Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001822-TA|BGIBMGA001822-PA|IPR010285|Protein of unknown
function DUF889, eukaryote
(240 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g52960.1 68414.m05990 hypothetical protein very low similarit... 174 5e-44
At3g31980.1 68416.m04050 hypothetical protein low similarity to ... 167 4e-42
At4g03916.1 68417.m00552 hypothetical protein low similarity to ... 163 7e-41
At3g42100.1 68416.m04322 AT hook motif-containing protein-relate... 163 1e-40
At1g35940.1 68414.m04463 AT hook motif-containing protein-relate... 163 1e-40
At3g30560.1 68416.m03867 hypothetical protein 160 9e-40
At5g34960.1 68418.m04125 hypothetical protein includes At5g34960... 159 1e-39
At5g37110.1 68418.m04454 hypothetical protein 159 2e-39
At3g13250.1 68416.m01668 hypothetical protein low similarity to ... 157 6e-39
At1g54430.1 68414.m06209 hypothetical protein 157 8e-39
At3g30420.1 68416.m03847 hypothetical protein low similarity to ... 156 1e-38
At3g51700.1 68416.m05669 expressed protein 152 2e-37
At1g64410.1 68414.m07301 hypothetical protein 144 4e-35
At5g28780.1 68418.m03538 hypothetical protein various predicted ... 141 3e-34
At2g05080.1 68415.m00530 hypothetical protein low similarity to ... 114 4e-26
At3g43350.1 68416.m04582 helicase-related low similarity to SP|Q... 104 5e-23
At3g51690.1 68416.m05668 hypothetical protein low similarity to ... 103 1e-22
At5g32070.1 68418.m03689 hypothetical protein 87 1e-17
At4g03690.1 68417.m00504 hypothetical protein very low similarit... 85 4e-17
At3g42340.1 68416.m04375 hypothetical protein various predicted ... 50 2e-06
At2g39360.1 68415.m04831 protein kinase family protein contains ... 31 0.53
At2g29620.1 68415.m03598 expressed protein 30 1.2
At5g62110.1 68418.m07796 hypothetical protein 30 1.6
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain... 29 2.1
At1g25360.1 68414.m03146 pentatricopeptide (PPR) repeat-containi... 29 2.8
At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil... 29 3.7
At1g04780.1 68414.m00474 ankyrin repeat family protein contains ... 27 8.6
>At1g52960.1 68414.m05990 hypothetical protein very low similarity
to SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 996
Score = 174 bits (423), Expect = 5e-44
Identities = 97/226 (42%), Positives = 147/226 (65%), Gaps = 11/226 (4%)
Query: 18 LLKIGEDRMAK--DGNGMITLDREFC-NVVHNP-DDLNNFVYSELLTNMRNRDWLCERAI 73
+L +G+ ++++ DG +I + EF N ++P + + VY ++ + RAI
Sbjct: 750 ILDVGDGKISQPNDGIALIDIPEEFLINGDNDPVESIIEAVYGNTFMEEKDPKFFQGRAI 809
Query: 74 LAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV--MDTEQVTS--YPVEFLNSLELSGVPS 129
L PTNE V INE +MS ++G+ +LS D++ DT + Y +FLNS+ +SG+P+
Sbjct: 810 LCPTNEDVNSINEHMMSMLDGEERIYLSSDSIDPADTSSANNDAYSADFLNSVRVSGLPN 869
Query: 130 HKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPI 188
H LRLKVG PV+L+RN+D + LCNGTRLQVT + +++A +TG G+ VLIPR+ I
Sbjct: 870 HCLRLKVGCPVMLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLI 929
Query: 189 IPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
P+D LPF+ +R QFPL +AFAMTINK+QGQTL+ G+ L + ++
Sbjct: 930 TPSDTRLPFKMRRRQFPLSVAFAMTINKSQGQTLESVGLYLPRPVF 975
>At3g31980.1 68416.m04050 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 1099
Score = 167 bits (407), Expect = 4e-42
