Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001814-TA|BGIBMGA001814-PA|IPR001810|Cyclin-like F-box
(684 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18915.2 68415.m02208 F-box family protein / LOV kelch protei... 37 0.039
At2g18915.1 68415.m02207 F-box family protein / LOV kelch protei... 37 0.039
At5g57360.1 68418.m07166 F-box family protein / LOV kelch protei... 36 0.12
At3g54650.1 68416.m06046 F-box family protein (FBL17) contains s... 34 0.27
At2g39940.1 68415.m04908 coronatine-insensitive 1 / COI1 (FBL2) ... 34 0.27
At1g51550.1 68414.m05802 F-box family protein similar to F-box Z... 34 0.27
At5g25350.1 68418.m03007 F-box family protein contains Pfam PF00... 33 0.47
At2g39855.1 68415.m04895 expressed protein 33 0.47
At5g39450.1 68418.m04778 F-box family protein contains Pfam:PF00... 33 0.63
At3g07550.2 68416.m00902 F-box family protein (FBL12) contains s... 33 0.83
At3g07550.1 68416.m00901 F-box family protein (FBL12) contains s... 33 0.83
At2g41170.1 68415.m05085 F-box family protein contains Pfam PF00... 33 0.83
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 32 1.4
At2g25490.1 68415.m03052 F-box family protein (FBL6) contains si... 32 1.4
At1g68050.1 68414.m07774 F-box family protein (FKF1) / adagio 3 ... 32 1.4
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 31 2.5
At3g03750.2 68416.m00381 SET domain-containing protein low simil... 31 2.5
At3g03750.1 68416.m00380 SET domain-containing protein low simil... 31 2.5
At1g15740.1 68414.m01888 leucine-rich repeat family protein 31 2.5
At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR ... 31 3.3
At5g16030.1 68418.m01874 expressed protein 31 3.3
At2g39855.2 68415.m04896 expressed protein 31 3.3
At4g25340.1 68417.m03647 immunophilin-related / FKBP-type peptid... 30 4.4
At2g21830.1 68415.m02594 DC1 domain-containing protein contains ... 30 4.4
At5g45560.1 68418.m05595 pleckstrin homology (PH) domain-contain... 30 5.8
At4g05470.1 68417.m00829 F-box family protein (FBL21) contains s... 30 5.8
At1g29470.1 68414.m03605 dehydration-responsive protein-related ... 30 5.8
At5g66900.1 68418.m08433 disease resistance protein (CC-NBS-LRR ... 29 7.7
At4g39980.1 68417.m05662 2-dehydro-3-deoxyphosphoheptonate aldol... 29 7.7
At4g04350.1 68417.m00622 leucyl-tRNA synthetase, putative / leuc... 29 7.7
At3g07340.1 68416.m00875 basic helix-loop-helix (bHLH) family pr... 29 7.7
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 29 7.7
At1g77260.1 68414.m08998 dehydration-responsive protein-related ... 29 7.7
At1g76180.1 68414.m08846 dehydrin (ERD14) identical to SP|P42763... 29 7.7
At1g03530.1 68414.m00334 expressed protein similar to hypothetic... 29 7.7
>At2g18915.2 68415.m02208 F-box family protein / LOV kelch protein 2
(LKP2) / adagio 2 (ADO2) E3 ubiquitin ligase SCF complex
F-box subunit; identical to Adagio 2 GI:13487070 from
[Arabidopsis thaliana]; contains Pfam profiles PF01344:
Kelch motif and PF00646: F-box domain; identical to cDNA
LOV kelch protein 2 GI:18146957; identical to cDNA
Adagio 2 (ADO2) GI:13487069
Length = 611
Score = 37.1 bits (82), Expect = 0.039
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 5 PSSENGGYAGSAELLDLSDDVL-LCILKYCTPRDLKALGYTCPRLGALVVDRTLW----- 58
P E G + +LSD+V+ + IL TP D+ ++G C RL L + +W
