Silkworm BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001850-TA|BGIBMGA001850-PA|IPR000326|Phosphoesterase,
PA-phosphatase related, IPR008934|Acid phosphatase/vanadium-dependent
haloperoxidase
         (240 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g18220.1 68416.m02318 phosphatidic acid phosphatase family pr...    60   1e-09
At3g02600.1 68416.m00251 phosphatidic acid phosphatase family pr...    59   2e-09
At1g15080.1 68414.m01802 phosphatidic acid phosphatase family pr...    59   2e-09
At2g01180.2 68415.m00028 phosphatidic acid phosphatase family pr...    54   1e-07
At2g01180.1 68415.m00029 phosphatidic acid phosphatase family pr...    54   1e-07
At5g61690.1 68418.m07740 ABC transporter family protein ABC tran...    32   0.40 
At5g17590.1 68418.m02063 prothymosin alpha-related contains weak...    29   2.1  
At4g15340.1 68417.m02346 pentacyclic triterpene synthase (04C11)...    29   2.8  
At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative ...    29   2.8  
At5g36150.1 68418.m04356 pentacyclic triterpene synthase, putati...    28   4.9  
At1g28300.1 68414.m03473 transcriptional factor B3 family protei...    28   6.5  

>At3g18220.1 68416.m02318 phosphatidic acid phosphatase family
           protein / PAP2 family protein similar to phosphatidic
           acid phosphatase [Mus musculus] GI:1487873; contains
           Pfam profile: PF01569 phosphatase PAP2 superfamily
          Length = 308

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 4/128 (3%)

Query: 103 MKGIVGNPRPVFFALCQPDTAKTCNGTDFVSTFECTSSYSRWYRMDSYRSFPSGHTSLSV 162
           +K  VG PRP FF  C P+     +      T +      +    + Y+SFPSGHTS S 
Sbjct: 117 IKDAVGRPRPNFFYRCFPNGKPKFHP----DTKDVVCHGVKKIIKEGYKSFPSGHTSWSF 172

Query: 163 YCGFFLAWYLQKRAFNWSYRSELVVPXXXXXXXXXXXXXXXTRITDRMHHWWDVLIGSAI 222
               FLAWYL  +   +  R  +                  +R+ D  HHW DV  G+ I
Sbjct: 173 AGLTFLAWYLSGKIKVFDRRGHVAKLCLVFLPILISILIGISRVDDYWHHWTDVFAGAII 232

Query: 223 GLITLLYT 230
           G+    ++
Sbjct: 233 GIFVASFS 240


>At3g02600.1 68416.m00251 phosphatidic acid phosphatase family
           protein / PAP2 family protein similar to phosphatidic
           acid phosphatase [Mus musculus] GI:1487873; contains
           Pfam profile: PF01569 phosphatase PAP2 superfamily
          Length = 364

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 5/135 (3%)

Query: 90  LYGFMMNLCIVEVMKGIVGNPRPVFFALCQPDTAKTCNGTDFVSTFECTSSYSRWYRMDS 149
           LY  ++   + + +K  VG PRP FF  C PD        D +    C    S     + 
Sbjct: 154 LYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKAL---YDSLGDVICHGDKS--VIREG 208

Query: 150 YRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSELVVPXXXXXXXXXXXXXXXTRITDR 209
           ++SFPSGHTS S     FL+ YL  +   +  +  +                  +R+ D 
Sbjct: 209 HKSFPSGHTSWSFSGLGFLSLYLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDY 268

Query: 210 MHHWWDVLIGSAIGL 224
            HHW DV  G  +GL
Sbjct: 269 WHHWQDVFAGGLLGL 283


>At1g15080.1 68414.m01802 phosphatidic acid phosphatase family
           protein / PAP2 family protein similar to phosphatidic
           acid phosphatase 2a2 [Cavia porcellus] GI:3641336;
           contains Pfam profile PF01569 PAP2 superfamily
          Length = 290