Identities = 94/234 (40%), Positives = 151/234 (64%), Gaps = 15/234 (6%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLDREFCNVVHNPDD----LNNFVYSELLTNMRNRD-- 66
+++ LL +G+ R+++ +G + +D ++ + +D + VY +L N D
Sbjct: 820 EFSNWLLAVGDGRVSEPNDGEVLIDIPEELLIKDANDPIEAITKAVYGDLDLLQPNNDPK 879
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSY--PV---EFLNS 121
+ +RAIL P N V IN+ ++ ++ G++V +LS D++ D + S PV +FLNS
Sbjct: 880 FFQQRAILCPRNTDVNTINDIMLDKLNGELVTYLSADSI-DPQDAASLNNPVLTPDFLNS 938
Query: 122 LELSGVPSHKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGEN 180
++LSG+P+H L LK+G PV+L+RN+D LCNGTRLQVT +G +I++A ++TG G+
Sbjct: 939 IKLSGLPNHNLTLKIGTPVMLLRNIDPKGGLCNGTRLQVTQMGNHILEARVITGDRVGDK 998
Query: 181 VLIPRIPIIPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
V+I + I P+D LPF+ +R QFP+ +AFAMTINK+QGQ+LK GI L K ++
Sbjct: 999 VIIIKSQISPSDTKLPFRMRRRQFPIAVAFAMTINKSQGQSLKEVGIYLPKPVF 1052
>At4g03916.1 68417.m00552 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 251
Score = 163 bits (397), Expect = 7e-41
Identities = 82/182 (45%), Positives = 131/182 (71%), Gaps = 7/182 (3%)
Query: 58 LLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSY-PV 116
LL ++ ++ ERAIL+PTNE V IN++++ ++ G+ +++LS+D++ ++ + Y PV
Sbjct: 46 LLLENKDLKFIQERAILSPTNEDVNTINQRLLEKLPGEEIQYLSIDSIDLSDTTSEYNPV 105
Query: 117 ---EFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIM 172
+FLNS+++SG+P+H LRL +G P++L+RNLD LCNGTRLQ+ + I++A+I+
Sbjct: 106 FTPDFLNSIKISGLPNHCLRLNIGAPIMLLRNLDPKGGLCNGTRLQMIQMTPPILQAVII 165
Query: 173 TGMAKGENVLIPRIPIIPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKS 230
TG G+ VLI +I I P+D LPF +R QFP+ +AFAMTINK+QGQ+LK G+ L +
Sbjct: 166 TGGRIGDKVLISKILITPSDTKLPFNMRRKQFPIVVAFAMTINKSQGQSLKEIGLYLPRP 225
Query: 231 MY 232
++
Sbjct: 226 VF 227
>At3g42100.1 68416.m04322 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; weak hit to Pfam profile
PF02178: AT hook motif
Length = 1752
Score = 163 bits (396), Expect = 1e-40
Identities = 96/233 (41%), Positives = 149/233 (63%), Gaps = 13/233 (5%)
Query: 13 QYAAALLKIGEDRMAK--DGNGMITLDREFC-NVVHNP-DDLNNFVYSEL--LTNMRNRD 66
Q++ LL +G+ R+ + DG +I + E NP + ++ +Y + L + +
Sbjct: 1474 QFSDWLLAVGDGRINEPNDGEALIDIPEELLIKEAGNPIEAISKEIYGDPSELHMINDPK 1533
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVT-SYPV---EFLNSL 122
+ RAILAPTNE V IN+ ++ ++ + +LS D++ T+ + + PV +FLNS+
Sbjct: 1534 FFQRRAILAPTNEDVNTINQYMLEHLKSEERIYLSADSIDPTDSDSLANPVITPDFLNSI 1593
Query: 123 ELSGVPSHKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGENV 181
+L+G+P H LRLKVG PV+L+RNLD LCNGTRLQ+T L + +V+A ++T G+ V
Sbjct: 1594 QLTGMPHHALRLKVGAPVMLLRNLDPKGGLCNGTRLQITQLAKQVVQAKVITRDRIGDIV 1653
Query: 182 LIPRIPIIPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
LIP I + P+D LPF+ +R QFPL +AFAMTINK+QGQ+L+ G+ L K ++
Sbjct: 1654 LIPLINLTPSDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEQVGLYLPKPVF 1706
>At1g35940.1 68414.m04463 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; contains weak hit to
PF02178: AT hook motif
Length = 1678
Score = 163 bits (396), Expect = 1e-40
Identities = 95/233 (40%), Positives = 148/233 (63%), Gaps = 13/233 (5%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLDREFCNVVHNPDD----LNNFVYSE--LLTNMRNRD 66
+++ LL + + R+ + +G+ T+D ++ N D + N +Y + +L + +
