:732560
Length = 274
Score = 32.7 bits (71), Expect = 4.4
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Query: 3180 AHDAHPLSKPEPSHKAANRLQTVKLLPVK-KLRAQIDAP--IASSSKTC---EWNAQPKA 3233
A + P + E S A + TV + K K+ A A IA KT + A+ KA
Sbjct: 133 AKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKA 192
Query: 3234 KRAPKSNRPADNRTVINLTELGPVSSVTAPSKHTTSASTSKLPLSKSVTIVSKPSNIALH 3293
K P++ A R ++ + P+K +A + P K+V K + +A
Sbjct: 193 KPVPRATAAATKRKAVDAKP----KAKARPAKAAKTAKVTS-PAKKAVAATKKVATVATK 247
Query: 3294 KKTICLIAPKMMTIKTVNDNKKRPSILTK 3322
KKT K++ KTV KR S K
Sbjct: 248 KKT---PVKKVVKPKTVKSPAKRASSRVK 273
>At1g04300.1 68414.m00421 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471;contains Pfam PF00917: Meprin And
TRAF-Homology (MATH) domain
Length = 1052
Score = 32.7 bits (71), Expect = 4.4
Identities = 64/332 (19%), Positives = 128/332 (38%), Gaps = 28/332 (8%)
Query: 432 DDQEQSNSTKVDTIKKKRGRPKKIYENKMINKSLNVDKNQSEATNHVLLIAQNSTVLKTP 491
+ ++++ + KK + + K NK K ++ S AT H + +N +
Sbjct: 409 ETEQRAKRGAAEREKKSKKKQAKQKRNKNKGKDKRKEEKVSFAT-HAKDLEENQNQNQND 467
Query: 492 IISEDNLEFKSSDIVKSQVLLPPIITLNDEDEISTDIEQKNCSKETITESQISDDDEISL 551
+D++ K+ + L + ++D + S DI Q + ++ + S + D D + +
Sbjct: 468 EEEKDSVTEKAQSSAEKPDTLGDVSDISDSVDGSADILQPDL-EDRDSSSVLWDTDALEI 526
Query: 552 MCLKSYAPKQLLDNTDITTPLSTPDNQEQC----NSSNVEPIKKKRGRPKKNYEKKTTS- 606
S + I+TP + + +SS + G +Y+ + +
Sbjct: 527 HPPSSEGSSRGR-GISISTPNGITEGKSHSTMDDSSSTCSNDSIRSGVTNGSYQGNSLNF 585
Query: 607 ---RSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDE 663
+SPN KNQ + + S T + ST ++ K + SE + +
Sbjct: 586 RNQKSPNKGKNQQVKAMTDAHSLASETDDQPSTLGTDPKGQNYSSEAS-------NVGES 638
Query: 664 DENIQSYISENEQKNCFIETENQISNNDEICMLPLNSNNTNIDTSKSDTTKILLESEKSV 723
D + S+I E E + N+I E + N+ ++D K +T +L S
Sbjct: 639 DWVVVSHIQEPE------GSRNRIPVGRERKTVQSIVNSVDMDRPKEKSTAVL----SSP 688
Query: 724 NNVTNESCVPNSDEAEQPLVNDTSGRPVRRVI 755
NV + E+ ++ G P R+V+
Sbjct: 689 RNVAKNPSPLTQTKPEKKSISTADGIPNRKVL 720
>At4g39870.1 68417.m05649 expressed protein hypothetical protein,
Schizosaccharomyces cerevisae, Z99168
Length = 394
Score = 32.3 bits (70), Expect = 5.8
Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Query: 555 KSYAPKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPN--VD 612
KS+ K + TD+T L P + + ++ P+ + K+N + TT+ P VD
Sbjct: 5 KSFRSKAVHFVTDLTAGLLNPISDKPSSAHPPPPLPDEEDESKRNQLESTTAEQPKDLVD 64
Query: 613 KNQSQEINDGL-QIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDEN 666
+ + + L ++ S K E++E + E + +E++ + N
Sbjct: 65 EPDTSSFSAFLGSLLSSDPKDKRKDQDPEDEEDEEEDEEEDSEAETSDTSSSSAN 119
