Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001817-TA|BGIBMGA001817-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(622 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g54610.1 68416.m06042 histone acetyltransferase (GCN5) nearly... 41 0.003
At2g22795.1 68415.m02704 expressed protein 36 0.061
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 36 0.080
At5g53430.1 68418.m06640 PHD finger family protein / SET domain-... 33 0.43
At5g17160.1 68418.m02010 expressed protein 33 0.43
At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive eff... 33 0.43
At3g52100.1 68416.m05717 PHD finger family protein contains Pfam... 33 0.56
At3g48050.2 68416.m05239 bromo-adjacent homology (BAH) domain-co... 33 0.56
At3g48050.1 68416.m05238 bromo-adjacent homology (BAH) domain-co... 33 0.56
At1g42440.1 68414.m04894 expressed protein contains Pfam domain,... 33 0.56
At5g03360.1 68418.m00289 DC1 domain-containing protein contains ... 33 0.75
At3g48060.1 68416.m05240 bromo-adjacent homology (BAH) domain-co... 33 0.75
At2g17600.1 68415.m02036 DC1 domain-containing protein contains ... 33 0.75
At5g58130.1 68418.m07273 RNA recognition motif (RRM)-containing ... 32 0.99
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 32 0.99
At3g09560.2 68416.m01136 lipin family protein contains Pfam prof... 32 1.3
At3g09560.1 68416.m01135 lipin family protein contains Pfam prof... 32 1.3
At3g01370.1 68416.m00059 expressed protein contains Pfam domain,... 32 1.3
At1g34355.1 68414.m04265 forkhead-associated domain-containing p... 32 1.3
At1g12830.1 68414.m01490 expressed protein 31 1.7
At5g19900.1 68418.m02368 PRLI-interacting factor, putative stron... 31 2.3
At3g50550.1 68416.m05528 expressed protein isoform contains a n... 31 2.3
At5g40110.1 68418.m04865 hypothetical protein 31 3.0
At4g25280.1 68417.m03636 adenylate kinase family protein contain... 31 3.0
At4g18020.3 68417.m02683 pseudo-response regulator 2 (APRR2) (TO... 31 3.0
At4g18020.2 68417.m02682 pseudo-response regulator 2 (APRR2) (TO... 31 3.0
At4g18020.1 68417.m02681 pseudo-response regulator 2 (APRR2) (TO... 31 3.0
At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P... 30 4.0
At4g10930.1 68417.m01778 expressed protein 30 4.0
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 30 4.0
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 30 5.3
At1g64385.1 68414.m07297 expressed protein 30 5.3
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 29 7.0
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 29 7.0
At4g08750.1 68417.m01443 RNA recognition motif (RRM)-containing ... 29 7.0
At2g16485.1 68415.m01889 expressed protein ; expression supporte... 29 7.0
At3g53310.1 68416.m05881 transcriptional factor B3 family protei... 29 9.2
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 29 9.2
At1g77250.1 68414.m08997 PHD finger family protein contains Pfam... 29 9.2
At1g65140.1 68414.m07385 ubiquitin carboxyl-terminal hydrolase f... 29 9.2
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 29 9.2
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 29 9.2
>At3g54610.1 68416.m06042 histone acetyltransferase (GCN5) nearly
identical to histone acetyltransferase GCN5 [Arabidopsis
thaliana] GI:13591696; contains Pfam profiles PF00583:
