Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001815-TA|BGIBMGA001815-PA|undefined
(208 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g43210.1 68416.m04561 kinesin motor family protein (NACK2) co... 33 0.18
At1g10560.1 68414.m01189 armadillo/beta-catenin repeat family pr... 32 0.32
At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 31 0.74
At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 31 0.74
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.74
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 30 1.3
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 29 2.3
At3g22450.1 68416.m02837 expressed protein ; expression supporte... 29 2.3
At2g31620.1 68415.m03863 receptor-like protein kinase-related co... 29 2.3
At5g22370.1 68418.m02610 ATP-binding family protein contains Pfa... 28 5.3
At4g13920.1 68417.m02154 disease resistance family protein / LRR... 28 5.3
At1g47900.1 68414.m05334 expressed protein 28 5.3
At5g10120.1 68418.m01172 ethylene insensitive 3 family protein c... 27 6.9
At2g46180.1 68415.m05742 intracellular protein transport protein... 27 6.9
At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related ... 27 6.9
At1g15415.1 68414.m01848 expressed protein very low similarity t... 27 6.9
At5g67400.1 68418.m08499 peroxidase 73 (PER73) (P73) (PRXR11) id... 27 9.2
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 27 9.2
At4g16310.1 68417.m02473 amine oxidase family protein / SWIRM do... 27 9.2
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 27 9.2
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 27 9.2
>At3g43210.1 68416.m04561 kinesin motor family protein (NACK2)
contains Pfam profile: PF00225 kinesin motor domain
Length = 938
Score = 32.7 bits (71), Expect = 0.18
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 26 QQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNL 85
Q+R F V ++ N V+D+ NR T R +D+ IV ++ ++S +L
Sbjct: 142 QERSFVLKVSALEIYNETVVDLLNRDTGPLRLLDDPEKGTIV----ENLVEEVVESRQHL 197
Query: 86 TAVKTDANVTKSSGRKSMN--APGAPNILKEKLLSYLDDAFGDIKNKMAVLNVVKMS 140
+ + + G ++N + + I++ + S L + G +++ MA LN+V ++
Sbjct: 198 QHLISICEDQRQVGETALNDKSSRSHQIIRLTIHSSLREIAGCVQSFMATLNLVDLA 254
>At1g10560.1 68414.m01189 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 697
Score = 31.9 bits (69), Expect = 0.32
Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 42 ANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANVTKSSGRK 101
A +L+++ +T ++ E L ++ + + + L SAS L + + + ++ G
Sbjct: 452 AGILNLSKHVTGKSKIAGEGLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGEN 511
Query: 102 SMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVLNVVKMSYKNNGYFKI---GYITASLDT 158
PG NI+K D +GD + A+L V+ + +++ ++++ G + LD
Sbjct: 512 PDAIPGLMNIVK-------GDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDL 564
Query: 159 LK 160
L+
Sbjct: 565 LR 566
>At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 30.7 bits (66), Expect = 0.74
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 7/146 (4%)
Query: 2 QGQRKKNKLSFKGPDSADRETVEKQQRDFQY--VVMTIKKLNANVLDINNRITSLNRFID 59
Q ++KKNK K D+ + ++R+ + V I + +A D ++ ++ +D
Sbjct: 452 QAKQKKNKNKGKEMRKEDKVRTQTEEREIEKEECVRAIAESSAEKPDTLGDVSDVSDSVD 511
Query: 60 EKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANVTKSSGRKSMNAPGAPN-ILKEKLLS 118
S I++ + R + + + V + S GR N+ PN + + K LS
Sbjct: 512 S--SAEILQLDSEDRESSPVHWEMDASEVHPPSAGDTSRGRG--NSFSIPNGVAERKGLS 567
Query: 119 YLDDAFGDIKNKMAVLNVVKMSYKNN 144
+DD+ N V SYK N
Sbjct: 568 TMDDSSSTCSNDSIQSGVANGSYKGN 593
>At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 30.7 bits (66), Expect = 0.74
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 7/146 (4%)
Query: 2 QGQRKKNKLSFKGPDSADRETVEKQQRDFQY--VVMTIKKLNANVLDINNRITSLNRFID 59
Q ++KKNK K D+ + ++R+ + V I + +A D ++ ++ +D
Sbjct: 452 QAKQKKNKNKGKEMRKEDKVRTQTEEREIEKEECVRAIAESSAEKPDTLGDVSDVSDSVD 511
Query: 60 EKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANVTKSSGRKSMNAPGAPN-ILKEKLLS 118