>At4g25730.1 68417.m03703 FtsJ-like methyltransferase family protein
contains Pfam profile: PF01728 FtsJ-like
methyltransferase
Length = 821
Score = 32.3 bits (70), Expect = 5.8
Identities = 48/254 (18%), Positives = 107/254 (42%), Gaps = 15/254 (5%)
Query: 374 NDEDVNM----SENERKKSHLNSVTENQDSDGDDEISLLSLKSFAAQQLLENRDILSPIN 429
NDED N SENE + +++ D D D+E + + + R ++
Sbjct: 419 NDEDDNGNAVDSENEDHGEGASDDSKDSDRDSDEERQKYTEQMEEIFEQAYERYMVKKEG 478
Query: 430 KPDDQEQSNSTKVDTIKKKRGRPKKIYENKMINKSLNVDKNQSEATNHVLLIAQNSTVLK 489
++++ + +++ G E I+ ++++ + EA + L++ + V++
Sbjct: 479 SAKQRKRARQAHAEKLEEGDGD-----EEMKIDYDSDMNEEKDEA--NPLVVPLDDGVVQ 531
Query: 490 TPIISEDNLEFKSSDIVKSQVLLPPIITLNDEDEISTDIEQKNCSKETITESQISDDDEI 549
T E + ++ S +I V + + EDEI+ + KN SK ++ + S +
Sbjct: 532 TK--EEISNQWFSQNIFAEAVEEGDLGKDDSEDEIANKKKSKNLSKPDKSKQKASKASVL 589
Query: 550 SLMCLKSYAPKQLLDNTDITTPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSP 609
S L + + K+ D ++ +T + + + +V + KK KK +
Sbjct: 590 SDQSLPNSSKKE--DEFEVVPAPATDSDSDSSSEDDVHTKAEILACAKKMLRKKQREQML 647
Query: 610 NVDKNQSQEINDGL 623
+ N+ +++GL
Sbjct: 648 DDAYNKHMFVDEGL 661
>At4g23220.1 68417.m03349 protein kinase family protein contains Pfam
PF00069: Protein kinase domain
Length = 542
Score = 32.3 bits (70), Expect = 5.8
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 1950 RDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPYLPKKH-EYTVFIALTQCQWDLYK 2008
R+ + E + + K L K+L CL+ +E ++Y ++P K +Y +F Q Q D K
Sbjct: 259 REFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTK 318
Query: 2009 HY 2010
Y
Sbjct: 319 RY 320
>At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max}; similar to polyphosphoinositide binding
protein Ssh2, Glycine max, gb:T05953; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 668
Score = 32.3 bits (70), Expect = 5.8
Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 6/140 (4%)
Query: 1175 DSTQQFQDNNESSQEPTEIDSFIGFSANELNETTEFQKYLKYLYDKLIPNIADEKKLGTS 1234
DS Q + E+ E+ + + + +E T ++ +K + + ++A++ +
Sbjct: 85 DSEQTHEVTPETETAKLEVLNHTAEDSEQTHEVTPEKETVK---SEFLNHVAEDSEQTHE 141
Query: 1235 VITQIENKRSSVTQI---ESEQPNDRPETPLINYEDPAEEVQCEPSLHIFNDFMEDFQKT 1291
V + E +S V +SEQP TP + + N ED+ +T
Sbjct: 142 VTPETETVKSEVLNHAAEDSEQPRGVTPTPETETSEADTSLLVTSETEEPNHAAEDYSET 201
Query: 1292 NDNNPDMLNSACKYTERNGW 1311
+ ML KY E W
Sbjct: 202 EPSQKLMLEQRRKYMEVEDW 221
>At3g12720.1 68416.m01589 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 307
Score = 32.3 bits (70), Expect = 5.8
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 582 NSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTTYSEN 641