Sbjct: 1400 EFSDWLLAVSDGRINEPNDGVATIDIPEDLLITNADKPIETITNEIYGDPKILHEITDPK 1459
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVT-SYPV---EFLNSL 122
+ RAILAP NE V INE ++ +++ + +LS D++ T+ + + PV +FLNS+
Sbjct: 1460 FFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADSIDPTDSDSLNNPVITPDFLNSI 1519
Query: 123 ELSGVPSHKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGENV 181
+L G+P+H L LKVG PV+L+RNLD LCNGTRLQ+T L IV+A ++TG G V
Sbjct: 1520 KLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDRIGNIV 1579
Query: 182 LIPRIPIIPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
LIP + + PTD LPF+ +R QFPL +AFAMTINK+QGQ+L+ G+ L K ++
Sbjct: 1580 LIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEHIGLYLPKPVF 1632
>At3g30560.1 68416.m03867 hypothetical protein
Length = 1473
Score = 160 bits (388), Expect = 9e-40
Identities = 92/226 (40%), Positives = 143/226 (63%), Gaps = 11/226 (4%)
Query: 18 LLKIGEDRMAKDGNGMITLD-REFCNVVH--NP-DDLNNFVYSELLTNMRNRDWLCERAI 73
+L +GE ++ + +G+ + R+ + NP + + VY R+ + +RAI
Sbjct: 1203 ILAVGEGKLNQPNDGVTQIQIRDDILIPEGDNPIESIIKAVYGTSFDEERDPKFFQDRAI 1262
Query: 74 LAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV--MDT--EQVTSYPVEFLNSLELSGVPS 129
L PTN+ V IN+ ++S++ G+ + S D++ DT ++ Y +FLN +++SG+P+
Sbjct: 1263 LCPTNDDVNSINDHMLSKLTGEEKIYRSSDSIDPSDTRADKNPVYTPDFLNKIKISGLPN 1322
Query: 130 HKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPI 188
H L LKVG PV+L+RNLD+ L NGTRLQ+ LG +V+ I+TG G+ V+IPR+P+
Sbjct: 1323 HLLWLKVGCPVMLLRNLDSHGGLMNGTRLQIVRLGDKLVQGRILTGTRVGKLVIIPRMPL 1382
Query: 189 IPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
P+D LPF+ KR QFPL +AFAMTINK+QGQ+L GI L K ++
Sbjct: 1383 TPSDRRLPFKMKRRQFPLSVAFAMTINKSQGQSLGNVGIYLPKPVF 1428
>At5g34960.1 68418.m04125 hypothetical protein includes At5g34960,
At2g14450, At1g35920
Length = 1033
Score = 159 bits (387), Expect = 1e-39
Identities = 95/226 (42%), Positives = 142/226 (62%), Gaps = 14/226 (6%)
Query: 18 LLKIGEDRMAKDGNGMITLDREFC--NVVHNPDDLNNFVYSE--LLTNMRNRDWLCERAI 73
+LKI E DG +I + + N + + N +Y + +L + + + RAI
Sbjct: 765 VLKINEPN---DGVAIIDIPEDLLITNTDKPIESITNEIYGDPKILHEITDPKFFQGRAI 821
Query: 74 LAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVT-SYPV---EFLNSLELSGVPS 129
LAPTNE V INE ++ ++ + +LS D++ T+ + + PV +FLNS++L+G+P+
Sbjct: 822 LAPTNEDVNTINEYLLEQLHAEERIYLSADSIDPTDSNSLNNPVITPDFLNSIKLAGLPN 881
Query: 130 HKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPI 188
H LRLKV PV+L+RNLD LCNGTRLQ+T L IV+A ++TG G VLIP + +
Sbjct: 882 HSLRLKVSAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDIIGHIVLIPTVNL 941
Query: 189 IPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
PTD LPF+ +R QFPL +AFAMTIN +QGQ+L+ G+ L K+++
Sbjct: 942 TPTDTKLPFKMRRRQFPLSVAFAMTINTSQGQSLEHVGLYLPKAVF 987
>At5g37110.1 68418.m04454 hypothetical protein
Length = 1307
Score = 159 bits (385), Expect = 2e-39
Identities = 91/228 (39%), Positives = 144/228 (63%), Gaps = 13/228 (5%)
Query: 13 QYAAALLKIGEDRMAK--DGNGMITLDREFC-NVVHNP-DDLNNFVYSELLTNMRNRD-- 66
+++ +L +G+ R+ + DG +I + EF +P + + +Y ++ D
Sbjct: 1040 EFSEWILAVGDGRIVEPNDGEALIVIPSEFLITKAKDPIEAICTEIYGDITKIHEQNDPI 1099
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV----MDTEQVTSYPVEFLNSL 122
+ E+AIL PTNE V QINE ++ ++G+ FLS D++ + + + +FLNS+