S I++ + R + + + V + S GR N+ PN + + K LS
Sbjct: 512 S--SAEILQLDSEDRESSPVHWEMDASEVHPPSAGDTSRGRG--NSFSIPNGVAERKGLS 567
Query: 119 YLDDAFGDIKNKMAVLNVVKMSYKNN 144
+DD+ N V SYK N
Sbjct: 568 TMDDSSSTCSNDSIQSGVANGSYKGN 593
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 17 SADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLK 76
SAD++ + +Q K L+ +LDI+N I + I E +S + +HG +
Sbjct: 408 SADQQVADMKQ-SLDNAEEEKKMLSQRILDISNEIQEAQKTIQEHMSESEQLKESHGVKE 466
Query: 77 RDL 79
R+L
Sbjct: 467 REL 469
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 37 IKKLNANVLDINNRITSLNRFIDE-KLSNVIVRRSAHGRLKRDLDSASNLTAVKT 90
+KKL D+N+ ++SL + IDE + R RLK+ LD+ + L +KT
Sbjct: 1152 VKKLADENKDLNDLVSSLEKKIDETEKKYEEASRLCEERLKQALDAETGLIDLKT 1206
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 29.1 bits (62), Expect = 2.3
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 4 QRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLS 63
Q+ KL+ KG + A RE E+ + + + + +T K + +I + IDE
Sbjct: 873 QKLIKKLT-KGIEEATREK-ERLEGEKENLHVTFKDITQKAFEIQETYKKTQQLIDEHKD 930
Query: 64 NVIVRRSAHGRLKRDLDSASNLTAVKTDANVTKSSGRKSMN 104
+ +S + LK+ +D L A + DA +K N
Sbjct: 931 VLTGAKSDYENLKKSVD---ELKASRVDAEFKVQDMKKKYN 968
>At3g22450.1 68416.m02837 expressed protein ; expression supported
by MPSS
Length = 311
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 1 MQGQRKKNKLSFKGPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDE 60
++ + KK SF G E V+K++R F + +T LDI S+ +
Sbjct: 156 VRDEYKKRNDSFTGETDHPNEAVKKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIH 215
Query: 61 KLSN--VIVRRSAHGRLKRDLDSASNLTA 87
++++ V V S +K DL S N+ A
Sbjct: 216 RVTSKVVTVAHSISKDMKFDLGSRRNVAA 244
>At2g31620.1 68415.m03863 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function that is usually associated with protein kinase
domain Pfam:PF00069; similar to receptor-like protein
kinase 4 (GI:13506745) and receptor-like protein kinase
5 (GI:13506747) [Arabidopsis thaliana]
Length = 255
Score = 29.1 bits (62), Expect = 2.3
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 7/152 (4%)
Query: 43 NVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASNLTAVKTDANV-TKSSGRK 101
NVL +N + L + S RLK LDS SN+ V S
Sbjct: 23 NVLSLNQTNSYLQHICINSEGKYKAKNSYESRLKDHLDSMSNILDYGFIHGVGGADSSTY 82
Query: 102 SMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVLNVVKMSYKNNGYFKIG--YITASLDTL 159
+ A + + K S L AF I + N ++ + +N + I Y +D
Sbjct: 83 YIKAQCRGDASESKCRSCLFTAFSGILRR-CPNNRGRIIWYDNCFLYISEIYTYEKIDFK 141
Query: 160 K-VYLDNMKQDMNANKEFWDDKRVLNLFDKLK 190
+YL N K D++ NK+ + +K L DKLK
Sbjct: 142 HYLYLHNAK-DVSGNKKLF-NKNTKALLDKLK 171
>At5g22370.1 68418.m02610 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 291
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 126 DIKNKMAVLNVVKMSYKNNGYFKIGYITASLDTLKVYLDNMKQDMN 171
DI++K +V ++VK+ K+NGY G + ++ K+ + D N
Sbjct: 236 DIQDKESVGDLVKLIDKSNGYIFAGIDASVVEYSKIAIGQTDWDYN 281
>At4g13920.1 68417.m02154 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 891
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 46 DINNRITSLNRFIDEKLSNVIVRRSAHGRLKRDLDSASN 84
+I+N+ S+ + LS VI S HG L R LD SN
Sbjct: 541 EISNKTLSILHLRNNSLSGVIPEESLHGYL-RSLDVGSN 578
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 27.9 bits (59), Expect = 5.3
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 18 ADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLKR 77
AD E +E + + + IK L V ++ + N +EK N+ +R SA K+
Sbjct: 263 ADAE-IETLKSNLEMCEREIKSLKYEVHVVSKELEIRN---EEK--NMCIR-SAESANKQ 315
Query: 78 DLDSASNLTAVKTDANVTKSSGRKSMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVLNVV 137
L+ + ++ + +S RK + P A +K ++ + D+ GD + K + + V
Sbjct: 316 HLEGVKKIAKLEAECQRLRSLVRKKLPGPAALAQMKLEVENLGRDS-GDARQKRSPVKVS 374
Query: 138 KMSYKNNGYFKIG 150
GY G
Sbjct: 375 SPCKSPGGYSSTG 387
>At5g10120.1 68418.m01172 ethylene insensitive 3 family protein
contains Pfam profile: PF04873 ethylene insensitive 3