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 4/135 (2%)

Query: 90  LYGFMMNLCIVEVMKGIVGNPRPVFFALCQPDTAKTCNGTDFVSTFECTSSYSRWYRMDS 149
           L+  ++   I + +K  VG PRP FF  C PD     +  +      CT   ++    + 
Sbjct: 104 LFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGIGIFH--NVTKNVLCTG--AKDVVKEG 159

Query: 150 YRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSELVVPXXXXXXXXXXXXXXXTRITDR 209
           ++SFPSGHTS S     FL+ YL  +   +  R  +                  +R+ D 
Sbjct: 160 HKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDQRGHVAKLCIVILPLLVAALVGVSRVDDY 219

Query: 210 MHHWWDVLIGSAIGL 224
            HHW DV  G+ IGL
Sbjct: 220 WHHWQDVFGGAIIGL 234


>At2g01180.2 68415.m00028 phosphatidic acid phosphatase family
           protein / PAP2 family protein similar to phosphatidic
           acid phosphatase 2a2 [Cavia porcellus] GI:3641336;
           contains Pfam profile PF01569 PAP2 superfamily
          Length = 302

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 5/144 (3%)

Query: 90  LYGFMMNLCIVEVMKGIVGNPRPVFFALCQPDTAKTCNGTDFVSTFECTSSYSRWYRMDS 149
           L+  ++   I + +K   G PRP F+  C PD  +     D +    C    +     + 
Sbjct: 104 LFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELY---DALGGVVCHGKAAEV--KEG 158

Query: 150 YRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSELVVPXXXXXXXXXXXXXXXTRITDR 209
           ++SFPSGHTS S     FL+ YL  +   ++    +                  +R+ D 
Sbjct: 159 HKSFPSGHTSWSFAGLTFLSLYLSGKIKAFNNEGHVAKLCLVIFPLLAACLVGISRVDDY 218

Query: 210 MHHWWDVLIGSAIGLITLLYTVKE 233
            HHW DV  G+ IG +   +  ++
Sbjct: 219 WHHWQDVFAGALIGTLVAAFCYRQ 242


>At2g01180.1 68415.m00029 phosphatidic acid phosphatase family
           protein / PAP2 family protein similar to phosphatidic
           acid phosphatase 2a2 [Cavia porcellus] GI:3641336;
           contains Pfam profile PF01569 PAP2 superfamily
          Length = 327

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 5/144 (3%)

Query: 90  LYGFMMNLCIVEVMKGIVGNPRPVFFALCQPDTAKTCNGTDFVSTFECTSSYSRWYRMDS 149
           L+  ++   I + +K   G PRP F+  C PD  +     D +    C    +     + 
Sbjct: 129 LFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELY---DALGGVVCHGKAAEV--KEG 183

Query: 150 YRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSELVVPXXXXXXXXXXXXXXXTRITDR 209
           ++SFPSGHTS S     FL+ YL  +   ++    +                  +R+ D 
Sbjct: 184 HKSFPSGHTSWSFAGLTFLSLYLSGKIKAFNNEGHVAKLCLVIFPLLAACLVGISRVDDY 243

Query: 210 MHHWWDVLIGSAIGLITLLYTVKE 233
            HHW DV  G+ IG +   +  ++
Sbjct: 244 WHHWQDVFAGALIGTLVAAFCYRQ 267


>At5g61690.1 68418.m07740 ABC transporter family protein ABC
           transport protein, Dictyostelium discoideum, PIR:T18288
          Length = 954

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 29  AAISFDYTGETVTSLILMTTIF---IIPIGVFMITEYIFTPNEIPLSDRTMRAFLKSSWL 85
           +A  F Y+     S  +M ++F       G+ ++ +   TP    +S  + RA +   WL
Sbjct: 356 SATGFPYSSSYAVSRRVMWSLFPPNTFSAGLKLLLDATSTPKSSGIS-WSNRANIIYQWL 414

