Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001811-TA|BGIBMGA001811-PA|IPR002086|Aldehyde
dehydrogenase, IPR000648|Oxysterol-binding protein
         (610 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   4.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   6.1  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 186 SFLDKLSDNYYHADLLGQAQT 206
           S L +L +NY+H DL    Q+
Sbjct: 322 SILHELRNNYFHMDLENNVQS 342


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/29 (27%), Positives = 19/29 (65%)

Query: 384 GEESNLLDVGFLKEQRLPRYLVRLENQQD 412
           GE + ++++ +LK   +P +L   +++QD
Sbjct: 192 GELAQVVELEYLKTDLIPMFLSLTQDEQD 220


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.135    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,975
Number of Sequences: 317
Number of extensions: 5680
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 2
length of query: 610
length of database: 114,650
effective HSP length: 61
effective length of query: 549
effective length of database: 95,313
effective search space: 52326837
effective search space used: 52326837
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)