Length = 471
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 162 YLDNMKQDMNANKEFWDDKRVLNLFDKLKAADNAVNGLLETL 203
+L+ M+Q+ + ++ F DD+ FD+L +D + N L L
Sbjct: 400 WLEKMQQEFHCSRRFEDDEGTGTDFDQLTESDRSDNVNLNQL 441
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 14 GPDSADRETVEKQQRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHG 73
G + A R+T+ Q+ + I+K + D+N ++ + R ID K ++ ++A G
Sbjct: 415 GLEKALRQTMANQEEIKSSSDLEIRKSKGIIEDLNQKLANCLRTIDSKNVELLNLQTALG 474
Query: 74 RLKRDLDSASN----LTAVKTDA 92
+ ++++ + L K DA
Sbjct: 475 QYYAEIEAKEHFERELAVAKEDA 497
>At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related
contains weak similarity to Swiss-Prot:P10366 ATP
phosphoribosyltransferase [Escherichia coli]
Length = 1402
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query: 68 RRSAHGRLK---RDLDSASNLT-------AVKTDANVTKSSGRKSMNAPGAPNILKEKLL 117
RRS H RL R LD N + AV T A + K APG PN+L++ L
Sbjct: 848 RRSGHYRLHQTVRPLDEKDNDSIQVRKSLAVSTAAELLKLVFLSMPTAPGMPNLLEDTLR 907
Query: 118 SY 119
Y
Sbjct: 908 RY 909
>At1g15415.1 68414.m01848 expressed protein very low similarity to
LEA protein [Cicer arietinum] GI:2909420, seed
maturation protein PM30 [Glycine max] GI:4838147
Length = 96
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 92 ANVTKSSGRKSMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVLNVVKMSYKN 143
A+V ++ S A G EK+ S DA +KNK+ + N YKN
Sbjct: 20 AHVKENDCNNSSQASGFLQQKGEKVKSMAHDASEAVKNKLGINNDNNEEYKN 71
>At5g67400.1 68418.m08499 peroxidase 73 (PER73) (P73) (PRXR11)
identical to SP|Q43873 Peroxidase 73 precursor (EC
1.11.1.7) (Atperox P73) (PRXR11) (ATP10a) {Arabidopsis
thaliana}
Length = 329
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 30 FQYVVMTIKKLNANVLDINNRITSLNR-FIDEKLS--NVIVRRSAH 72
F +V T +N N+ NN++T LN+ F KL+ ++I +AH
Sbjct: 152 FDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAH 197
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 16 DSADRETVEKQQRDFQYVVMTIKKLNANVLDINNR 50
DS DRE + K +++FQ ++ LN+ +L N+
Sbjct: 93 DSLDRERIGKAKQEFQEIIKDPFMLNSIILVFANK 127
>At4g16310.1 68417.m02473 amine oxidase family protein / SWIRM
domain-containing protein low similarity to polyamine
oxidase isoform-1 [Homo sapiens] GI:14860862; contains
Pfam profiles PF01593: amine oxidase flavin-containing,
PF04433: SWIRM domain
Length = 1265
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 38 KKLNANVLDINNRITSLNRFIDEKLSNV 65
KK A+++D N R S+N D SNV
Sbjct: 551 KKCEASIIDDNKRSVSMNALQDSTASNV 578
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 27.1 bits (57), Expect = 9.2
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Query: 27 QRDFQYVVMTIKKLNANVLDINNRITSLNRFIDEKLSNVIVRRSAHGRLK-RDLDSASNL 85
QR+ YV + L A + +++ + S NR+ D N + A +++ R + + +
Sbjct: 1130 QREMDYVTSERQGLLARIEELSKELASSNRWQDAAAEN---KEKAKLKMRLRGMQARLDA 1186
Query: 86 TAVKTDANVTKSS--GRKSMNAPGAPNILKEKLLSYLDDAFGDIKNKMAVLNVVKMSYKN 143
+++ +V +S RK A LKEKL S + D+K +++ + +N
Sbjct: 1187 ISLRYKQSVQESELMNRKFKEASAK---LKEKLASKALEVL-DLKKQLSASSRTIDEPRN 1242
Query: 144 N--GYFKIGYITASLDTLKVYLDNMKQDMNANKEFWDDKRVLNLFDKLKAADN 194
+ Y + A++ + V + ++N +K +N+ K ADN
Sbjct: 1243 SLESYCDAAVVVATVVVVVVEQEIPNLRYSSNSIEVVEKAAINMGSKEDKADN 1295
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 74 RLKRDLDSASNLTAVKTDANVTKSSGRKSMNAP 106
R+KR D +NL +++ D TK G+ + P
Sbjct: 1964 RVKRQEDGETNLISMEVDEPTTKVKGKSKVGEP 1996
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.131 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,441,738
Number of Sequences: 28952
Number of extensions: 174109
Number of successful extensions: 586
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 576
Number of HSP's gapped (non-prelim): 24
length of query: 208
length of database: 12,070,560
effective HSP length: 78
effective length of query: 130
effective length of database: 9,812,304
effective search space: 1275599520
effective search space used: 1275599520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -