Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001823-TA|BGIBMGA001823-PA|IPR003579|Ras small GTPase,
Rab type, IPR013753|Ras
(131 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 60 4e-10
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 57 5e-09
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 4e-08
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 52 2e-07
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 50 8e-07
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 48 2e-06
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 48 3e-06
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 46 1e-05
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 46 1e-05
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 44 4e-05
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 43 9e-05
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 42 1e-04
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 42 1e-04
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 42 2e-04
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 41 3e-04
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 41 4e-04
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 7e-04
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 9e-04
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 38 0.002
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 38 0.004
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 37 0.006
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 36 0.008
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.011
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 36 0.011
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 36 0.011
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.019
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.033
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 33 0.076
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.100
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 33 0.100
SB_41710| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.13
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 31 0.23
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_18015| Best HMM Match : NACHT (HMM E-Value=5) 31 0.40
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.53
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.70
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 30 0.70
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.93
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 29 1.6
SB_58404| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 28 2.2
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 28 2.8
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 28 2.8
SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08) 27 5.0
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 27 5.0
SB_43519| Best HMM Match : Pre-SET (HMM E-Value=0.37) 27 5.0
SB_9096| Best HMM Match : Acid_phosphat_A (HMM E-Value=0.18) 27 6.6
SB_42615| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_30874| Best HMM Match : MTS (HMM E-Value=0.069) 27 6.6
SB_49273| Best HMM Match : Protamine_P2 (HMM E-Value=5.3) 26 8.7
SB_41617| Best HMM Match : RVT_1 (HMM E-Value=0) 26 8.7
SB_25567| Best HMM Match : RVT_1 (HMM E-Value=0) 26 8.7
SB_20042| Best HMM Match : RYDR_ITPR (HMM E-Value=0) 26 8.7
SB_4100| Best HMM Match : DUF1623 (HMM E-Value=3.7) 26 8.7
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 60.5 bits (140), Expect = 4e-10
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTV-EDSCKVYLCGTKKDLLDGGFVK 59
+TR YYRGA A++ Y+ SS E++ L +WL + RT+ + + L G KKDL
Sbjct: 160 VTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNKKDL----DAD 215
Query: 60 REVAEEIVNTYSQDLNGHFL-TSSKTGENVDELFQK 94
REV + ++Q+ FL TS+ TGENV+E F K
Sbjct: 216 REVTFLEASRFAQENELMFLETSALTGENVEEGFLK 251
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 56.8 bits (131), Expect = 5e-09
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 4 IYYRGAHAAIICYEPSSHESWTRLRHWLHEL-RTVEDSCKVYLCGTKKDLLDGGFVKREV 62
+YYRGA AAI+ Y+ ++ +++ R + W+ EL R + + L G K DL KR V
Sbjct: 89 MYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLAS----KRMV 144
Query: 63 AEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKI 95
E +Y++D F+ TS+KT NV+++F I
Sbjct: 145 EYEDAQSYAEDNGLLFMETSAKTAMNVNDIFLAI 178
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 54.0 bits (124), Expect = 4e-08
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL-RTVEDSCKVYLCGTKKDLLDGGFVK 59
+T YYRGAH I+ Y+ + ES+ ++ WL E+ R ++ L G K DL V
Sbjct: 94 ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVD 153
Query: 60 REVAEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDL 99
A+E Y++ L FL TS+K NV++ F + ++
Sbjct: 154 FTTAKE----YAESLGVPFLETSAKNATNVEQAFMTMAAEI 190
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVE-DSCKVYLCGTKKDLLDGGFVK 59
+T YYR AH ++ Y+ + E++ L WL E+ + L G K DL+D
Sbjct: 73 LTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLID----C 128
Query: 60 REVAEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDLAA 101
R+V +++ L+ F+ TS+K NV+ +F+ + +L A
Sbjct: 129 RQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELKA 171
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 49.6 bits (113), Expect = 8e-07
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVK 59
+T YYRGAH +I Y+ + ES+ L WL E+ T + + L G K DL V+
Sbjct: 384 ITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKIDLDTDREVQ 443
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELF 92
+ A+E + TS+K +NV E F
Sbjct: 444 PDAAQEWAALHDMPF---VETSAKGAKNVKEAF 473
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 48.0 bits (109), Expect = 2e-06
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRL--RHWLHELRTVEDSCKVYLCGTKKDLLD---- 54
++ Y RGA AAI+ Y+ + S L RH LH L+ E +C V + G KKDL+
Sbjct: 288 LSSFYCRGASAAIVAYDITKESSLKVLNDRH-LHLLQAAEPNCLVVIVGCKKDLVTDDTR 346
Query: 55 -----GGFVKREVAEEIV--NTYSQDLNGHFLTSSKTGENVDELFQKIV 96
G +V E+ + S F TSSKTG+ VD +F+ I+
Sbjct: 347 EITEAAGMELAKVQNELKSRSLLSLKRTPFFETSSKTGDGVDNVFEFIL 395
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 47.6 bits (108), Expect = 3e-06
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKR 60
+T YYRG H I+ Y+ +S +++ ++ WLHE+ D L G K D K+
Sbjct: 42 ITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEIDQNCDDVIRILVGNKDDCPS----KK 97
Query: 61 EVAEEIVNTYSQDLNGH-FLTSSKTGENVDE 90
V + + + +N F TS+K NV+E
Sbjct: 98 VVETADLQKFGEQMNIRVFETSAKENINVEE 128
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 46.0 bits (104), Expect = 1e-05
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVK 59
+T YYRGA ++ Y+ ++ +S++ + WL ++ + K L G K D+ D +
Sbjct: 21 ITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNKCDMYDKRVIS 80
Query: 60 REVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVEVMKTVTESRLLLTEL 119
+ E++ ++Y TS+ + NV++ F + +D+ V TV E TE
Sbjct: 81 QTKGEQLASSYGISF---IETSALSNINVEKSFVVLTEDILNAV-CPPTVEE-----TEK 131
Query: 120 DKRKSKK 126
K K KK
Sbjct: 132 GKGKKKK 138
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 46.0 bits (104), Expect = 1e-05
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCK----VYLCGTKKDLLDGG 56
+ + Y+R A ++ Y+ + S+ +R W + +E+SC + LCG K D+
