Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001846-TA|BGIBMGA001846-PA|undefined
         (379 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    24   1.6  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   6.3  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   6.3  

>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 228 ESIQEPILNALKGCLGDIKALACKDNMKSLQTHLLCNTQKL 268
           + +QE IL  ++  LGDI A     ++++L+    C  + L
Sbjct: 16  KDVQETILQEMRDVLGDIHAKPTYSDLQNLKYLERCIKESL 56


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 325 NSDVVEFIYNDNVIKGNLGCGEVQDKKMSASVGVKTDRPNRI 366
           N D+ E + ND + K  L C   + K       +K D P+ +
Sbjct: 26  NIDIDEILKNDRLTKNYLDCILEKGKCTPEGEELKKDIPDAL 67


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 229 SIQEPILNALKGCLGDIKALACKDNMKSLQ 258
           ++QE I+  +K  LGD K     ++++ L+
Sbjct: 17  TVQEEIVQEMKDVLGDTKKKPVYNDLQELK 46


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.131    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,641
Number of Sequences: 317
Number of extensions: 2607
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 379
length of database: 114,650
effective HSP length: 58
effective length of query: 321
effective length of database: 96,264
effective search space: 30900744
effective search space used: 30900744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 44 (21.8 bits)