acetyltransferase, GNAT family, PF00439: Bromodomain
Length = 568
Score = 40.7 bits (91), Expect = 0.003
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 460 DDAIVHNDELTDRNSDSAQFDNGVDVS--VISEKDTNEVELSVNENSAMITCNGAVTDSS 517
D A+ NDEL ++ A D+ D S ++ + D +E +++S++ T A DSS
Sbjct: 71 DGALTSNDELESISARGADTDSDPDESEDIVVDDDEDEFAPEQDQDSSIRTFTAARLDSS 130
Query: 518 TGIDSAVINSKVYEKSNSFDIET 540
+G++ + N+K+ +S++ +E+
Sbjct: 131 SGVNGSSRNTKLKTESSTVKLES 153
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 36.3 bits (80), Expect = 0.061
Identities = 48/264 (18%), Positives = 97/264 (36%), Gaps = 20/264 (7%)
Query: 362 NNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLDRDEEN 421
N T K+++S L + +E + +S + + + E + N +D+EN
Sbjct: 485 NEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKEN 544
Query: 422 RLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDN 481
++ KE++ + + +T S E TK ++ I + + + +
Sbjct: 545 EKIE-KEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEK 603
Query: 482 GVDVSVISEKDTNEVELSVNENSAMITCNGAVTDSSTGIDSAVINSKVYEKSNSFDIETL 541
S+++T E E E +SS+ +N++ +K +E
Sbjct: 604 IEKEESASQEETKEKETETKEKE----------ESSSNESQENVNTESEKKEQ---VEEN 650
Query: 542 LNKTXXXXXXXXXXRNASPFAQQIGDNQFEINEKTDCEVTGEPEHCSKSADQNDKINIED 601
KT + S Q+ + E +EK + GE E + +D + N+
Sbjct: 651 EKKTDEDTSESSKENSVSDTEQKQSE---ETSEKEESNKNGETEVTQEQSDSSSDTNLPQ 707
Query: 602 LLDGKRMELD---DTSNDDFNFDV 622
+ R +L+ D+ N N V
Sbjct: 708 EVKDVRTDLETLPDSGNGGSNESV 731
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 35.9 bits (79), Expect = 0.080
Identities = 26/126 (20%), Positives = 53/126 (42%)
Query: 359 DSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLDRD 418
D D + + TS+ AKPK+ ++ A +++++ E + N D + +
Sbjct: 218 DQDEDEEAGDDIDTSSEEAKPKVLKSCNSNADEVAENSSDEDEPKVLKTNNSKADKDEDE 277
Query: 419 EENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQ 478
EEN DD+ + A+ + S + + S E T + + ++ + N D+
Sbjct: 278 EENETSDDEAEPKALKLSNSNSDNGENNSSDDEKEITISKITSKKIKSNTADEENGDNED 337
Query: 479 FDNGVD 484
+ VD
Sbjct: 338 GEKAVD 343
>At5g53430.1 68418.m06640 PHD finger family protein / SET
domain-containing protein (TX5) contains Pfam domain,
PF00628: PHD-finger and PF00856: SET domain; identical
to cDNA trithorax 5 (TX5) partial cds GI:16118406
Length = 1043
Score = 33.5 bits (73), Expect = 0.43
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 178 CDACRVWFVDSIEAARHKQLHTSGSLPYKCHRCTAEY 214
CD C+VW + + HK G Y C C ++
Sbjct: 434 CDGCKVWIHSACDQISHKHFKDLGETDYYCPTCRTKF 470
>At5g17160.1 68418.m02010 expressed protein
Length = 569
Score = 33.5 bits (73), Expect = 0.43
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 380 KLSNEIEAHGKSDAFDAANDSEF-----DISSNINCIIDGLDRDEENRLV---DDKEKSD 431
K++ ++E DA AN E D + N ++ +D++EE + +K+D
Sbjct: 232 KIAGDLEVIVVMDANTEANKEEMNEVTADKKESENSLVQ-VDKEEETLQAICEEGPKKND 290
Query: 432 AVIDFDCRSIDTDAGSLSLLDET-TKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSVISE 490
+ I D + LL+ T+T NDD N DR+ D + ++ I E
Sbjct: 291 NDQEIGDLVIYVDVSDIPLLESAITETHNDDNESKNVLAIDRSVDQQETEHA-----IQE 345
Query: 491 KDTNEVELSVNENSAMITCNGAVTDSSTGIDSAVINSKVYEKSNSFDIETLLNKT 545
D E E VN+ + DS T + N EK N+FD ET++++T
Sbjct: 346 NDA-EPETKVNQTDS------DAGDSKTK-QAIQENDSEPEKINNFDEETMVDQT 392