Sbjct: 507 IAKSYFRKADGVLLLYDVTCETSFLDVRDW---VEAIEESCSKPVPIMLCGNKIDIRQSA 563
Query: 57 FV--KREVAEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDLAADVEVMKTVTESR 113
K + E + +++ F+ TSSK +N+ E ++ + DVE ++ +
Sbjct: 564 AAENKTVITAESGSRLAKEHGALFIETSSKENKNIAEACIELA-RMLRDVEDIEVKQNNG 622
Query: 114 LLLTELDKRKSKKDVCA 130
+ LT+ D +K K + C+
Sbjct: 623 MKLTDNDIKKKKTNCCS 639
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 44.0 bits (99), Expect = 4e-05
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL-RTVEDSCKVYLCGTKKDLLDGGFVK 59
+T+ YYRGAHA I+ + S L HW+H+ D+ KV L K DL
Sbjct: 76 VTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFCPDALKV-LVANKIDL------D 128
Query: 60 REVAEEIVNTYSQDLNGH--FLTSSKTGENVDELFQKIVDDL 99
+V E V ++ H F S+KTGE + + +I L
Sbjct: 129 EQVTTESVELFASSHECHLTFRISAKTGEGIGKACTQIAKAL 170
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 42.7 bits (96), Expect = 9e-05
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVK 59
+T YYRGA A++ Y+ + S+ L W+ ELR D + L G K DL ++
Sbjct: 8 ITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIE 67
Query: 60 REVAEEIVNTYSQ-DLNGHFLTSSKTGENVDELFQKIVD 97
++ + + L S+ E + +F I D
Sbjct: 68 NRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFD 106
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 42.3 bits (95), Expect = 1e-04
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLL---DGG 56
+T+ Y+R A +I Y+ ++ S+T L+ W+ + E+ + G K DL +
Sbjct: 961 ITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNKTDLAEDEESR 1020
Query: 57 FVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVD 97
VK + + N Y + TS+KTG N+ E K+ +
Sbjct: 1021 VVKTIDGKNLANQYDA---LYMETSAKTGNNIQEAMYKLAE 1058
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 42.3 bits (95), Expect = 1e-04
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDL 52
+T YYRGA A++ Y+ + S+ L W+ ELR D + L G K DL
Sbjct: 8 ITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDL 60
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 41.9 bits (94), Expect = 2e-04
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDS-CKVYLCGTKKDLLDGGFVKREVA 63
YYRGA A++ Y+ + H ++ + WL ELR DS + L G K DL V + A
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEA 61
Query: 64 EEIVNTY 70
+ Y
Sbjct: 62 KAFAEIY 68
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 41.1 bits (92), Expect = 3e-04
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 4 IYYRGAHAAIICYEPSSHESWTRLRHWLHEL-RTVEDSCKVYLCGTKKDLLDGGFVKREV 62
+YYR A AAI+ Y+ + ++ LR W+ EL R + + G K D D +R+V
Sbjct: 28 LYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKAD----QRDV 83
Query: 63 AEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKI 95
+ ++ ++ F TS+ T +NV LF+++
Sbjct: 84 QVQDAQDFAGSVDAIFAETSALTSKNVHWLFEEL 117
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 40.7 bits (91), Expect = 4e-04
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 21 HESWTRLRHWLHELRTVE-DSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQDLNGHFL 79
+ S+ + W+ ++RT + + L G K DL D KR+V E +++LN F+
Sbjct: 11 YNSFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSD----KRQVTAEEGERKAKELNVMFI 66
Query: 80 -TSSKTGENVDELFQKIVDDLAADVEVMKTVTE 111
TS+K G NV +LF+++ AA + M++ TE
Sbjct: 67 ETSAKAGYNVKQLFRRV----AAALPGMESTTE 95
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 39.9 bits (89), Expect = 7e-04
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVE-DSCKVYLCGTKKDLLDGGFVKREVA 63
Y R + AA+I ++ +++ S+ + W+ +R + + + G K D D +R+V+
Sbjct: 232 YIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESD----RRKVS 287
Query: 64 EEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDL 99