Sbjct: 185 PIGERNVSRGLCGIFELSDEVIAIKILSQLTPGDIASVGCVCRRLNELTKNDDVWRMVCQ 244
Query: 59 -----ESVDARESPSGPKRLRWL 76
E+ ES G KR+ W+
Sbjct: 245 NTWGTEATRVLESVPGAKRIGWV 267
>At2g18915.1 68415.m02207 F-box family protein / LOV kelch protein 2
(LKP2) / adagio 2 (ADO2) E3 ubiquitin ligase SCF complex
F-box subunit; identical to Adagio 2 GI:13487070 from
[Arabidopsis thaliana]; contains Pfam profiles PF01344:
Kelch motif and PF00646: F-box domain; identical to cDNA
LOV kelch protein 2 GI:18146957; identical to cDNA
Adagio 2 (ADO2) GI:13487069
Length = 601
Score = 37.1 bits (82), Expect = 0.039
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 5 PSSENGGYAGSAELLDLSDDVL-LCILKYCTPRDLKALGYTCPRLGALVVDRTLW----- 58
P E G + +LSD+V+ + IL TP D+ ++G C RL L + +W
Sbjct: 175 PIGERNVSRGLCGIFELSDEVIAIKILSQLTPGDIASVGCVCRRLNELTKNDDVWRMVCQ 234
Query: 59 -----ESVDARESPSGPKRLRWL 76
E+ ES G KR+ W+
Sbjct: 235 NTWGTEATRVLESVPGAKRIGWV 257
>At5g57360.1 68418.m07166 F-box family protein / LOV kelch protein 1
(LKP1) E3 ubiquitin ligase SCF complex F-box subunit;
identical to clock-associated PAS protein ZTL; ZEITLUPE
GI:7839456, LOV kelch protein 1 GI:11610573, Adagio 1
GI:13487068 from [Arabidopsis thaliana]; contains Pfam
profile PF01344: Kelch motif; identical to cDNA Adagio 1
(ADO1) GI:13487067; identical to cDNA LKP1 mRNA for LOV
kelch protein 1, GI:11610572
Length = 609
Score = 35.5 bits (78), Expect = 0.12
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 14 GSAELLDLSDDVL-LCILKYCTPRDLKALGYTCPRLGALVVDRTLW----------ESVD 62
G L LSD+V+ + IL TPRD+ ++ C RL L + LW E+
Sbjct: 193 GMCGLFQLSDEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTR 252
Query: 63 ARESPSGPKRLRW 75
E+ G KRL W
Sbjct: 253 VLETVPGAKRLGW 265
>At3g54650.1 68416.m06046 F-box family protein (FBL17) contains
similarity to F-box protein FBL2 GI:6010699 from [Rattus
norvegicus]
Length = 593
Score = 34.3 bits (75), Expect = 0.27
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 555 DVSSAYQMTRFDPTTLVSDTTVHRFGRADS--DNINYINIGPNGQHDQPATRPDRSNLRI 612
++S + D T LV T V GR + NI+ ++ + T + LR+
Sbjct: 299 EISLEFSRQEDDSTDLV--TMVDGLGRTCTRLQNIHIASLKLSHTVVLSLTAVNFRYLRM 356
Query: 613 LSLTGFRNITNRSLVHLATAAPRLRFIDFSGTRVTQRGVDTFRSLRPD 660
LSL NIT+ S+ +++ L +D SG+ +T G+ + PD
Sbjct: 357 LSLVLGINITDASVAAISSGYKNLELLDLSGSSITDTGLGMICDVLPD 404
>At2g39940.1 68415.m04908 coronatine-insensitive 1 / COI1 (FBL2) E3
ubiquitin ligase SCF complex F-box subunit; identical to
LRR-containing F-box protein GI:3158394 from
[Arabidopsis thaliana]
Length = 592
Score = 34.3 bits (75), Expect = 0.27
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 584 SDNINYINIGPNGQHDQPATRPDRS--NLRILSLTGFRNITNRSLVHLATAAPRLRFIDF 641
S N+ ++ +G G+ D+ R NL+ L + G + R++ T P LR++
Sbjct: 462 SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCC-FSERAIAAAVTKLPSLRYLWV 520
Query: 642 SGTRVTQRGVDTFRSLRP--DCEIIYSQYIDRNASEGDM 678
G R + G D + RP + E+I S+ + +G++
Sbjct: 521 QGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEI 559
>At1g51550.1 68414.m05802 F-box family protein similar to F-box
ZEITLUPE/FKF/LKP/ADAGIO proteins e.g. GI:13487068 from
[Arabidopsis thaliana]
Length = 478
Score = 34.3 bits (75), Expect = 0.27
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 4 PPSSENGGYAGSAELLDLSDDVLLCILKYCTPRDLKALGYTCPRLGALVVDRTLWESVDA 63
PPS+ S+ +++L DD LL IL + + TC R +L +LWE++