Sbjct: 1100 FFQEKAILCPTNEDVNQINETMLDNLQGEEFTFLSSDSLDPADIGGKNNPALTPDFLNSV 1159
Query: 123 ELSGVPSHKLRLKVGVPVLLMRNLDA-PRLCNGTRLQVTHLGRNIVKAIIMTGMAKGENV 181
++S +P+HKLRLK+G PV+L+RN+D L NGTRL++T +G I++A+I+TG G V
Sbjct: 1160 KVSRLPNHKLRLKIGCPVMLLRNIDPIGGLMNGTRLRITQMGPFILQAMILTGDRAGHLV 1219
Query: 182 LIPRIPIIPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINL 227
LIPR+ + P+D LPF+ +R Q PL + FAMTINK+QGQ+LK GI L
Sbjct: 1220 LIPRLKLAPSDTKLPFRMRRTQLPLAVCFAMTINKSQGQSLKRVGIFL 1267
>At3g13250.1 68416.m01668 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 1419
Score = 157 bits (381), Expect = 6e-39
Identities = 91/233 (39%), Positives = 146/233 (62%), Gaps = 13/233 (5%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLD---REFCNVVHNP-DDLNNFVYSE--LLTNMRNRD 66
+++ LL +G+ R+ + +G + +D NP + ++ +Y + L + +
Sbjct: 1142 EFSDWLLAVGDGRVNEPNDGEVIIDIPEELLIQEADNPIEAISREIYGDPTKLHEISDPK 1201
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV--MDTEQVTSYPV--EFLNSL 122
+ RAILAP NE V IN+ ++ ++ + +LS D++ D++ + + + +FLNS+
Sbjct: 1202 FFQRRAILAPKNEDVNTINQYMLEHLDSEERIYLSADSIDPSDSDSLKNPVITPDFLNSI 1261
Query: 123 ELSGVPSHKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGENV 181
++SG+P H LRLKVG PV+L+RNLD LCNGTRLQ+T L +IV+A ++TG G+ V
Sbjct: 1262 KVSGMPHHSLRLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCSHIVEAKVITGDRIGQIV 1321
Query: 182 LIPRIPIIPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
IP I I P+D LPF+ +R QFPL +AF MTINK+QGQ+L+ G+ L K ++
Sbjct: 1322 YIPLINITPSDTKLPFKMRRRQFPLSVAFVMTINKSQGQSLEQVGLYLPKPVF 1374
>At1g54430.1 68414.m06209 hypothetical protein
Length = 1639
Score = 157 bits (380), Expect = 8e-39
Identities = 95/241 (39%), Positives = 146/241 (60%), Gaps = 22/241 (9%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLDREFCNVV----------HNP-DDLNNFVYSELLTN 61
++A +L++G+ + +G I D+E N++ NP + L V+ +
Sbjct: 1348 KFAEWILQVGDGEAPRKTHG-IDDDQEEDNIIIDKNLLLPETENPLEVLCRSVFPDFTNT 1406
Query: 62 MRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVT------SYP 115
++ + L A+L P NE V +IN+ ++S+V G E+ S D++ E +T SYP
Sbjct: 1407 FQDLENLKGTAVLTPRNETVDEINDYLLSKVPGLAKEYFSADSIDRDEALTEEGFEMSYP 1466
Query: 116 VEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTG 174
+E+LNSLE G+P+H+L LKVGVP++L+RNL+ LCNGTRL VTHLG ++KA I++
Sbjct: 1467 MEYLNSLEFPGLPAHRLCLKVGVPIMLLRNLNQKEGLCNGTRLIVTHLGDKVLKAEILSD 1526
Query: 175 MAK-GENVLIPRIPIIPTDL--PFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSM 231
K + VLIPRI + P D PF +R QFP+++ +AMTINK+QGQTL + L K +
Sbjct: 1527 TTKERKKVLIPRIILSPQDSKHPFTLRRRQFPVRMCYAMTINKSQGQTLNRVALYLPKPV 1586
Query: 232 Y 232
+
Sbjct: 1587 F 1587
>At3g30420.1 68416.m03847 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 837
Score = 156 bits (379), Expect = 1e-38
Identities = 95/241 (39%), Positives = 145/241 (60%), Gaps = 22/241 (9%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLDREFCNVV----------HNP-DDLNNFVYSELLTN 61
++A +L+IG+ + +G I D+E N++ NP + L V +
Sbjct: 546 KFAEWILQIGDGEAPRKTHG-IDDDQEEDNIIIDKNLLLPETENPLEVLCQSVSPDFTNT 604
Query: 62 MRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVT------SYP 115
++ + L A+L P NE V +IN+ ++S+V G E+ S D++ E +T SYP
Sbjct: 605 FQDLENLKGTAVLTPRNETVDEINDYLLSKVPGLAKEYFSADSIDQDEALTEEGFEMSYP 664
Query: 116 VEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTG 174