++ N+ P K+ N K +++ ++ KN + + P TST ++
Sbjct: 134 STHNLMPSHKRSSSSNNNNIPKP-NKTTSIMKNPTDLDQSTTAFSITNINPPTSTKPNKL 192
Query: 642 KEPSNKSETQVTESQVITLNDEDENIQSYISENEQKNCFIETENQISNNDEI 693
K P+ +T + VI +ND + Q+ I N+ + ++ EN I + ++
Sbjct: 193 KSPN---QTTIPSQTVIPINDNMSSTQTMIPINDPMSSLLDDENMIPHWSDV 241
>At2g12875.1 68415.m01402 hypothetical protein
Length = 325
Score = 32.3 bits (70), Expect = 5.8
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 573 STPDNQEQCNSSNVEPIKKKRGRP---KKNYEKKTTSRSPNVDKNQSQEINDGLQI--VQ 627
S D QE+ E +K+ G + + + TT + ++ S E N ++ +
Sbjct: 123 SEKDEQEKSEEEESEEEEKEEGNDDGEESSNDSTTTEEPSSTEEPSSSEQNKAIEGGGTE 182
Query: 628 SPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQKNCFIETENQI 687
P + T + +E S K+E + +E DE+E + SE E+K + E +
Sbjct: 183 EPILALTPVLEAVEEEKSYKNEEEKSE------KDEEEKSEEEESEEEEKEEEEKEEEKE 236
Query: 688 SNND 691
ND
Sbjct: 237 EGND 240
>At1g79270.1 68414.m09241 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 528
Score = 32.3 bits (70), Expect = 5.8
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 457 ENKMINKSLNVDKNQSEATNHVLLIAQNSTVLKTPIISE-DNLEFKSSDIVKSQVLLPPI 515
ENK + S + + + N VL I +N KT I+ + D E + +V+ ++ PP+
Sbjct: 437 ENKPVTNSRDTQEVRLPQGNEVLNIFKNYAA-KTSILDDFDFYENREKVMVQKKLRFPPV 495
Query: 516 ITLNDEDEIS--TDIEQKNCSKETITE 540
+ +ED ++ +E N +E TE
Sbjct: 496 LKKKEEDLVADFKTMEMSNTVEEGNTE 522
>At4g24200.1 68417.m03474 expressed protein hypothetical protein -
Arabidopsis thaliana,PIR2:T06677
Length = 1000
Score = 31.9 bits (69), Expect = 7.7
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 377 DVNMSENERKKSHLNSVTENQDSDGDDEISLLSLKSFAAQQLLENRDILSPINKPDDQEQ 436
DV+++ N ++ S L +T+NQDSD +S + E+ ++ + +
Sbjct: 378 DVSVAHNSKQVSSLTHMTDNQDSDNSSRLS----GGLGRSRKFESDNLTGLADNEGKDDM 433
Query: 437 SNSTKVDTIKKKRGR 451
+S K +K+++ R
Sbjct: 434 GHSDKKRRVKRRKKR 448
>At4g23190.1 68417.m03345 protein kinase family protein contains Pfam
PF00069: Protein kinase domain
Length = 667
Score = 31.9 bits (69), Expect = 7.7
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1950 RDSRQEDIRLMKARTHILHKVLEGCLQRQEASVLYPYLPKKH-EYTVFIALTQCQWDLYK 2008
R+ R E + + K + L ++L CL+R+E ++Y ++ K +Y +F Q Q D +
Sbjct: 389 REFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLDWTR 448
Query: 2009 HY 2010
Y
Sbjct: 449 RY 450
>At4g17000.1 68417.m02564 hypothetical protein
Length = 674
Score = 31.9 bits (69), Expect = 7.7
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Query: 1160 STNKVPEVEIQCNNVDSTQQFQDNNES-SQEPTEIDSF--IGFSANELNETTEFQ-KYLK 1215
+T K P+ + + S + F N + +P + SF I S + L + + + K +