Sbjct: 11 PPSTSQS----SSPIINLPDDHLLTILLLLPVDSILSFSMTCKRYKSLACSDSLWEALCE 66
Query: 64 RE 65
RE
Sbjct: 67 RE 68
>At5g25350.1 68418.m03007 F-box family protein contains Pfam
PF00646: F-box domain and Pfam PF00560: Leucine Rich
Repeat (6 copies); similar to F-box protein FBL6
(GI:4432860) [Homo sapiens]
Length = 623
Score = 33.5 bits (73), Expect = 0.47
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 610 LRILSLTGFRNITNRSLVHLATAAPRLRFIDFSGTRVTQRGVDTFRS 656
L L+L G +NITN SLV +A + +D S T V+ G+ S
Sbjct: 514 LESLNLDGCKNITNASLVAVAKNCYSVNDLDISNTLVSDHGIKALAS 560
Score = 29.5 bits (63), Expect = 7.7
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 602 ATRPDRSNLRILSLTGFRNITNRSLVHLATAAPRLRFIDFSGT-RVTQRGVDTFRSLRPD 660
A+ P+ NL++LS+ G +IT++S + L ++ R++ VDT
Sbjct: 559 ASSPNHLNLQVLSIGGCSSITDKSKACIQKLGRTLLGLNIQRCGRISSSTVDTLLENLWR 618
Query: 661 CEIIY 665
C+I+Y
Sbjct: 619 CDILY 623
>At2g39855.1 68415.m04895 expressed protein
Length = 151
Score = 33.5 bits (73), Expect = 0.47
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 476 PRPEAVNQGASTSKDDP---QPSTSNKTDQKNGEKTENKEPKQNILYVNVGRRLHAMYRL 532
P P AV QG TS++ QP T+ +T + GE+++NKE K Y + L
Sbjct: 43 PPPSAVTQGNLTSRNGAAKYQP-TNFETPNERGERSKNKERKS---YQS--EETQPPCNL 96
Query: 533 AIPVYKVGESGDSQPAAPSRRLDVSSAYQMTRFDPTTLVSDTTVHRFGRADSDNINYI 590
+ +Y G+ D+ ++ + VS + FD T + +T RF R ++ ++YI
Sbjct: 97 SSSIYYGGQ--DNYSSSTTNPDAVSPYIFVLHFDRNTKMHNTLKWRF-REENGYVSYI 151
>At5g39450.1 68418.m04778 F-box family protein contains
Pfam:PF00646 F-box domain ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 579
Score = 33.1 bits (72), Expect = 0.63
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 14 GSAELLDLSDDVLLCILKYCTPRDLKALGYTCPRLGALVVDRTLW 58
G+ LL L +DV+ I ++ +PRD+ L C L +V +W
Sbjct: 15 GTCLLLSLPEDVIAVIARFVSPRDICNLSLCCKSLCDVVDSERIW 59
>At3g07550.2 68416.m00902 F-box family protein (FBL12) contains
similarity to F-box protein FBL6 GI:6456737 from [Homo
sapiens]
Length = 395
Score = 32.7 bits (71), Expect = 0.83
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 191 FTLTQNLLTSLEQQCPNLTTLALDYCNI-DCSMRAICHFPRRLKVLSLRGSKCYNQPLDK 249
F ++ + ++++ CPNL+ ++L CNI D + + LK ++L S C PL
Sbjct: 128 FGISDDGISTIASFCPNLSVVSLYRCNISDIGLETLARASLSLKCVNL--SYC---PLVS 182
Query: 250 SFLFK-IQDYLKELEELDVSECE 271
F K + +LE + +S C+
Sbjct: 183 DFGIKALSQACLQLESVKISNCK 205
>At3g07550.1 68416.m00901 F-box family protein (FBL12) contains
similarity to F-box protein FBL6 GI:6456737 from [Homo
sapiens]
Length = 395
Score = 32.7 bits (71), Expect = 0.83
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 191 FTLTQNLLTSLEQQCPNLTTLALDYCNI-DCSMRAICHFPRRLKVLSLRGSKCYNQPLDK 249
F ++ + ++++ CPNL+ ++L CNI D + + LK ++L S C PL
Sbjct: 128 FGISDDGISTIASFCPNLSVVSLYRCNISDIGLETLARASLSLKCVNL--SYC---PLVS 182
Query: 250 SFLFK-IQDYLKELEELDVSECE 271
F K + +LE + +S C+
Sbjct: 183 DFGIKALSQACLQLESVKISNCK 205
>At2g41170.1 68415.m05085 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 32.7 bits (71), Expect = 0.83
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 18 LLDLSDDVLLCILKYCTPRDLKALGYTCPRLGALVVDRTLWE 59
LLDL D L CIL+ +P +L A+ C L V LWE
Sbjct: 59 LLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWE 100
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 14 GSAELLDLSDDVLLCILKYCTPRDLKALGYTCPRLGALVVDRTLWE 59
G +LDL D L CIL+ P +L + C L V LWE