+E+LNSLE G+P+H+L LKVGVP++L+RNL+ LCNGTRL VTHLG ++KA I++
Sbjct: 665 MEYLNSLEFPGLPAHRLCLKVGVPIMLLRNLNQKEGLCNGTRLTVTHLGDKVLKAEILSD 724
Query: 175 MA-KGENVLIPRIPIIPTDL--PFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSM 231
K + VLIPRI + P D PF +R QFP+++ +AMT+NK+QGQTL + L K +
Sbjct: 725 TTKKRKKVLIPRIILSPQDSKHPFTLRRRQFPVRMCYAMTVNKSQGQTLNRVALYLPKPV 784
Query: 232 Y 232
+
Sbjct: 785 F 785
>At3g51700.1 68416.m05669 expressed protein
Length = 344
Score = 152 bits (368), Expect = 2e-37
Identities = 90/242 (37%), Positives = 140/242 (57%), Gaps = 14/242 (5%)
Query: 4 QLHNDVQSGQYAAALLKIGEDRMAKDGNGMITLD-REFCNVVHNPDDLNNFV---YSELL 59
++H + + + IG + + K +G +D E + D + V Y E
Sbjct: 51 KIHTTIDEA-FTKWITNIGGENINKPNDGETKIDIHEDLLITECKDPIKTIVDEVYGESF 109
Query: 60 TNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTS----YP 115
T N D+ ERAIL TN++ +IN+ ++S+++G+ + DT+ T + YP
Sbjct: 110 TESYNPDFYQERAILCHTNDVADEINDYMLSQLQGEETKCYGADTIYPTHASPNDKMLYP 169
Query: 116 VEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPR--LCNGTRLQVTHLGRNIVKAIIMT 173
+EFLNS+++ G P KLRLKVG PV+L+R+L AP L GTRLQ+T + +++A+I+T
Sbjct: 170 LEFLNSIKIPGFPDFKLRLKVGAPVMLLRDL-APYGWLRKGTRLQITRVETFVLEAMIIT 228
Query: 174 GMAKGENVLIPRIP--IIPTDLPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSM 231
G GE VLIPRIP + P + +R QFP+K+AFAMTI+++Q QTL GI L + +
Sbjct: 229 GNNHGEKVLIPRIPSDLREAKFPIKMRRRQFPVKLAFAMTIDESQRQTLSKVGIYLPRQL 288
Query: 232 YY 233
+
Sbjct: 289 LF 290
>At1g64410.1 68414.m07301 hypothetical protein
Length = 1231
Score = 144 bits (350), Expect = 4e-35
Identities = 81/183 (44%), Positives = 115/183 (62%), Gaps = 11/183 (6%)
Query: 54 VYSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLS-VDTVMDTEQVT 112
VY ++ + RAIL PTNE V I R + V + DT +
Sbjct: 1016 VYGNTFMEEKDPKFFQGRAILCPTNEDVNSIK-----RAYDEYVRCIDPADT--SSANND 1068
Query: 113 SYPVEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAII 171
+Y +FLNS+ +SG+P+H LRLKVG P++L+RN+D + LCNGTRLQVT + +++A
Sbjct: 1069 AYSADFLNSVRVSGLPNHCLRLKVGCPIMLLRNMDPNKGLCNGTRLQVTQMADTVIQARF 1128
Query: 172 MTGMAKGENVLIPRIPIIPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEK 229
+TG G+ VLIPR+ I P+D LPF+ +R QFPL +AFAMTINK+QGQTL+ G+ L +
Sbjct: 1129 ITGNRVGKIVLIPRMLITPSDTRLPFKMRRRQFPLSVAFAMTINKSQGQTLESVGLYLPR 1188
Query: 230 SMY 232
++
Sbjct: 1189 PVF 1191
>At5g28780.1 68418.m03538 hypothetical protein various predicted
proteins, Arabidopsis thaliana
Length = 337
Score = 141 bits (342), Expect = 3e-34
Identities = 81/204 (39%), Positives = 121/204 (59%), Gaps = 12/204 (5%)
Query: 29 DGNGMITLDREFCNVVHNPDDLNNFV---YSELLTNMRNRDWLCERAILAPTNEMVGQIN 85
D ++ +D F + HN + L Y + + N +L ER IL P NE V +IN
Sbjct: 74 DDGEVVEMDTSFF-LKHNGNRLQQVTKGAYVQFSVSQPNFQYLTERGILTPHNEYVDEIN 132
Query: 86 EQIMSRVEGDIVEFLSVDTVMDTEQVTS-----YPVEFLNSLELSGVPSHKLRLKVGVPV 140
++S+V GD E+LS ++ + + + Y V++LNSLE +P HK+ LK GVP+
Sbjct: 133 AYMLSQVGGDSKEYLSSYSIGKADTIGADYEALYHVKYLNSLEFPSLPKHKISLKKGVPI 192
Query: 141 LLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIP--TDLPFQF 197
+ MRN + LCNGTRL VT+LG +++A I+TG G+ V IPR + P ++ PF
Sbjct: 193 MQMRNFNQKEGLCNGTRLIVTNLGEQVIEAQIVTGTHAGKMVSIPRFILSPPQSEHPFTL 252
Query: 198 KRLQFPLKIAFAMTINKAQGQTLK 221
+R QFP+++ +AMTI K QGQ+LK
Sbjct: 253 RRQQFPMRVCYAMTIIKNQGQSLK 276