++ ++ L ++ TS+K+G NV LF K+ DL
Sbjct: 288 YDVAEKSAERLGLSYVETSAKSGYNVKLLFTKLSKDL 324
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 39.5 bits (88), Expect = 9e-04
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELR---TVEDSCKVYLCGTKKD 51
+T YYRGA I+ Y+ +S E++ +L WL+E+ T +D K+ L G K D
Sbjct: 73 LTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKM-LVGNKID 125
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKREVAE 64
YY AII ++ +S ++ + +W +L V ++ + LCG K D+ D R+V
Sbjct: 101 YYIQGQCAIIMFDVTSRVTYKNVPNWHRDLERVCENIPIVLCGNKVDIKD-----RKVKA 155
Query: 65 EIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAAD 102
+ + + + ++ S+K+ N ++ F + L D
Sbjct: 156 KAITFHRKKNLQYYDLSAKSNYNFEKPFLWLARKLVGD 193
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 9 AHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVKREVAEEIV 67
A ++ Y+ + +++ + WL + + + + G K D+ D V RE E+I
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIA 184
Query: 68 NTYSQDLNGHFL-TSSKTGENVDELFQKIVDDL 99
+ FL TS+KT N+++ FQ + D+
Sbjct: 185 REHGI----RFLETSAKTNINIEQAFQYLAQDI 213
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 36.7 bits (81), Expect = 0.006
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVED-SCKVYLCGTKKDL 52
+T YYRGA A++ Y+ + +++ + WL E+R D + V L G K DL
Sbjct: 77 ITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDL 129
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 36.3 bits (80), Expect = 0.008
Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRT---VEDSCKVYLCGTKKDLLDGGFVKRE 61
Y+RG + ++ + ++ +L W+ RT + + ++ L G KKD+ D V
Sbjct: 421 YFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGNKKDMEDNRAVTYS 480
Query: 62 VAEEIVNTYSQDLNG--HFLTSSKTGENVDELFQKIVDDLAADVEV 105
A+E +NG + TS+K +++ ++F+K++ L V++
Sbjct: 481 RAKEFA-----AMNGFPYIETSAKDVDSLMDMFKKMLQLLVHAVDI 521
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 35.9 bits (79), Expect = 0.011
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTV--EDSCKV--YLCGTKKDLLDGG 56
+T+IY + + + + S + L W ++ V DS +V ++ G K D
Sbjct: 79 LTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLDVFLGDSSRVLKFVLGCKIDTQHEA 138
Query: 57 FVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADV 103
++ + AE+ + +L+ +TS+ TG NV++ F++I D L V
Sbjct: 139 DIQPK-AEDFASRIGAELS---ITSAITGTNVNDFFERIADKLKQHV 181
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 35.9 bits (79), Expect = 0.011
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELR--TVEDSCKVYLCGTKKDLLDGGFV 58
+T+ YYR + II Y+ + +++ + W +++ E++ K+ L G KKDL
Sbjct: 111 ITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKL-LVGNKKDLER---- 165
Query: 59 KREVA-EEIVNTYSQ-DLNGHFLTSSKTGENVDELFQKIVDDL 99
+REV+ E+ VN S + TS+K N++ F ++ +L
Sbjct: 166 EREVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLAREL 208
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 35.9 bits (79), Expect = 0.011
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 20 SHESWTRLRHWLHELRTVEDSCKV--YLCGTKKDLLDGGFVKREVAEEIVNTYSQDLNGH 77
S+E +L + ++R +D C++ L G K+DL G V ++ A E + Y H
Sbjct: 48 SYEMARQLVKLVTQVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEAREFASEYG---CSH 104
Query: 78 FLTSSKTGENVDELF 92
+ TS+ T NV +F
Sbjct: 105 YETSALTNRNVHVIF 119
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 35.1 bits (77), Expect = 0.019
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELR------TVEDSCKVYLCGTKKDLLDGGFV 58
+Y+ A++ Y+ +S ES+ L WL E++ + +S +C K D
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSR----- 64
Query: 59 KREVAEEIVNTYSQDLN-GHFLTSSKTGENVDELFQKIVDDLAADVE 104
KR V E ++++ +F TS++TG+ + E+FQ + + +E
Sbjct: 65 KRLVEESEGRQWAENHKFCYFETSAQTGDGIPEVFQTLFTGVVKALE 111