Sbjct: 58 GKMSILDLPDLPLDCILELLPPSELCTMARVCSSLRERCVSDHLWE 103
>At2g25490.1 68415.m03052 F-box family protein (FBL6) contains
similarity to grr1 GI:2407790 from [Glycine max]
Length = 628
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 192 TLTQNLLTSLEQQCPNLTTLALDYCNI--DCSMRAICHFPRRLKVLSLR 238
T+T L ++ + CPNLT L L+ C+ D + AI +LK +S++
Sbjct: 215 TITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIK 263
Score = 30.3 bits (65), Expect = 4.4
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 610 LRILSLTGFRNITNRSLVHLATAAPRLRFIDFSGTRVTQRGVDTFRS 656
L +L++ G NIT+ SLV +A L +D S ++ G+ S
Sbjct: 520 LEVLNIDGCSNITDASLVSIAANCQILSDLDISKCAISDSGIQALAS 566
>At1g68050.1 68414.m07774 F-box family protein (FKF1) / adagio 3
(ADO3) E3 ubiquitin ligase SCF complex F-box subunit;
identical to FKF1 GI:6960305 and Adagio 3 GI:13487072
from [Arabidopsis thaliana]; contains Pfam profiles
PF01344: Kelch motif, PF00785: PAC motif and PF00646:
F-box domain; contains TIGRfam profile TIGR00229: PAS
domain S-boxidentical to cDNA Adagio 3 (ADO3)
GI:13487071
Length = 619
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 18 LLDLSDDVLLC-ILKYCTPRDLKALGYTCPRLGALVVDRTLWESV 61
+L LSD+VL IL TPRD+ ++G C RL L + ++ + V
Sbjct: 211 ILQLSDEVLAHNILSRLTPRDVASIGSACRRLRQLTKNESVRKMV 255
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 31.1 bits (67), Expect = 2.5
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 475 EPRPEAVNQGASTSKDDPQPSTSNK--TDQKNGEKTENKEPK--QNILYVNVGRRLHAMY 530
E + E G DD + T N D + E+T+N K +++ Y + RLH
Sbjct: 118 EQKLEQEKSGTELPDDDSKKETDNNRLNDDDSKEETDNNRQKDDRSVTYEELRERLHR-- 175
Query: 531 RLAIPVYKVGESGDSQPAAPSRR 553
I K G G +P + RR
Sbjct: 176 --KIDELKGGRGGSDRPRSNERR 196
>At3g03750.2 68416.m00381 SET domain-containing protein low
similarity to G9a [Homo sapiens] GI:287865; contains
Pfam profiles PF00856: SET domain, PF05033: Pre-SET
motif
Length = 354
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 4 PPSSENGGYAGSAELLDLSDDVLLC---ILKYCTPRDLKALGYTCPRLGALVVDRTLWES 60
PP + G A ++++ +D L C IL + PR+L + TC L + T+ S
Sbjct: 9 PPKTRCLGEA--SDIIPAADRFLRCANLILPWLNPRELAVVAQTCKTLSLISKSLTIHRS 66
Query: 61 VDARES 66
+DA S
Sbjct: 67 LDAARS 72
>At3g03750.1 68416.m00380 SET domain-containing protein low
similarity to G9a [Homo sapiens] GI:287865; contains
Pfam profiles PF00856: SET domain, PF05033: Pre-SET
motif
Length = 338
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 4 PPSSENGGYAGSAELLDLSDDVLLC---ILKYCTPRDLKALGYTCPRLGALVVDRTLWES 60
PP + G A ++++ +D L C IL + PR+L + TC L + T+ S
Sbjct: 9 PPKTRCLGEA--SDIIPAADRFLRCANLILPWLNPRELAVVAQTCKTLSLISKSLTIHRS 66
Query: 61 VDARES 66
+DA S
Sbjct: 67 LDAARS 72
>At1g15740.1 68414.m01888 leucine-rich repeat family protein
Length = 585
Score = 31.1 bits (67), Expect = 2.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 589 YINIGPNGQHDQPATR-PDRSNLRILSLTGFRNITNRSLVHLATAAPRLRFIDFSGTRVT 647
Y+N+ D + D NL+IL+L G NITN LVHL +L ++ R+
Sbjct: 314 YLNLNRCNFSDSGCEKFSDLINLKILNL-GMNNITNSCLVHL-KGLTKLESLNLDSCRIG 371
Query: 648 QRGV 651
G+
Sbjct: 372 DEGL 375
>At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 815
Score = 30.7 bits (66), Expect = 3.3
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 194 TQNLLTS--LEQQCPNLTTLALDYCNIDCSMRAICHFPRRLKVLSLRGSKCY 243
T +L +S LE CPN+ L L+ ++D ++ + ++LKVL++ Y