>At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1311
Score = 33.5 bits (73), Expect = 0.43
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 444 DAGSLSLLDETT-KTMNDDAIVHNDELTDRNSDSAQFDN---GVDVSVISEKDTNEVELS 499
D GSL T+ K ND +E S+ DN D S ++EKD + L
Sbjct: 92 DEGSLEEAKVTSLKVPNDVGAPEREEGEWTESEVPANDNVHSSSDYSTVTEKDNGTLGLD 151
Query: 500 VNENSAMITCNGAVTDSSTGIDSAVINS 527
+N +SA+ N S+G DS I+S
Sbjct: 152 INSDSALQKKNVNHISESSGKDSGSIDS 179
>At3g52100.1 68416.m05717 PHD finger family protein contains Pfam
profile PF00628: PHD-finger
Length = 696
Score = 33.1 bits (72), Expect = 0.56
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 176 LACDACRVWF---VDSIEAARHKQLHTSGSLPYKCHRCTAE 213
+ CD C+ W D I ++ Q G+L YKC C E
Sbjct: 315 VCCDFCQRWVHCQCDGISDEKYMQFQVDGNLQYKCSTCRGE 355
>At3g48050.2 68416.m05239 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 33.1 bits (72), Expect = 0.56
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
Query: 359 DSDNNSNGT-SKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLDR 417
+S++NS+G + K K+ N+ SD+ + D + D+ S +C D R
Sbjct: 883 ESNDNSDGVVASPALPTKAVKEKILND------SDSGEL-KDIKTDVKSEADCTSDSTKR 935
Query: 418 DEENRL-----VDDKEKSDAVIDFDCRSIDTDAGS----LSLLDETTKTMNDDAIVHNDE 468
+ L V K S AV +D D +L E K + +D V +
Sbjct: 936 VASSMLTECRDVSKKVDSVAVEQTPLEGVDDDKKEEKPPTALSSELVKKVEEDVPVSSGI 995
Query: 469 LTDRNSDS-----AQFDNGVDVSVISEKDTNEVELSVNENSAMITCNGAVTDSSTGIDSA 523
D ++ S + N V + + +KD +++ + T GA+ D+S G+DS+
Sbjct: 996 SRDMDAVSIGRPITEMVNNVAFNHMDQKDVKKIKQDCD------TSVGAIKDTSAGLDSS 1049
Query: 524 VINSKV 529
V KV
Sbjct: 1050 VTKGKV 1055
>At3g48050.1 68416.m05238 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 33.1 bits (72), Expect = 0.56
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
Query: 359 DSDNNSNGT-SKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLDR 417
+S++NS+G + K K+ N+ SD+ + D + D+ S +C D R
Sbjct: 883 ESNDNSDGVVASPALPTKAVKEKILND------SDSGEL-KDIKTDVKSEADCTSDSTKR 935
Query: 418 DEENRL-----VDDKEKSDAVIDFDCRSIDTDAGS----LSLLDETTKTMNDDAIVHNDE 468
+ L V K S AV +D D +L E K + +D V +
Sbjct: 936 VASSMLTECRDVSKKVDSVAVEQTPLEGVDDDKKEEKPPTALSSELVKKVEEDVPVSSGI 995
Query: 469 LTDRNSDS-----AQFDNGVDVSVISEKDTNEVELSVNENSAMITCNGAVTDSSTGIDSA 523
D ++ S + N V + + +KD +++ + T GA+ D+S G+DS+
Sbjct: 996 SRDMDAVSIGRPITEMVNNVAFNHMDQKDVKKIKQDCD------TSVGAIKDTSAGLDSS 1049
Query: 524 VINSKV 529
V KV
Sbjct: 1050 VTKGKV 1055
>At1g42440.1 68414.m04894 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 793
Score = 33.1 bits (72), Expect = 0.56
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 413 DGLDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTD 471
D D D+ ++D E S+ +D + + D SL+L D T+T N+ +V +++LT+
Sbjct: 404 DNGDSDDNGMVLDRGEDSNQEGMYD-QEFEDDGKSLNLRDIDTETQNESEMVDDEDLTE 461
>At5g03360.1 68418.m00289 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1610
Score = 32.7 bits (71), Expect = 0.75
Identities = 15/36 (41%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 327 VKTEPV-LKNDNMVNITQDITDVFDSDTEISRWDSD 361
V+TE + + N+ V +T++ TDVFD TE++ W+S+
Sbjct: 851 VQTEELKITNNQQVPLTEE-TDVFDGYTEVTNWESE 885
>At3g48060.1 68416.m05240 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1611
Score = 32.7 bits (71), Expect = 0.75
Identities = 49/212 (23%), Positives = 81/212 (38%), Gaps = 19/212 (8%)
