GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001819-TA|BGIBMGA001819-PA|undefined
         (188 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_37524| Best HMM Match : p450 (HMM E-Value=0)                        30   1.4  
SB_25436| Best HMM Match : 7tm_1 (HMM E-Value=9.49996e-41)             29   1.8  
SB_45260| Best HMM Match : RVT_1 (HMM E-Value=1.2)                     29   2.4  
SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.5  
SB_3976| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.5  
SB_33313| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.3  
SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   7.3  
SB_19150| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  
SB_20238| Best HMM Match : Toxin_8 (HMM E-Value=0.66)                  27   9.6  

>SB_37524| Best HMM Match : p450 (HMM E-Value=0)
          Length = 362

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 101 YKEIIKFYKLEKIREELDTLLKRSKDGEKWEKT 133
           Y+E +K +  E IR+  D LLK  +D E+ +K+
Sbjct: 115 YQEHVKTFDPENIRDYTDALLKAKQDAEQEDKS 147


>SB_25436| Best HMM Match : 7tm_1 (HMM E-Value=9.49996e-41)
          Length = 321

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 14/28 (50%), Positives = 22/28 (78%), Gaps = 3/28 (10%)

Query: 148 IELLEPFFSNGHVCLCTVLFVGLTQFIV 175
           +EL++P F+  HV LCTVLF+G+  F++
Sbjct: 164 LELVQPEFT--HV-LCTVLFLGVAPFLI 188


>SB_45260| Best HMM Match : RVT_1 (HMM E-Value=1.2)
          Length = 584

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)

Query: 20  PMPHLKVHKTGPIQGHRKYHAKHGKTNSGPLDSLIFVGILRIAICSKEKKLT---TLLRD 76
           P+P    +  G  Q HRKY A H K+    +++  FV     A   K K+L    T+ R 
Sbjct: 96  PLPGPTTNNYGE-QQHRKYSASHLKSLRNAMNNSAFVS-TNTAFIDKVKRLNILRTINRY 153

Query: 77  SPNIC 81
           S N C
Sbjct: 154 SDNYC 158


>SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3307

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 10/148 (6%)

Query: 18   AGPMPHLKVHKTGPIQGH-RKYHAKHGKTNSGPLDSLIFVGILRIAICSKEKKLTTLLRD 76
            A P P+++V     ++G    Y  +    +  P+  ++F  I ++   S + +   +L  
Sbjct: 1041 ADPKPYVEVEDLDKLRGVVENYLDEFNNMSKKPMTLVLFRYIQQVQCISYKLEAPNVLAQ 1100

Query: 77   --SPNICHPEFGTKWGWSKLTGKFESYKEIIKFYKLEKIREELDTLLKRSKDGEKWEKTE 134
              S N+  P+  +K     +T  +    EI K Y   + RE++  +L+++ +GE    T 
Sbjct: 1101 KVSRNLNLPKSFSKRSLFPIT-MYLFQVEIGKGYTSTEWREDIKAILRKTAEGE----TN 1155

Query: 135  GSSKFIITTVR--SLIELLEPFFSNGHV 160
            G   F  T ++  S +E +    + G V
Sbjct: 1156 GVFLFTDTQIKEESFLEDINNLLNAGEV 1183


>SB_3976| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 730

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 82  HPEFGTKWGWSKLTGKFESYKEIIKFYKLEKIREELDTLLKRSKDGEKWEK 132
           HP +  +     L  +++  + I+ ++    IRE + TL+ R +   KW+K
Sbjct: 616 HPSWSIRRHKKNLRKRYQFVQTIVNYFWRRFIREYVPTLISRGR--SKWQK 664


>SB_33313| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 107

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 162 LCTVLFVGLTQFIVNQLRKKVL 183
           LCT LF GL  F++  + K+VL
Sbjct: 14  LCTALFYGLCSFLIVVVNKRVL 35


>SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1400

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 110 LEKIREELDTLLKRSKDGEKWEKTEGSSKFIITTVRSLIEL 150
           LEK    L   +K  +D EK  K E S K ++T  + +++L
Sbjct: 893 LEKRYHLLKNKVKELEDREKISKQEKSDKLVVTLRKRIVDL 933


>SB_19150| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 537

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)

Query: 97  KFESYK-EIIKFYKLEKIREELD-TLLKRSKDGEKWEK 132
           K E  K E++K    E +  EL+ TL+KR+KDG++  K
Sbjct: 218 KTEKQKDEMLKDISQEALDSELEETLIKRAKDGDRLAK 255


>SB_20238| Best HMM Match : Toxin_8 (HMM E-Value=0.66)
          Length = 491

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 146 SLIELLEPFFSNGHVCLCTVLFVGLTQFIVNQLR 179
           +LI +L P + NG  C  T L V  T  + N+ R
Sbjct: 50  ALIVVLRPRYENGKTCNHTALCVANTHLLFNKKR 83


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.323    0.140    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,306,075
Number of Sequences: 59808
Number of extensions: 254372
Number of successful extensions: 616
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 612
Number of HSP's gapped (non-prelim): 9
length of query: 188
length of database: 16,821,457
effective HSP length: 78
effective length of query: 110
effective length of database: 12,156,433
effective search space: 1337207630
effective search space used: 1337207630
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)