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 34.3 bits (75), Expect = 0.033
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELR--TVEDSCKVYLCGTKKDLLDGGFV 58
+T+ YYR A A I+ ++ ++ ++ + WL ++ T ++ KV L G K DL G
Sbjct: 76 ITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKV-LVGNKTDL--KGAS 132
Query: 59 KREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDL 99
++ N + + TS+K +NV+ L ++ + L
Sbjct: 133 RKVNTRSAANLAEFEELLYLETSAKWDDNVEVLIAELAEQL 173
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 33.1 bits (72), Expect = 0.076
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKV--YLCGTKKDLLDGGFVKREV 62
Y R + + ++ +S+ + + +++ V+D+ +V L G K DL V
Sbjct: 297 YMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPMVLVGNKCDLPQRT-VSTSD 355
Query: 63 AEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADV 103
A+E+ +Y+ TS+KT + VD+ F +V ++ DV
Sbjct: 356 AQELAKSYNIPFQE---TSAKTRQGVDDAFYTLVREIRKDV 393
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 32.7 bits (71), Expect = 0.100
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 13 IICYEPSSHESWTRLRHWLHELR--TVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNTY 70
++ Y+ ++ +S+ + WL + + CKV L G K D D +R + + +
Sbjct: 6 LLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLL-GNKLDAED----ERVIDAQRGRSV 60
Query: 71 SQDLNGHFL-TSSKTGENVDELFQKI 95
+D N F S++TGENV + F +
Sbjct: 61 GEDNNLEFYEASARTGENVQQAFMAV 86
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 32.7 bits (71), Expect = 0.100
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDS--CKVYLCGTKKDLLDGGFV 58
M +Y + ++ Y + +++ L+ ++ V+ S + L G K D+ D V
Sbjct: 51 MRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREV 110
Query: 59 KREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIV 96
A+++ + + TS+KT NVD++F ++V
Sbjct: 111 SVGEAKDLAEAWGCPF---YETSAKTRSNVDKVFAEVV 145
>SB_41710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 32.3 bits (70), Expect = 0.13
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 49 KKDLLDGGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVEVMKT 108
KK + FV +A NT + G F S + E++DE ++I +L D
Sbjct: 8 KKQVPGVNFVMH-IAHCTRNTEICPICGEFYPKSSSKEHIDEYHKEISCELCGD------ 60
Query: 109 VTESRLLLTELDKRKSKKDVC 129
V ES+ LTE + SK+ +C
Sbjct: 61 VVESKAKLTEHESHCSKRKIC 81
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 31.5 bits (68), Expect = 0.23
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 6 YRGAHAAIICYEPSSHESWTRLRH-WLHELRTVEDSCKVYLCGTKKDLLDGGFVKREVAE 64
Y A I+C+ S S+ + W+ E+R + + L GT DL D + E+++
Sbjct: 87 YSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDLKDCYKILTELSQ 146
Query: 65 E 65
+
Sbjct: 147 Q 147
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 31.1 bits (67), Expect = 0.31
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHEL-RTVEDSCKVYLCGTKKDL 52
+T+ YY A I+ Y+ ++ +S+ L WL + R + + G K DL
Sbjct: 72 ITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSDL 124
>SB_18015| Best HMM Match : NACHT (HMM E-Value=5)
Length = 166
Score = 30.7 bits (66), Expect = 0.40
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 27 LRHWLHELRTVEDSCKVYLC------GTKKD-LLDG--GFVKREVAEEIVNTYSQDLNGH 77
L+H +L ED V LC TKK LL+G G K V++++VN+++ L GH
Sbjct: 35 LQHLFKDLLIAEDGSVVKLCDLLESDNTKKRILLEGNPGIGKTTVSKKLVNSWASHLQGH 94
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 30.3 bits (65), Expect = 0.53
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 4 IYYRGAHAAIICYEPSSHESWTRLRHWLHEL 34
I+Y G + I+ ++ ++ +S+T LR WL E+
Sbjct: 79 IFYNGINGLILVHDLTNRKSFTNLRKWLAEV 109
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 29.9 bits (64), Expect = 0.70