Query: 330 EPVLKNDNMVNITQDITDVFDSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHG 389
E +KN++ T D +SDTE + D S + + A P L ++
Sbjct: 851 ESEIKNESK---TGDRVKSSNSDTEDLQRFVDQRLE--SNENSDGVVASPPLPTKVIKEN 905
Query: 390 KSDAFDAAN--DSEFDISSNINCIIDGLDRDEENRLVDDKEKSD-----AVIDFDCRSID 442
D D+ D + D+ S +C D R + L + ++ S AV +D
Sbjct: 906 ILDDSDSGEVKDIKTDVKSEADCTSDLTKRVASSMLTECRDVSKMVDSVAVEHTPLEGVD 965
Query: 443 TDAGS----LSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEVEL 498
D +L E K + +D V + R D+ D + V + + +
Sbjct: 966 DDKKEEKPPTALSSELVKKVEEDVPVSSG--ISRGMDAVSIDRPITEMVNNIAFNHMDQK 1023
Query: 499 SVNE-NSAMITCNGAVTDSSTGIDSAVINSKV 529
+ + T GAV D+S G+DS+V KV
Sbjct: 1024 DIKKIKQDFDTSVGAVKDASAGLDSSVTKGKV 1055
>At2g17600.1 68415.m02036 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 580
Score = 32.7 bits (71), Expect = 0.75
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 171 SKKVRLACDACRVWFVDSIEAARHKQLHTSGSLPYKCHRC-TAEYKLVTTYDEHFKNDCI 229
S+K ++CD C+ DS+ + Q T S C+RC T Y+L YD H + C
Sbjct: 416 SRKGNISCDGCK----DSVRDEYYLQC-TICSFAM-CYRCATIPYELYYKYDAHLLSLCY 469
Query: 230 PFDEVPDVKCEDC 242
D CE C
Sbjct: 470 GEDAEKAYWCEVC 482
>At5g58130.1 68418.m07273 RNA recognition motif (RRM)-containing
protein
Length = 748
Score = 32.3 bits (70), Expect = 0.99
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 411 IIDGLDRDEENRLVDDKEK--SDAVIDFD-CRSIDTDAGSLSLLDETTKTMNDDAIVHND 467
+ D + RD+ + + DD E+ SDAV + C S+ D S S+ + +D +
Sbjct: 393 VSDDIKRDDSDTMADDIERDDSDAVEYYTACESMADDTASDSVAERDDSDAVEDDTAIDS 452
Query: 468 ELTDRNSDS-AQFDNGVDVSVISEKDTNEVELSVNENSAMITCNGAVTDSSTGIDS 522
D SDS A+ D+G +V ++ + + NS + +G + T IDS
Sbjct: 453 MADDPASDSVAESDDG--DAVENDTAIDSMADDTVSNSMAESDDGDNVEDDTAIDS 506
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 32.3 bits (70), Expect = 0.99
Identities = 20/84 (23%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 413 DGLDRDEENR-LVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTD 471
D +D EE + V+++E+ D +++ D ++ + ++ ++ + M D ++ E+TD
Sbjct: 65 DDMDETEEVKPKVEEEEEEDEIVESD---VELEGDTVEPDNDPPQKMGDSSV----EVTD 117
Query: 472 RNSDSAQFDNGVDVSVISEKDTNE 495
N ++AQ G + +SE + +E
Sbjct: 118 ENREAAQEAKGKAMEALSEGNFDE 141
>At3g09560.2 68416.m01136 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 904
Score = 31.9 bits (69), Expect = 1.3
Identities = 32/162 (19%), Positives = 69/162 (42%), Gaps = 12/162 (7%)
Query: 359 DSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLDRD 418
D S+ T+ + + + A N++++H + +A ++D+E D+ +C L++
Sbjct: 251 DKVEESSDTANIASDKVDAINDERNDLDSHSRDNAEKDSHDAERDLLG--SC----LEQS 304
Query: 419 EENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQ 478
E + ++ + + F+ R++ L + E ++ ++ I D L D S
Sbjct: 305 ELTKTSENVKSEEPGPTFEDRNLKEGEFPLRTIMENDRSEDEVTIESIDTLVDSFESST- 363
Query: 479 FDNGVDVSVISEKDTNEVELSVNENSAMITCNGAVTDSSTGI 520
+++ K T +SV+ N A C T + T I
Sbjct: 364 ----TQITIEEVKTTEGSRISVDSN-ADSECKDEQTSAETAI 400
>At3g09560.1 68416.m01135 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 904
Score = 31.9 bits (69), Expect = 1.3
Identities = 32/162 (19%), Positives = 69/162 (42%), Gaps = 12/162 (7%)
Query: 359 DSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLDRD 418
D S+ T+ + + + A N++++H + +A ++D+E D+ +C L++