Sbjct: 538 TDDLFSSKWLEMDCPNVEALVLNISSLDYALPSFIAEMKKLKVLTIANHGFY 589
>At5g16030.1 68418.m01874 expressed protein
Length = 339
Score = 30.7 bits (66), Expect = 3.3
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 466 GEQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQ 515
G+Q DVK++E E Q S +D+ + + + +K E E ++
Sbjct: 248 GQQQDVKLEEKEKEEEKQDMSNEEDEEEEEEEKQDMSEEDDKEEEDEQEE 297
>At2g39855.2 68415.m04896 expressed protein
Length = 142
Score = 30.7 bits (66), Expect = 3.3
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 476 PRPEAVNQGASTSKDDP---QPSTSNKTDQKNGEKTENKEPK 514
P P AV QG TS++ QP T+ +T + GE+++NKE K
Sbjct: 43 PPPSAVTQGNLTSRNGAAKYQP-TNFETPNERGERSKNKERK 83
>At4g25340.1 68417.m03647 immunophilin-related / FKBP-type
peptidyl-prolyl cis-trans isomerase-related immunophilin
FKBP46 - Spodoptera frugiperda (fall
armyworm),PIR2:A55320
Length = 477
Score = 30.3 bits (65), Expect = 4.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 462 ENGGGEQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQNILYVN 521
EN GE+ V DE + + +DD Q S +NK+ +K +K K+ +N+L
Sbjct: 228 ENASGEKMVVDNDEQGSNKKRKAKAAEQDDGQES-ANKSKKKKNQK--EKKKGENVLNEE 284
Query: 522 VGR 524
G+
Sbjct: 285 AGQ 287
>At2g21830.1 68415.m02594 DC1 domain-containing protein contains
Pfam profilePF03107: DC1 domain
Length = 569
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 93 YAREAAGCLGHMNCKHKEEEPTDLTINSLYAGV 125
Y+ E LGH+ C +E+EP+ L + LY+ V
Sbjct: 334 YSCEECDFLGHIECILREKEPSPLYLKDLYSCV 366
>At5g45560.1 68418.m05595 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
weak similarity to SP|P79245 Steroidogenic acute
regulatory protein, mitochondrial precursor (StAR) {Ovis
aries}; contains Pfam profiles PF01852: START domain,
PF00169: PH domain
Length = 719
Score = 29.9 bits (64), Expect = 5.8
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 462 ENGGGEQNDVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQNI 517
+ G +N V MDE + + +P+P TS + + + +KTE EP NI
Sbjct: 431 QTNGASRNSVLMDEDSDD--DDEFQIPDSEPEPETSKQDQETDAKKTE--EPALNI 482
>At4g05470.1 68417.m00829 F-box family protein (FBL21) contains
similarity to N7 protein GI:3273101 from [Medicago
truncatula]
Length = 576
Score = 29.9 bits (64), Expect = 5.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 33 CTPRDLKALGYTCPRLGALVVDR--TLWESVDARES 66
C DLKA+G+ CP+L L ++ LW + D +S
Sbjct: 448 CIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDS 483
>At1g29470.1 68414.m03605 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 29.9 bits (64), Expect = 5.8
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 462 ENGGGEQN-DVKMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPK 514
+NG GE++ + + DE + + Q +S+++ + SN T++ GE EN E K
Sbjct: 130 KNGDGEKDTESESDETKQKEKTQLEESSEEN-KSEDSNGTEENAGESEENTEKK 182
>At5g66900.1 68418.m08433 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 809
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 194 TQNLLTS--LEQQCPNLTTLALDYCNIDCSMRAICHFPRRLKVLSLRGSKCY 243
T +L +S LE CPN+ L L+ + D ++ + ++LKVL++ Y
Sbjct: 532 TDDLFSSKWLEMDCPNVEALVLNLSSSDYALPSFISGMKKLKVLTITNHGFY 583
>At4g39980.1 68417.m05662 2-dehydro-3-deoxyphosphoheptonate aldolase
1 / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
1 / DAHP synthetase 1 (DHS1) nearly identical to
SP|P29965
Length = 525
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 372 DDWEMEKRIRLDDIPRVCSCKSVIGNTPSSVYAMIRGDSRNRNDRYDD 419