Query: 86  FKTYLYGFMMNLCIVEVMKGIVGNPRPVFFAL 117
             T+L+ F++ +    ++    G  +P+F+ L
Sbjct: 415 LGTFLFWFVLAIYFDNIIPNASGVRKPIFYFL 446


>At5g17590.1 68418.m02063 prothymosin alpha-related contains weak
           similarity to Prothymosin alpha (Swiss-Prot:P06454)
           [Homo sapiens]
          Length = 192

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 43  LILMTTIFI--IPIGVFMITEYIFTPNEIPLSDRTMRAFLKSSWLF--KTYLYGFMMNLC 98
           + ++T +F+  I IG  ++  Y+   +  PL  +    F+   WLF    Y+Y  ++  C
Sbjct: 10  IYIITVLFLSCILIGGVLLGLYLVRSDPNPLFLQAGMVFVGVPWLFWFLAYVYSCVLKPC 69

Query: 99  IVEVMKGIVGNPRPV 113
           ++ V +  + N + V
Sbjct: 70  VIFVSQSTIFNSKSV 84


>At4g15340.1 68417.m02346 pentacyclic triterpene synthase (04C11)
           identical to pentacyclic triterpene synthase
           [gi:6650208] [PMID:11247608]
          Length = 766

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 34  DYTGETVTSLILMTTIFIIPIGVF-----MITEYIFTPNEIPLSDRTMRAFLKSSWLFKT 88
           D+ G T T LI    + ++ +  +     M  E+ F P+  P++  T+  +L+  ++  +
Sbjct: 212 DHGGATYTPLIGKACLSVLGVYDWSGCKPMPPEFWFLPSSFPINGGTLWIYLRDIFMGLS 271

Query: 89  YLYG 92
           YLYG
Sbjct: 272 YLYG 275


>At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative
           similar to DNA-binding protein DF1 [Pisum sativum]
           GI:13646986
          Length = 603

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 110 PRPVFFALCQPDTAKTCNGTDFVSTFECTSSYSRWYRMD 148
           P+P+   +   DT KT NG D   T   ++S SRW +++
Sbjct: 375 PQPIQAVVSTLDTTKTDNGGDQNMTPAASASSSRWPKVE 413


>At5g36150.1 68418.m04356 pentacyclic triterpene synthase, putative
           similar to pentacyclic triterpene synthase [gi:6650208]
           [PMID:11247608]; oxidosqualene cyclase; also highly
           similar to beta-amyrin synthase, lupeol synthase,
           cycloartenol synthase
          Length = 729

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/32 (31%), Positives = 21/32 (65%)

Query: 61  EYIFTPNEIPLSDRTMRAFLKSSWLFKTYLYG 92
           E+ F P+  P++  T+  +L+ +++  +YLYG
Sbjct: 242 EFWFFPSYFPINGGTLWIYLRDTFMAMSYLYG 273


>At1g28300.1 68414.m03473 transcriptional factor B3 family protein /
           leafy cotyledon 2 (LEC2) nearly identical to LEAFY
           COTYLEDON 2 [Arabidopsis thaliana] GI:15987516; contains
           Pfam profile PF02362: B3 DNA binding domain
          Length = 363

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 100 VEVMKGIVGNPRPVFFALCQPDTAKTCNGTDFVS 133
           VE M  ++ NP+PV+ + C P    T  G++F S
Sbjct: 53  VEQMAAVM-NPQPVYLSECYPQIPVTQTGSEFGS 85


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.329    0.140    0.460 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,961,590
Number of Sequences: 28952
Number of extensions: 188321
Number of successful extensions: 453
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 435
Number of HSP's gapped (non-prelim): 11
length of query: 240
length of database: 12,070,560
effective HSP length: 79
effective length of query: 161
effective length of database: 9,783,352
effective search space: 1575119672
effective search space used: 1575119672
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 58 (27.5 bits)