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
Query: 27 LRHWLHELRTVEDSCKVYLC------GTKKD-LLDG--GFVKREVAEEIVNTYSQDLNGH 77
L+H L ED V LC TKK LL+G G K V++++VN+++ L GH
Sbjct: 282 LQHLFKNLLIAEDGSVVKLCDLLESDNTKKRILLEGNPGIGKTTVSKKLVNSWASHLQGH 341
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 29.9 bits (64), Expect = 0.70
Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 4 IYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-VEDSCKVYLCGTKKDLLDGGFVKREV 62
+ YR A+I ++ + +S+ R+ WL +++ V L G K D + ++
Sbjct: 41 LIYRALSGAVIVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTDRPLNSW---KI 97
Query: 63 AEEIVNTYSQDLNGHFLTSSKTGE-NVDELFQKIVDDLAADVE 104
+ Y+ + ++ +S G N+DE+F +++ L E
Sbjct: 98 PSNVAAKYATNNGFLYIETSALGMCNIDEIFAILLELLMQQAE 140
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 29.5 bits (63), Expect = 0.93
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 68 NTYSQ---DLNGHFLTSSKTGENVDELFQKIVDDLAADVEVMKTVTESRLLLTELDKRKS 124
NTYSQ +LN F + E+ + +Q+ +DDL ++ +++ V + TEL S
Sbjct: 120 NTYSQKIANLNKKFKGEMQRWEDERQDYQRRIDDLQHELNILEEVDNLEGMKTELG--SS 177
Query: 125 KKDVCA 130
DV A
Sbjct: 178 GSDVAA 183
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT-----VEDSCKVYLCGTKKDLLDG 55
MTR+YY+GA A ++ ++ + W +L + L G K DL D
Sbjct: 84 MTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVGNKSDLPDR 143
Query: 56 GFVKREVAEEIVNTYS 71
V +E+ +++ +S
Sbjct: 144 P-VDKEIIDKLCKEHS 158
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 28.7 bits (61), Expect = 1.6
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKV--YLCGTKKDLLDGGFVKREV 62
YYR +A + Y+ + S+ L W+ E R S V L G K DL V +
Sbjct: 116 YYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLGLERTVSSNI 175
Query: 63 AEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVEVM---KTVTESRLLLTEL 119
A + ++++ L + + E ++ +F + L +M +T+T + E
Sbjct: 176 ARKFADSHNMPLWEISIKNDAELEQIEAIFLTLTHKLLKHKPLMNRERTMTADENVSDES 235
Query: 120 D-KRKSK 125
KR+S+
Sbjct: 236 KVKRRSR 242
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 28.7 bits (61), Expect = 1.6
Identities = 9/36 (25%), Positives = 23/36 (63%)
Query: 1 MTRIYYRGAHAAIICYEPSSHESWTRLRHWLHELRT 36
+T ++R A ++ ++ + +S+ +R+WL +L+T
Sbjct: 182 LTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQT 217
>SB_58404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 62 VAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKIVDDLAADVEVMKTV-TESRLLLTELD 120
++E++ + NG + + +DE ++ I D +DV V K + T S ++ LD
Sbjct: 130 LSEDVRTDFLNGTNGAVVVTEDQFVQIDEFYKLITPDEESDVPVAKQLRTASEHIVKLLD 189
Query: 121 KRKS---KKDVC 129
S KD+C
Sbjct: 190 HNNSAVVDKDLC 201
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 5 YYRGAHAAIICYEPSSHESWTRLRHWLHELR 35
+Y+ A++ Y+ +S ES+ L WL E++
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEIK 35
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 27.9 bits (59), Expect = 2.8
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 3 RIYYRGAHAAIICYEPSSHESWTRLRHWLHELRTVEDSCKVYL--CGTKKDLLDGGFVKR 60
R+YY+G I + + E R+ LH+L E+ +V L K+D+ +
Sbjct: 58 RVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDMAN-AMTAS 116
Query: 61 EVAEEI 66
E+ E++
Sbjct: 117 EIREKL 122
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 6 YRGAHAAIICYEPSSHESWTRLR-HWLHELRTVEDSCKVYLCGTKKDL 52
Y+G+ ++C++ S+ +++ R+ WL E V L G K D+
Sbjct: 73 YQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRVLIGNKNDI 120
>SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08)
Length = 893
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 39 DSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQDLNG 76
D CK+ C L+ GG +E+ + I+ T+ +NG
