GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001837-TA|BGIBMGA001837-PA|undefined
         (173 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q38A01 Cluster: Ubiquitin-protein ligase, putative; n=1...    35   0.89 
UniRef50_A0DXT7 Cluster: Chromosome undetermined scaffold_69, wh...    34   1.5  
UniRef50_A5L3C6 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_Q7SF69 Cluster: Putative uncharacterized protein NCU092...    33   3.6  
UniRef50_Q5BVF9 Cluster: SJCHGC06720 protein; n=1; Schistosoma j...    32   6.2  
UniRef50_Q7RZC6 Cluster: Putative uncharacterized protein NCU039...    32   8.2  

>UniRef50_Q38A01 Cluster: Ubiquitin-protein ligase, putative; n=1;
           Trypanosoma brucei|Rep: Ubiquitin-protein ligase,
           putative - Trypanosoma brucei
          Length = 1868

 Score = 35.1 bits (77), Expect = 0.89
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 6/80 (7%)

Query: 12  KKAPNKNLANDDEGRVGEMVTADLNEAATESLGGVAEPAIRNEIIPLANVISKTGSQIET 71
           K  PN +L    E  +G +V+  L    T  L G  EPA+ +  +P  N  S   S  E+
Sbjct: 476 KVTPNSSLPV--EVALGRLVS--LGAGTTTVLDG--EPAVVSAGVPTGNAHSNEQSYCES 529

Query: 72  THANFRNEVKPQSSKQRSRG 91
              +F N   P SS Q SRG
Sbjct: 530 ASYSFGNIAAPSSSNQPSRG 549


>UniRef50_A0DXT7 Cluster: Chromosome undetermined scaffold_69, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_69,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 945

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 7/70 (10%)

Query: 35  LNEAATESLGGVAEPAIRNEIIPLANVISKT--GS-----QIETTHANFRNEVKPQSSKQ 87
           +N+A    +    E   +N II + N++ ++  GS     QI+       +E+KPQ  +Q
Sbjct: 810 INQALGIGMKKTLEITFKNRIIKITNILKRSTIGSLSIEQQIQLAALELSSEIKPQQQQQ 869

Query: 88  RSRGRFLDFV 97
           R + +F  FV
Sbjct: 870 RQQSKFQKFV 879


>UniRef50_A5L3C6 Cluster: Putative uncharacterized protein; n=1;
           Vibrionales bacterium SWAT-3|Rep: Putative
           uncharacterized protein - Vibrionales bacterium SWAT-3
          Length = 231

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 1/95 (1%)

Query: 5   KNDTELTKKAPNKNLANDDEG-RVGEMVTADLNEAATESLGGVAEPAIRNEIIPLANVIS 63
           K  TE+ K A N N A   E  R+G        +A  ESLG   +    NE +    + S
Sbjct: 52  KAATEIAKSAMNSNSAAMKEAARLGSDALKANEKAIDESLGFGRDALKSNESVSKEALKS 111

Query: 64  KTGSQIETTHANFRNEVKPQSSKQRSRGRFLDFVR 98
                 E   AN  +     SS Q S  + LDF R
Sbjct: 112 NESVSKEAIKANHESLKSALSSGQESLSKALDFSR 146


>UniRef50_Q7SF69 Cluster: Putative uncharacterized protein
           NCU09241.1; n=2; Sordariales|Rep: Putative
           uncharacterized protein NCU09241.1 - Neurospora crassa
          Length = 937

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 18/62 (29%), Positives = 27/62 (43%)

Query: 32  TADLNEAATESLGGVAEPAIRNEIIPLANVISKTGSQIETTHANFRNEVKPQSSKQRSRG 91
           T+D    AT SLG V   A  N + P+ + I    S  E    N   +  P +S   ++G
Sbjct: 639 TSDTPSPATSSLGAVGSMATDNHLRPILSDIEANPSSAELNRLNSSAKSNPSASASSAKG 698

Query: 92  RF 93
            +
Sbjct: 699 EW 700


>UniRef50_Q5BVF9 Cluster: SJCHGC06720 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06720 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 293

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 12  KKAPNKNLANDDEGRVGEMVTADLNEAATESLGGVAEPAIRNEIIPLANVISKTGSQIET 71
           ++  N N   D +  +G++ TA ++   T  L  +    + NE + + +V  ++  QI  
Sbjct: 167 QQCSNTNTTTDTDQLIGDLSTAIIDSPVTTILSSIPSTVVTNEAV-ITSVEDESDEQIIA 225

Query: 72  THANFRNEVKPQS 84
           +  N  N   PQ+
Sbjct: 226 SSDNCTNITVPQA 238


>UniRef50_Q7RZC6 Cluster: Putative uncharacterized protein
           NCU03928.1; n=2; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU03928.1 - Neurospora crassa
          Length = 1100

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 20  ANDDEGRVGEMVTADLNEAATESLGGVAEPAIRNEIIP---LANVISKTGSQIETTHANF 76
           + D   R  E  TA   +A+ +S      PA R + +    LA   S   +  +    N 
Sbjct: 803 STDSSRRDPETTTAHARQASNDSGAATPTPASREDYLANNTLARQASNDAASSDHLGGNS 862

Query: 77  RNEVKPQSSKQRSR 90
            N+V+P+SS   SR
Sbjct: 863 DNDVRPESSASNSR 876


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.314    0.129    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,977,996
Number of Sequences: 1657284
Number of extensions: 5459266
Number of successful extensions: 11979
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 11977
Number of HSP's gapped (non-prelim): 6
length of query: 173
length of database: 575,637,011
effective HSP length: 95
effective length of query: 78
effective length of database: 418,195,031
effective search space: 32619212418
effective search space used: 32619212418
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 69 (31.9 bits)