Sbjct: 251 DKVEESSDTANIASDKVDAINDERNDLDSHSRDNAEKDSHDAERDLLG--SC----LEQS 304
Query: 419 EENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQ 478
E + ++ + + F+ R++ L + E ++ ++ I D L D S
Sbjct: 305 ELTKTSENVKSEEPGPTFEDRNLKEGEFPLRTIMENDRSEDEVTIESIDTLVDSFESST- 363
Query: 479 FDNGVDVSVISEKDTNEVELSVNENSAMITCNGAVTDSSTGI 520
+++ K T +SV+ N A C T + T I
Sbjct: 364 ----TQITIEEVKTTEGSRISVDSN-ADSECKDEQTSAETAI 400
>At3g01370.1 68416.m00059 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 1011
Score = 31.9 bits (69), Expect = 1.3
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 332 VLK-NDNMVNITQDITDVFDSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGK 390
VLK ++N+ + + + + DS T W +SN + +T N +P+ + E G
Sbjct: 704 VLKLSNNIEELNRQLVE--DSATN-ETWSDGESSNMMVEEETENQHTEPEKAREKIELGY 760
Query: 391 SDAFDAANDSEFDISSNINCIIDGLDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSL 450
S + E + + +D L + D+ E + + + S+D+ A +LS+
Sbjct: 761 SSDLSVPSSGEENWEDDSEGEVDPLTTSSQEYQEDESESASSQ-RHEGNSLDSTA-NLSV 818
Query: 451 LDET----TKTMNDDAIVHNDEL-TDRNSDSAQFDNGVDVSVISEK 491
ET + +D ++ HN L +R + +G +S + E+
Sbjct: 819 FAETGSANASSFHDRSLPHNSFLNANRKLPGSSTGSGSQISALRER 864
>At1g34355.1 68414.m04265 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1477
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 349 FDSDTEIS-RWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDI 404
F+ D + S +WD D + K+ S + + + ++E G S+ FDAA E D+
Sbjct: 249 FNEDLQTSPKWDLDVIESVAEKLSGSFVRSTQQSGGDVEGLGCSELFDAAEADECDV 305
>At1g12830.1 68414.m01490 expressed protein
Length = 213
Score = 31.5 bits (68), Expect = 1.7
Identities = 34/164 (20%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 336 DNMVNITQDITDVFDSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFD 395
DN+ N Q + +S S+ D +NG+ +++ N + + + E +
Sbjct: 26 DNVTNKAQKLNPSLNSADSESK---DGETNGSGQIENLNSSTEETIGAESSVLSEK---- 78
Query: 396 AANDSEFDISSNINCIIDGLDRDEENRLVDDKEKSDAVIDFDCRSIDT-DAGSLSLLDET 454
AA + E + ++ + D ++E +++E+ + V+D + I D G +++
Sbjct: 79 AAEEVESGVIGDVGAEEEQEDEEDEEEDDEEEEEEEEVVDRKGKGISREDKGKGKMIEVE 138
Query: 455 TKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEVEL 498
DD+ D + D FD D S S+ EV+L
Sbjct: 139 ESDDEDDS--------DDDEDDEGFDED-DESDFSDDPLAEVDL 173
>At5g19900.1 68418.m02368 PRLI-interacting factor, putative strong
similarity to PRLI-interacting factor A [Arabidopsis
thaliana] GI:11139262
Length = 494
Score = 31.1 bits (67), Expect = 2.3
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 347 DVFDSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISS 406
DV D E +++NNS +VK + + S E + GK A + +
Sbjct: 401 DVAARDNEAVVKENNNNSKSVDEVKANKQSVGVGSSGESKPEGKEKAETEFREVSGEQCE 460
Query: 407 NINCIIDGLDRDEENRLVDDK 427
N + G+D+ +EN + +K
Sbjct: 461 EDNQGVVGMDQSKENEMAIEK 481
>At3g50550.1 68416.m05528 expressed protein isoform contains a
non-consensus AT donor site at intron 1
Length = 95
Score = 31.1 bits (67), Expect = 2.3
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 343 QDITDVFDSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEF 402
++I D++ SD E D D++ + LS + + D D+ +DS+
Sbjct: 5 KEIVDIYSSDEEYDEDDDDDDDTDGESSDEDDEEEDRNLSGDDSESSEDDYTDSNSDSDD 64
Query: 403 DISSNINCIIDGLDRDEENRLVD 425
D + + D + +EE+ LVD
Sbjct: 65 DDEEDDD---DEEEEEEEDSLVD 84