Sbjct: 525 NTEKKPQCTLAKEDTASIRGFHGENLGPNHQPVRVSSFCSILMSVHRLEKNSASRLKASR 584
Query: 1216 YLYDKLIP-NIADEKKLGTSVITQIENKRSSVTQIESEQPNDRPETPLIN 1264
KL+ N+ D K++ Q+ NKR + S+ E P+IN
Sbjct: 585 GTSTKLVSENMVDCKRVALGRKKQVANKRIETAEQASQMNGGSKEVPIIN 634
>At4g13970.1 68417.m02161 expressed protein
Length = 663
Score = 31.9 bits (69), Expect = 7.7
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1312 QCYPINVKDTKLYQQTQIILDKLPESFVNVYFQYQEIASKDN 1353
+C +N +D++ YQ+ ++DKL V+ YF E + KDN
Sbjct: 417 KCRLLNERDSEAYQRADWLVDKLGTK-VHSYFWLDEYSGKDN 457
>At4g04400.1 68417.m00634 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 735
Score = 31.9 bits (69), Expect = 7.7
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 367 KSQIITLNDEDVNMSENERKKSHLNSVTENQDSDG---DDEISLLSLKSFAAQQLLENRD 423
K I + + + + + K+ TE DG DD++ S + + RD
Sbjct: 599 KIDAIDVRVQSIELFVADLKEREHGKQTEEASQDGHATDDDVLFASPDGYVTTGNEQQRD 658
Query: 424 ILSPINKPDDQEQSNSTKVDTIKKKRGRPKK 454
I+ P+ E SN T K+ +G+ KK
Sbjct: 659 IVISERSPEVAENSNKETNTTEKEVKGKAKK 689
>At4g01090.1 68417.m00147 extra-large G-protein-related contains
weak similarity to extra-large G-protein [Arabidopsis
thaliana] gi|3201682|gb|AAC19353
Length = 714
Score = 31.9 bits (69), Expect = 7.7
Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 446 KKKRGRPKKIYENKMINKSLNVDKNQSEATNHVLLIAQNSTVLKTPIISED--NLEFKSS 503
K + G ++ ++++ L V + +E T V L ++ T +I E+ +++F SS
Sbjct: 344 KLQCGACSEVISFTIVDRKL-VFSSGNEETKPVSLEVEDRNTTNTVVIEEEVSSVDFNSS 402
Query: 504 --DIVKSQVLLPPIITLNDEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQ 561
DI + P N +D I+T + S+ + E + S+ E +KS +
Sbjct: 403 GRDIPRKDEEEPVQELRNHQDTITTQSVRSE-SQHSDDEERSSNSSEQQQKEVKSVRRRG 461
Query: 562 LLDNTDITTPLSTPDNQ---EQCNSSNVEPIKKKRGRPKKNYEKKTTSRS-PNVDKNQSQ 617
+ P + PDN E SNV G + YEK +S D + +
Sbjct: 462 --KGSKAPEP-AAPDNASLLELFEYSNVNRAALAYGMAQLGYEKPDKQKSFMTQDSLKPE 518
Query: 618 EINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQK 677
+ ++ + ++T SE+ SN+ ++ +++ T + D+N S
Sbjct: 519 SVATETEVSYNGY---SNTEISEDSRYSNRKGSEYGSTEITTRSSTDQNEDQMKSLEVWV 575
Query: 678 NCFIETENQISNNDEI 693
N + E+ +S+ +++
Sbjct: 576 NGHLIPEDLVSSAEKL 591
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 31.9 bits (69), Expect = 7.7
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 570 TPLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSP 629
+PLS P ++E+ S + P+ K + +N ++ +SP Q+ + +
Sbjct: 63 SPLS-PKSKEEPESQTMTPLMSKHVKTHRNLLIQSPPKSPPESTESQQQFLASVPLRPLT 121
Query: 630 TVPKTSTTYSENKEPSNKSETQ 651
T PKT + S + + +S++Q
Sbjct: 122 TEPKTPLSPSSTLKATEESQSQ 143
>At3g19790.1 68416.m02506 hypothetical protein ; expression
supported by MPSS