>At2g05080.1 68415.m00530 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 1238
Score = 114 bits (275), Expect = 4e-26
Identities = 71/187 (37%), Positives = 115/187 (61%), Gaps = 15/187 (8%)
Query: 13 QYAAALLKIGEDRMAK--DGNGMITLDREFCNVVHNPDDLNNF---VYSELLTNMRNRD- 66
+++ +L +G+ R+ + DG +I + EF + D + +Y ++ +D
Sbjct: 1053 EFSEWILAVGDGRIGEPNDGEALIDIPSEFL-ITKAKDPIQAICTEIYGDITKIHEQKDP 1111
Query: 67 -WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSY--PV---EFLN 120
+ ERAIL PTNE V QINE ++ ++G+ + FLS D+ +DT + S PV EFLN
Sbjct: 1112 VFFQERAILCPTNEDVNQINETMLDNLQGEELTFLSSDS-LDTADIGSRNNPVLTPEFLN 1170
Query: 121 SLELSGVPSHKLRLKVGVPVLLMRNLD-APRLCNGTRLQVTHLGRNIVKAIIMTGMAKGE 179
++++ G+ +HKLRLK+G PV+L+RN+D L NGTRLQ+ + I++A+I+TG G+
Sbjct: 1171 NVKVLGLSNHKLRLKIGSPVMLLRNIDPIGGLMNGTRLQIMQMSPFILQAMILTGDRAGQ 1230
Query: 180 NVLIPRI 186
VLIPR+
Sbjct: 1231 LVLIPRL 1237
>At3g43350.1 68416.m04582 helicase-related low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 830
Score = 104 bits (250), Expect = 5e-23
Identities = 51/100 (51%), Positives = 73/100 (73%), Gaps = 3/100 (3%)
Query: 136 VGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTD-- 192
+G PV+L+RN+D + LCNGTRLQVT + +++A +TG G+ VLIPR+ I P+D
Sbjct: 594 IGCPVMLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPSDTR 653
Query: 193 LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
LPF+ +R QF L +AFAMTINK+QGQTL+ G+ L + ++
Sbjct: 654 LPFKMRRKQFALSVAFAMTINKSQGQTLESVGLYLPRPVF 693
Score = 104 bits (249), Expect = 6e-23
Identities = 52/100 (52%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
Query: 136 VGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTD-- 192
VG PV+L+RN+D + LCNGTRLQVT + +++A +TG G+ VLIPR+ I P D
Sbjct: 710 VGCPVMLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPLDTR 769
Query: 193 LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
LPF+ +R QF L +AFAMTINK+QGQTL+ G+ L + ++
Sbjct: 770 LPFKMRRKQFALSVAFAMTINKSQGQTLESVGLYLPRPVF 809
Score = 96.7 bits (230), Expect = 1e-20
Identities = 64/174 (36%), Positives = 103/174 (59%), Gaps = 16/174 (9%)
Query: 18 LLKIGEDRMAK--DGNGMITLDREFC-NVVHNP-DDLNNFVYSELLTNMRN---RDW--L 68
+L +G+ ++++ DG +I + EF N ++P + + VY ++ D+
Sbjct: 382 ILDVGDGKISQPNDGIALIDIPEEFLINGDNDPVESIIEAVYGNTFMEEKDPKKTDYPQY 441
Query: 69 CERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTS-----YPVEFLNSLE 123
RAIL PTNE V INE +M ++G+ +LS D++ D ++S Y +FLN++
Sbjct: 442 QGRAILCPTNEDVNSINEHMMRMLDGEERIYLSSDSI-DPADISSANNAAYLADFLNNVR 500
Query: 124 LSGVPSHKLRLKVGVPVLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMA 176
+ G+P+H LRLKVG PV+L+RN+D + LCNGTRLQVT + I++A +T A
Sbjct: 501 VYGLPNHCLRLKVGCPVMLLRNMDPNKGLCNGTRLQVTQMTDTIIQARFITAFA 554
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 207 AFAMTINKAQGQTLKVAGINLEKSMY 232
AFAMTINK+QGQTL+ G+ L + ++
Sbjct: 552 AFAMTINKSQGQTLESVGLYLPRPVF 577
>At3g51690.1 68416.m05668 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 374
Score = 103 bits (246), Expect = 1e-22
Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 26/182 (14%)
Query: 54 VYSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTS 113
VY E N D+ + AIL ++ V QIN+ ++S + G+ E LS D++ +
Sbjct: 103 VYGEYFAKSYNPDFCHDSAILCHRDDDVDQINDYMLSLLPGEEKECLSTDSISPSPNDDM 162
Query: 114 Y-PVEFLNSLELSGVPSHKLRLKVGVPVLLMRNLDAPRLCNGTRLQVTHLGRNIVKAIIM 172