>At5g40110.1 68418.m04865 hypothetical protein
Length = 280
Score = 30.7 bits (66), Expect = 3.0
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 376 TAKPKLSNEIEAHGKSDAFDAANDSEFDISSNINCIIDGLDRDEENRLVDDKEKSDAVID 435
T K +N HG D DS ++ N N +D D DE+++ +D+E+ D
Sbjct: 85 TVKTPDNNVSRTHGDDAESDRVCDSVSNVDEN-NEAVDEKDDDEDDKTNEDEEEGDNKDG 143
Query: 436 FDCRSIDTDAGSL--SLLDET 454
D GS+ S LD T
Sbjct: 144 GGYDDYQGDDGSIGGSTLDPT 164
>At4g25280.1 68417.m03636 adenylate kinase family protein contains
Pfam profile: PF00406 adenylate kinase
Length = 249
Score = 30.7 bits (66), Expect = 3.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 401 EFDISSNINCIIDGLDRDEENRLVDD---KEKSDAVIDFDC 438
E + S N +IDG R EENR+ + + D V+ FDC
Sbjct: 114 ELESSDNRKFLIDGFPRTEENRVAFERIIRADPDVVLFFDC 154
>At4g18020.3 68417.m02683 pseudo-response regulator 2 (APRR2) (TOC2)
identical to pseudo-response regulator 2 GI:7576356 from
[Arabidopsis thaliana]
Length = 487
Score = 30.7 bits (66), Expect = 3.0
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 415 LDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNS 474
LD D + + E ++ + D D G +D T + ++DD +V +E
Sbjct: 192 LDGDCQENINFSMENVNSSTEKDNMEDHQDIGESKSVDTTNRKLDDDKVVVKEE----RG 247
Query: 475 DSAQFDNGVDVSVISEKDTNEVELSVNEN 503
DS + + G +ISEK T+ V++ E+
Sbjct: 248 DSEKEEEGETGDLISEK-TDSVDIHKKED 275
>At4g18020.2 68417.m02682 pseudo-response regulator 2 (APRR2) (TOC2)
identical to pseudo-response regulator 2 GI:7576356 from
[Arabidopsis thaliana]
Length = 535
Score = 30.7 bits (66), Expect = 3.0
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 415 LDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNS 474
LD D + + E ++ + D D G +D T + ++DD +V +E
Sbjct: 192 LDGDCQENINFSMENVNSSTEKDNMEDHQDIGESKSVDTTNRKLDDDKVVVKEE----RG 247
Query: 475 DSAQFDNGVDVSVISEKDTNEVELSVNEN 503
DS + + G +ISEK T+ V++ E+
Sbjct: 248 DSEKEEEGETGDLISEK-TDSVDIHKKED 275
>At4g18020.1 68417.m02681 pseudo-response regulator 2 (APRR2) (TOC2)
identical to pseudo-response regulator 2 GI:7576356 from
[Arabidopsis thaliana]
Length = 535
Score = 30.7 bits (66), Expect = 3.0
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 415 LDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNS 474
LD D + + E ++ + D D G +D T + ++DD +V +E
Sbjct: 192 LDGDCQENINFSMENVNSSTEKDNMEDHQDIGESKSVDTTNRKLDDDKVVVKEE----RG 247
Query: 475 DSAQFDNGVDVSVISEKDTNEVELSVNEN 503
DS + + G +ISEK T+ V++ E+
Sbjct: 248 DSEKEEEGETGDLISEK-TDSVDIHKKED 275
>At5g18570.1 68418.m02195 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 681
Score = 30.3 bits (65), Expect = 4.0
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 418 DEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDS- 476
+EE + + K D I + R +D GS +DE + D+ + DE DS
Sbjct: 117 EEEEKEKEVKSYDDDDIWGNYRRLDVFEGSSRSIDEDDEDWEDEVFEYGDETDAEKDDSE 176
Query: 477 -AQFDNGVDVSVISEKDTNEVELSVNENSAMITC 509
++ +G + E++ +E+ + A++ C
Sbjct: 177 GSELKDGEVLCFSGEEEEDEIGVKEKGVPAVMRC 210
>At4g10930.1 68417.m01778 expressed protein
Length = 984
Score = 30.3 bits (65), Expect = 4.0
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 403 DISSNINCIIDGLDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDA 462
DISS ++ D D+ D + ++D V++ DC SID D +LS T +++
Sbjct: 108 DISSRLSS-----DSDQPFFAADIENRADPVVEKDCLSID-DKKNLS-----TAAISNSD 156