Length = 167
Score = 31.9 bits (69), Expect = 7.7
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 618 EINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLND 662
++ DGL + + +P S + NK+PS+ ++T + + L+D
Sbjct: 72 DLTDGLDDILAARIPSLSALRTSNKQPSDSNKTSIVFDSMKALHD 116
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 31.9 bits (69), Expect = 7.7
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 697 PLNSNNTNIDTSKSDTTKILLESEKSVNNVTNESCVPNSDEAEQPLVNDTSGRPVRRVIR 756
P S N +D+S D+ L + N+ + V N +V++ +G
Sbjct: 8 PGTSTNVGVDSSVDDSMASLSICDSEHPNIYRQDIVKNKKTGSVGVVSEVAGDSDSD--- 64
Query: 757 KPIQYDEESDEDPFANVELSDDDLTNGKKNRYYSDDECIPHGTKKRK 803
I DEE D+D + + D+D+ GKK + +E + +G ++K
Sbjct: 65 SDIS-DEEEDDDDDEDNDDDDEDVEEGKK----ASEENVVNGDGEKK 106
>At1g42550.1 68414.m04906 expressed protein
Length = 708
Score = 31.9 bits (69), Expect = 7.7
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 340 TMLKKSITGSDDKFELQSSDEPEAPVIKSQIITLNDEDVNMSENERKKSHLNSVTENQDS 399
+M+K G D + E Q DE E V K + L DE+ + + K ++ + +
Sbjct: 314 SMMKDESDGGDGETESQRLDEEEQTVTKEFLQLLEDEETEKLKFYQHKMDISELRSGESV 373
Query: 400 DGDDEISLLSL 410
D + E L L
Sbjct: 374 DDESENYLSDL 384
>At1g32830.1 68414.m04046 hypothetical protein similar to At2g04970,
At2g15200, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 707
Score = 31.9 bits (69), Expect = 7.7
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 8/154 (5%)
Query: 631 VPKTSTTYSENKEPSNKSETQVTESQVITLNDEDE--NIQSYISENEQKNCFIETENQIS 688
+PK E +E + E + E + + D N++ + K C E E +
Sbjct: 395 IPKQGDEEMEGEEEKLEEEGKEEEEEKVEYRDHHSTCNVEETEKQENPKQCDEEMEREEG 454
Query: 689 NNDEICMLPLNSNNTNIDTSKSDTTKILLESEKS---VNNVTNESCVPNSDEAEQPLVND 745
+++ ++ + K +E ++ +++ N P E+ PL
Sbjct: 455 KEEKVEEHDEYNDVLKEENVKEHDEHDEIEDQEEYAILSDDENNGTAPTEKESH-PLKEK 513
Query: 746 TSGRPVRRVIRKPIQYDEESDEDPFANVELSDDD 779
T+ P + + ++DE D++ A V LSDD+
Sbjct: 514 TTEVPKEETVEEHDEHDETEDQE--AYVILSDDE 545
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.127 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,099,998
Number of Sequences: 28952
Number of extensions: 3082129
Number of successful extensions: 10498
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 9986
Number of HSP's gapped (non-prelim): 515
length of query: 3376
length of database: 12,070,560
effective HSP length: 95
effective length of query: 3281
effective length of database: 9,320,120
effective search space: 30579313720
effective search space used: 30579313720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 69 (31.9 bits)
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