+ P+E LNS+++ G+P KLRLKVG PV+L+R+LD R
Sbjct: 163 FVPLEVLNSIKVPGLPDFKLRLKVGAPVMLLRDLDPSR---------------------- 200
Query: 173 TGMAKGENVLIPRIPIIPTD--LPFQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKS 230
G G+ + IPRI PT+ P Q +R Q+PLK+AFAMTI+++Q TL G+ L +
Sbjct: 201 -GNKHGKKIWIPRIASYPTETNFPLQMRRTQYPLKLAFAMTIDESQVHTLSKVGLYLPRQ 259
Query: 231 MY 232
++
Sbjct: 260 VF 261
Score = 35.9 bits (79), Expect = 0.024
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 158 QVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTDLPFQFKRLQFPLKIAFAMTINKAQG 217
QV GR + AI G VLI P Q + +P +AFAMTI++++G
Sbjct: 259 QVFSHGRQMFVAISKVKSRAGLKVLITDKDGNP-----QEEAKNYPFTLAFAMTIDQSRG 313
Query: 218 QTLKVAGINLEKSMYY 233
QT G+ L K +++
Sbjct: 314 QTFSKVGLYLPKQVFF 329
>At5g32070.1 68418.m03689 hypothetical protein
Length = 339
Score = 86.6 bits (205), Expect = 1e-17
Identities = 56/158 (35%), Positives = 95/158 (60%), Gaps = 23/158 (14%)
Query: 81 VGQINEQIMSRVEGDIVEFLSVDTV--MDTEQVTSYPV--EFLNSLELSGVPSHKLRLKV 136
+ Q ++ +++ +G+ +LS D++ D++ + + + +FLNS++LSG+ H L LKV
Sbjct: 144 IQQFSDWLLAIGDGEERIYLSADSIDPTDSDSLANSVITPDFLNSIKLSGLAHHALCLKV 203
Query: 137 GVPVLLMRNLDAPRLCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTD--LP 194
G P T+ Q+T + +V+ ++TG GE VLIP I + P+D LP
Sbjct: 204 GAP--------------ATKTQLT---KQVVQVRVITGDRIGEIVLIPLINLTPSDMKLP 246
Query: 195 FQFKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
F+ +R QF L +AFA+TINK+QGQ+L+ G+ L K ++
Sbjct: 247 FKMRRRQFSLSVAFAITINKSQGQSLEQVGLYLPKPVF 284
>At4g03690.1 68417.m00504 hypothetical protein very low similarity
to SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 570
Score = 85.0 bits (201), Expect = 4e-17
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Query: 140 VLLMRNLDAPR-LCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTD--LPFQ 196
++L+RNLD L NGTRLQ+ LG +V+ +TG G+ VLI +P+ P+ LPF+
Sbjct: 429 IMLLRNLDLHGGLMNGTRLQIVRLGDKLVQGRPLTGTRVGKLVLILMMPLTPSAHRLPFK 488
Query: 197 FKRLQFPLKIAFAMTINKAQGQTLKVAGINLEKSMY 232
+R QFPL +AFAM INK+Q Q+L GINL K ++
Sbjct: 489 MRRKQFPLSVAFAMMINKSQRQSLANVGINLLKPVF 524
>At3g42340.1 68416.m04375 hypothetical protein various predicted
Helicases, Arabidopsis thaliana
Length = 244
Score = 49.6 bits (113), Expect = 2e-06
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 18 LLKIGEDRMAKDGNGMITLD-RE--FCNVVHNP-DDLNNFVYSELLTNMRNRDWLCERAI 73
+L +G+ ++++ G+ +D RE F N ++P + + VY ++R + R I
Sbjct: 96 ILDVGDGKISQCNEGISLIDIREEFFINGDNDPVESIIEAVYGNTFMEEKDRKFFQGRVI 155
Query: 74 LAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV--MDTEQVT--SYPVEFLNSLELSGVPS 129
L PTNE V INE +MS ++G+ +LS +++ DT +Y +F + P
Sbjct: 156 LCPTNEDVNSINEHMMSMLDGEERIYLSSNSIDPADTSSANNDAYSADFFKQ---NMDPH 212
Query: 130 HKLRLKV 136
H LR KV
Sbjct: 213 HTLRYKV 219
>At2g39360.1 68415.m04831 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 815
Score = 31.5 bits (68), Expect = 0.53
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 40 FCNVVHNPDDLNNFVYSELLTNMRNRDWLCERAILAPTNE---MVGQINEQIMSRVEGDI 96
FCN++ +P + ++ N + +L T V + + SR EG +
Sbjct: 296 FCNIIVDPFGFERQIRFDIFVNSEKVRTIDMTEVLNGTFGAPFFVDAVMRKAKSR-EGFL 354
Query: 97 VEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSHKLRL 134
LS+ VMD V+SYPV F+N E+S + + K L
Sbjct: 355 N--LSIGLVMD---VSSYPVSFINGFEISKLSNDKRSL 387
