Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001850-TA|BGIBMGA001850-PA|IPR000326|Phosphoesterase,
PA-phosphatase related, IPR008934|Acid phosphatase/vanadium-dependent
haloperoxidase
         (240 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    26   0.30 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    26   0.30 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.52 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   8.5  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 39  TVTSLILMTTIFIIPIGVFMIT--EYIFTPNE-IPLSDRTMRAFLK--SSWLFKTYLYGF 93
           T T+    + +   P+  F I+   Y++TP+  I L + +  +     SS +F  Y+   
Sbjct: 11  TTTTTTTSSALNSTPLIEFNISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTT 70

Query: 94  MMNLCIVEVMKGIVGN 109
            M  CI+ +  G++GN
Sbjct: 71  SMVFCIIIMCLGVIGN 86


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 39  TVTSLILMTTIFIIPIGVFMIT--EYIFTPNE-IPLSDRTMRAFLK--SSWLFKTYLYGF 93
           T T+    + +   P+  F I+   Y++TP+  I L + +  +     SS +F  Y+   
Sbjct: 11  TTTTTTTSSALNSTPLIEFNISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTT 70

Query: 94  MMNLCIVEVMKGIVGN 109
            M  CI+ +  G++GN
Sbjct: 71  SMVFCIIIMCLGVIGN 86


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 43  LILMTTIFIIPIGVFMITEYIFTPNEIPLSDRTMRAFLKSSWLFKTYLYGFMMNLCIVEV 102
           L+ +T  F++ +G   +T YI   N       T+   +K+  +    LY ++ ++C   V
Sbjct: 218 LVFITINFVVLLGDLYVTLYIILTNNQAKYCTTLIGLIKNCVIVIFELY-YLSHVC-QNV 275

Query: 103 MKGIVGN 109
              ++GN
Sbjct: 276 STEVIGN 282


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 94  MMNLCIVEVMKGIVGNPRPVFFALCQPDT 122
           + ++C   V   +  + R  F ALCQ DT
Sbjct: 152 LFSVCYPRVSAQMKADLRSHFRALCQDDT 180


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory
          receptor candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 31 ISFDYTGETVTSLILMTTIFI 51
          I+F  T  T+ ++ILM  +F+
Sbjct: 74 INFVATFRTIANIILMAVLFL 94


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.329    0.140    0.460 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,799
Number of Sequences: 317
Number of extensions: 2137
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 5
length of query: 240
length of database: 114,650
effective HSP length: 55
effective length of query: 185
effective length of database: 97,215
effective search space: 17984775
effective search space used: 17984775
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 42 (21.0 bits)