Query: 463 IVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEVELSVNENSAMITCNGAVTDSSTGID 521
+ L ++SD + D + + NE++L E + ++T +D
Sbjct: 157 VASVISLKRKHSDCSGDDGNSETKPEIYESLNELKLEEEEELTTVHHESRSPSNNTTVD 215
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 30.3 bits (65), Expect = 4.0
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Query: 350 DSDTEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEIEAHGKSDAFDAANDSEFDISSNIN 409
+SD +I ++D+ NG + + + +L++ I + + +++D + N+
Sbjct: 703 NSDADIYA-ENDSGRNGALALPLAAIEFVTRLASGIFSRARKSVDSSSSDYTVE---NVY 758
Query: 410 CIIDGLDRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDEL 469
+ + +E +DD S + +C S T A + ++L T T +D D+
Sbjct: 759 KQAESTNPSDETDSLDDPSPSKVNVTDNCESKGTQANAKNILSGETSTFLED----EDKP 814
Query: 470 TDRNSDSAQF 479
DS F
Sbjct: 815 VPSEGDSCSF 824
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 29.9 bits (64), Expect = 5.3
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 290 DILLKNMVNGHYVVSGDLDDFGLDKSCFYPYSARSI----RVKTEPVLKNDNMVNITQDI 345
DIL+ M+NG ++ G L +++C P +A + + + ++ N +++ Q+
Sbjct: 130 DILMATMLNGAAIMDGALLIIAANETCPQPQTAEHLASVDMMHLKDIIIIQNKIDLIQE- 188
Query: 346 TDVFDSDTEISRWDSDNNSNGTSKVKTS 373
+ +I R+ ++ N+ G V S
Sbjct: 189 NEAIKQHEDIQRFITNTNAEGAPIVPVS 216
>At1g64385.1 68414.m07297 expressed protein
Length = 351
Score = 29.9 bits (64), Expect = 5.3
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 442 DTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEVELSVN 501
D+ + S+ +D + + NDD D SDS++ D G + S++ E E +V+
Sbjct: 48 DSSSKSIITIDHSKNSTNDDDTQLGDGSKMIGSDSSKSDQG---KIASDESDKEEEEAVS 104
Query: 502 ENSA 505
+NS+
Sbjct: 105 KNSS 108
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 29.5 bits (63), Expect = 7.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 442 DTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDVS 486
+ D G+LSLL T+ D+ + S+SA+ D+GV V+
Sbjct: 219 EKDGGALSLLGSVYGTVEDEDANEESANDSKTSESAKGDDGVKVT 263
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 29.5 bits (63), Expect = 7.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 442 DTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNGVDVS 486
+ D G+LSLL T+ D+ + S+SA+ D+GV V+
Sbjct: 219 EKDGGALSLLGSVYGTVEDEDANEESANDSKTSESAKGDDGVKVT 263
>At4g08750.1 68417.m01443 RNA recognition motif (RRM)-containing
protein contains Pfam domain PF00076: RNA recognition
motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 461
Score = 29.5 bits (63), Expect = 7.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 457 TMNDDAIVHNDELTDRNSDSAQFDNGVDVSVISEKDTNEV 496
T ++I DE D + D + D +S ++KD+NEV
Sbjct: 296 TAKAESIASKDESKDNSHDEKKLDLPTSISYSADKDSNEV 335
>At2g16485.1 68415.m01889 expressed protein ; expression supported
by MPSS
Length = 617
Score = 29.5 bits (63), Expect = 7.0
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 327 VKTEPVLKNDNMVNITQDITDVFDSD-TEISRWDSDNNSNGTSKVKTSNLTAKPKLSNEI 385
+K E K+DNM ++ +D+ + DS +I D+ G ++ + + K +
Sbjct: 445 IKDEDQEKDDNMTDLAEDVENHRDSSVADIEEGREDHEDMGVTETQKETVLGKVDRTKIA 504
Query: 386 EAHGKSDAFDAANDSEFD 403
E ++D D E D
Sbjct: 505 EVSEETDTRIEDEDQEKD 522
>At3g53310.1 68416.m05881 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 286
Score = 29.1 bits (62), Expect = 9.2