>At2g29620.1 68415.m03598 expressed protein
Length = 747
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 142 LMRNLDAPRLCNGTRLQVTHLGRNIVKAIIMTGMAKGENVLIPRIPIIPTDLPF 195
LM +++ PR+C G G + ++M G A +VL+PR P DLP+
Sbjct: 270 LMDDMEVPRICIGRNFYGFDKGNYEIDGLVMPGSA--PSVLLPRRN--PFDLPY 319
>At5g62110.1 68418.m07796 hypothetical protein
Length = 691
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 4/130 (3%)
Query: 2 RVQLHNDVQSGQYAAAL-LKIGEDRMAKDGNGMITLDREFCNVVHNPDDLNNFVYSELLT 60
RV ++ +V GQ ++ E+ M+ G+ F + N +EL+
Sbjct: 300 RVNVNGNVSLGQNLGSMNWNFDENNMSNHGSSTSRFSSPFSSFEDQSLSHLNEETNELVP 359
Query: 61 NMRNRDWLCERAILAPT--NEMVGQ-INEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVE 117
+ N + + P N + + Q V + +EF + D + E +T+Y VE
Sbjct: 360 GLENLSLYNDHQSINPFLGNTINSHFVENQDQGLVNNENLEFANDDQLERNEILTTYSVE 419
Query: 118 FLNSLELSGV 127
+N+L ++ V
Sbjct: 420 DINNLSINNV 429
>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
protein contains Pfam profile PF00169: PH domain
Length = 1322
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 78 NEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSHKLRLKVG 137
N + ++ E M V D S V +Q+T F S E+ G P+ KL L +
Sbjct: 1207 NRFIQEVAEYFMGLVPSD-----SKGVVKMKDQITDSEKWFTTS-EIEGSPALKLDLSLK 1260
Query: 138 VPVLLM-RNLDAPRLCNGTRLQVTHL 162
P+++M R+ D+P + +L + H+
Sbjct: 1261 KPIIVMPRHTDSP---DYLKLDIVHI 1283
>At1g25360.1 68414.m03146 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 790
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLDREFCNVV 44
QY A LLKIG D GN +IT+ + C VV
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAK-CGVV 468
>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646; supporting cDNA
gi|13160645|dbj|AB036832.1|;
Length = 876
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 48 DDLNNFVYSELLTNMRNRD--WLCERAILAPTNEMV-GQINEQIMSRVEGDIVEFLSVDT 104
DDL + +L + D + + L P +++V GQI Q+ R EG + +VD
Sbjct: 274 DDLTGTIEQDLEKGGKTADIVMIDQEKDLPPASKLVDGQITSQVDERGEGRRLAPSAVDN 333
Query: 105 VMDTEQVTSYPVEFLNSLELSGVPSHKLRLK 135
+ E VT+ + S L+ P+ + + K
Sbjct: 334 LQTAEVVTNVDNQLEASSSLTTGPATEKKRK 364
>At1g04780.1 68414.m00474 ankyrin repeat family protein contains
Pfam PF00023: Ankyrin repeat
Length = 664
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/113 (17%), Positives = 43/113 (38%)
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSG 126
W L T + +I E ++ F+S DT ++ + L+G
Sbjct: 136 WCRRLPRLVATMHRMRDFYMEITFHFESSVIPFISRVAPSDTYKIWKRGANLRADMTLAG 195
Query: 127 VPSHKLRLKVGVPVLLMRNLDAPRLCNGTRLQVTHLGRNIVKAIIMTGMAKGE 179
+++ + L + ++ +G+ L ++H + I+ A+ G A E
Sbjct: 196 FDGFRIQRSDQTILFLGDGSEDGKVPSGSLLMISHKDKEIMNALDGAGAAASE 248
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.137 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,178,644
Number of Sequences: 28952
Number of extensions: 208286
Number of successful extensions: 498
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 412
Number of HSP's gapped (non-prelim): 35
length of query: 240
length of database: 12,070,560
effective HSP length: 79
effective length of query: 161
effective length of database: 9,783,352
effective search space: 1575119672
effective search space used: 1575119672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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