Sbjct: 572 DVCKLPNCFCSGALVPGGLNPKEIPQMIMLTFDDAING 609
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 17 EPSSHESWTRLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEE 65
E S E +L + +T+E+ K +CG LLD +K +EE
Sbjct: 70 EESKGEDMAKLEMIRNYRKTIEEELKT-ICGEILSLLDDSLIKNSQSEE 117
>SB_43519| Best HMM Match : Pre-SET (HMM E-Value=0.37)
Length = 829
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 54 DGGFVKREVAEEIVNTYSQDLNGHFLTSSKTGENVDELFQKI--VDDLAADVEVMKTVTE 111
D GF+ A + D+ GH T+S+ EN +++ + + DL D + E
Sbjct: 463 DEGFMNEVYAYFVALFQENDVQGHQRTTSRVDENANQVDSNVGLLGDLLGDFSLRSLFAE 522
Query: 112 SR 113
+
Sbjct: 523 PK 524
>SB_9096| Best HMM Match : Acid_phosphat_A (HMM E-Value=0.18)
Length = 417
Score = 26.6 bits (56), Expect = 6.6
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 64 EEIVNTYSQDLNG--HFLTSSKTGENVDELFQKIVDDLAADVEVMKT 108
E+++++Y+Q LNG H L + +E + DD ++E KT
Sbjct: 84 EQLLHSYTQGLNGDKHVLEKNDQDVQKEENNSQYADDFENEMESTKT 130
>SB_42615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 26.6 bits (56), Expect = 6.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 39 DSCKVYLCGTKKDLLDGGFVKREVAEEIV 67
++C Y G KDLLD G + A E++
Sbjct: 541 EACNPYTSGRLKDLLDSGDLVMATAREVL 569
>SB_30874| Best HMM Match : MTS (HMM E-Value=0.069)
Length = 233
Score = 26.6 bits (56), Expect = 6.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 31 LHELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQ 72
LHE+R + + K LC T+ +G V V + + + YS+
Sbjct: 40 LHEIRATDINAKAALCTTRTAKQNGCTVSAVVTDLLSSMYSR 81
>SB_49273| Best HMM Match : Protamine_P2 (HMM E-Value=5.3)
Length = 190
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 18 PSSHESWTRLRHWLH----ELRTVEDSCKVYLCGTKKDLLDGGFVKREVAEEIVNTYSQD 73
P H +TR+ ++ L+ +C+VY+CGT G + + I NT ++
Sbjct: 105 PVQHLKYTRMACRIYVCVLNLKFTRKACRVYVCGTPFKTHAQGMLGLRLWNTIQNTRARH 164
Query: 74 LNG 76
G
Sbjct: 165 AGG 167
>SB_41617| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 675
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 15 CYEPSSHESWTRLRHWLHELRTVE 38
C P E+WT +H + ELRT++
Sbjct: 516 CLMPLLFETWTVYQHEVRELRTLQ 539
>SB_25567| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 636
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 15 CYEPSSHESWTRLRHWLHELRTVE 38
C P E+WT +H + ELRT++
Sbjct: 477 CLMPLLFETWTVYQHEVRELRTLQ 500
>SB_20042| Best HMM Match : RYDR_ITPR (HMM E-Value=0)
Length = 340
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 19 SSHESWTRLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKREVAE 64
S E++ ++R L ELR + + ++++ +KKD + K+E A+
Sbjct: 83 SDVENYKQIRSDLDELRLLVEKSELWVYKSKKDSIGSTKKKKETAD 128
>SB_4100| Best HMM Match : DUF1623 (HMM E-Value=3.7)
Length = 183
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/58 (18%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 5 YYRGAHAAIICYEPSSHE-SWTRLRHWLHELRTVEDSCKVYLCGTKKDLLDGGFVKRE 61
+Y+ ++A ++ S+ T++ +WL ++ + +C + + +D++ G + RE
Sbjct: 104 HYKCSNAVLVSVNCFSYNLRLTKVLYWLDSVKVLLSNCSISVLLYSRDIMVGSRILRE 161
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.133 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,455,573
Number of Sequences: 59808
Number of extensions: 167672
Number of successful extensions: 622
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 582
Number of HSP's gapped (non-prelim): 58
length of query: 131
length of database: 16,821,457
effective HSP length: 75
effective length of query: 56
effective length of database: 12,335,857
effective search space: 690807992
effective search space used: 690807992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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