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 416 DRDEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSD 475
D D ++ + D+K+ +D V D D D D DE + ++ DE T +D
Sbjct: 118 DSDSDSVVEDEKDSTDVVEDDDDEDEDEDEDDDGSFDEDEEI--SQSLYPIDEET--ATD 173
Query: 476 SAQFDNGVDVSVIS 489
+A F+ +DV ++
Sbjct: 174 AAVFEGNLDVEALT 187
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/61 (22%), Positives = 33/61 (54%)
Query: 418 DEENRLVDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSA 477
+EE R+ D++E+ + ++ RS +D ++ DE+ + + A V +D + + + A
Sbjct: 15 EEEERVKDNEEEDEEELEAVARSSGSDDDEVAAADESPVSDGEAAPVEDDYEDEEDEEKA 74
Query: 478 Q 478
+
Sbjct: 75 E 75
>At1g77250.1 68414.m08997 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 522
Score = 29.1 bits (62), Expect = 9.2
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 408 INCIIDGLDRDEENRLVDDKEKSDAVIDFDCRSID--TDAGSLSLLDETTKTMNDDAIVH 465
++C G+ EN +V +K K+ ++ D RS+D T+ S E + N + VH
Sbjct: 285 LDCTSKGIGSPHENCVVCEKMKTQGMMKTDNRSVDTSTECKEDSNESEENSSCNMNHEVH 344
Query: 466 NDELTDRNSD 475
+ E++ R+S+
Sbjct: 345 HVEMS-RDSE 353
>At1g65140.1 68414.m07385 ubiquitin carboxyl-terminal hydrolase
family protein contains Pfam profile PF00443: Ubiquitin
carboxyl-terminal hydrolase
Length = 331
Score = 29.1 bits (62), Expect = 9.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 424 VDDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHNDELTDRNSDSAQFDNGV 483
V + EK D ID D DT+ +LD T+ + D + + T +N + ++ V
Sbjct: 8 VKEMEK-DEEIDSDLSDSDTEEPEEKILDATSLSALDMILKVSQNSTIQNESVSLWNISV 66
Query: 484 DVSVISEKDTNEVELSVNENSAM 506
VS +S E S+ +N ++
Sbjct: 67 FVSNLSMDYVQEANQSLTDNESV 89
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 29.1 bits (62), Expect = 9.2
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Query: 153 LVPRVKRIREVKLDIFPKSKKVRLACDACRVWFVDSIEAARHKQLHTSGSLPYKCHRCTA 212
L+ R K+ EV+ ++ + L D C D + +H + S + C RC+
Sbjct: 67 LLKRDKKDEEVRKRVYVCPEPTCLHHDPCHA-LGDLVGIKKHFRRKHSVHKQWVCERCSK 125
Query: 213 EYKLVTTYDEHFKNDCIPFDEVPDVKCEDCWRYFATDNLLIQH 255
Y + + Y H K C C DC R F+ I+H
Sbjct: 126 GYAVQSDYKAHLKT-CGSRGH----SC-DCGRVFSRVESFIEH 162
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 29.1 bits (62), Expect = 9.2
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 367 TSKVKTSNLTAKPKLSNEIEAHGKS--DAFDAANDSEFDISSNINCIIDGLDRDEENRLV 424
TS++K K K I+ S A + E D+S N+N +++ L EE
Sbjct: 248 TSQLKLEKAEEKLKDLEAIQVKNSSLEATLSVAMEKERDLSENLNAVMEKLKSSEERLEK 307
Query: 425 DDKEKSDAVIDFDCRSIDTDAGSLSLLDETTKTMNDDAIVHND--ELTDRNSD 475
+E +A RSI+ +A + KTM D + + LT+++ D
Sbjct: 308 QAREIDEAT----TRSIELEALHKHSELKVQKTMEDFSSRDTEAKSLTEKSKD 356
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.132 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,294,711
Number of Sequences: 28952
Number of extensions: 613032
Number of successful extensions: 1573
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1548
Number of HSP's gapped (non-prelim): 58
length of query: 622
length of database: 12,070,560
effective HSP length: 85
effective length of query: 537
effective length of database: 9,609,640
effective search space: 5160376680
effective search space used: 5160376680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 62 (29.1 bits)
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