+ W+++K ++L D P +SV+ + + G++RN +R D
Sbjct: 78 ESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARNLEERLAD 125
>At4g04350.1 68417.m00622 leucyl-tRNA synthetase, putative /
leucine--tRNA ligase, putative similar to SP|P36430
Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA
ligase) (LeuRS) {Bacillus subtilis}; contains Pfam
profile PF00133: tRNA synthetases class I (I, L, M and
V)
Length = 973
Score = 29.5 bits (63), Expect = 7.7
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 511 KEPKQNILYVNVGRRLHAMYRLAIPVYKVGESGDS--QPAAPSRRLDVSSAYQMTRFDPT 568
K+ + N + + RL+ ++ IP KV +SGD PS RL + Y+M++
Sbjct: 679 KDQEGNYVSADTEERLNEHQQVTIPEEKVIKSGDHFVLKEDPSIRL-IPRVYKMSKSRGN 737
Query: 569 TLVSDTTVHRFGRADSDNINYINIGP 594
+ D V +G ADS + + +GP
Sbjct: 738 VVNPDDVVLEYG-ADSLRLYEMFMGP 762
>At3g07340.1 68416.m00875 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 456
Score = 29.5 bits (63), Expect = 7.7
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 472 KMDEPRPEAVNQGASTS-KDDPQPSTSNKTDQKNGEKTENKEPKQNILYVNVGR 524
K + P AV+ K+D P K+++ NG+KT++ +P ++ ++V R
Sbjct: 210 KSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEE-NGDKTKSIDPYKDYIHVRARR 262
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 29.5 bits (63), Expect = 7.7
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 132 SSNGDLNQAVRGTIFSSGPVAQIYDSIPRGVCYNALPEAV 171
SSN D N + GT SS P+AQI S P+ V +++P A+
Sbjct: 24 SSNLDPNSS-SGTADSSSPMAQIRASPPKSVGSSSIPVAL 62
>At1g77260.1 68414.m08998 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 655
Score = 29.5 bits (63), Expect = 7.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 164 YNALPEAVGKQLSG---DWAPPDDTCPGPQFTLTQNLLTSLEQQCPNLTTLALD 214
+N LP + L G DW P DT P + L S+E++ N+T + L+
Sbjct: 546 FNTLPVIYDRGLQGAMHDWCEPFDTYPRTYDLIHAAFLFSVEKKRCNITNIMLE 599
>At1g76180.1 68414.m08846 dehydrin (ERD14) identical to SP|P42763
Dehydrin ERD14 {Arabidopsis thaliana}
Length = 185
Score = 29.5 bits (63), Expect = 7.7
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 468 QNDVKMDEPRPEAVNQG--ASTSKDDPQPSTSNKTDQKNGEKTENKEPKQ---NILYVNV 522
+ V + EP PE ++ + D S+S++ + +GEK + K+ K+ + V
Sbjct: 53 EQKVHISEPEPEVKHESLLEKLHRSDSSSSSSSEEEGSDGEKRKKKKEKKKPTTEVEVKE 112
Query: 523 GRRLHAMYRL--AIPVYKVGESGDSQPAAP 550
+ M +L +P +K E G + AAP
Sbjct: 113 EEKKGFMEKLKEKLPGHKKPEDGSAVAAAP 142
>At1g03530.1 68414.m00334 expressed protein similar to hypothetical
protein GB:O14360
Length = 797
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 472 KMDEPRPEAVNQGASTSKDDPQPSTSNKTDQKNGEKTENKEPKQ 515
+MD E+ +S S D S ++D+ +K ENK+ ++
Sbjct: 241 EMDSAESESETSSSSASSSDSSSSEEEESDEDESDKEENKKEEK 284
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.134 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,572,047
Number of Sequences: 28952
Number of extensions: 712513
Number of successful extensions: 2083
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2059
Number of HSP's gapped (non-prelim): 47
length of query: 684
length of database: 12,070,560
effective HSP length: 86
effective length of query: 598
effective length of database: 9,580,688
effective search space: 5729251424
effective search space used: 5729251424
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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