Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001810-TA|BGIBMGA001810-PA|IPR001849|Pleckstrin-like,
IPR000648|Oxysterol-binding protein
(478 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05630.1 68416.m00626 phospholipase D, putative (PLDP2) ident... 35 0.10
At2g47115.1 68415.m05884 expressed protein 31 1.3
At4g39840.1 68417.m05645 expressed protein 31 1.7
At3g16785.1 68416.m02143 phospholipase D zeta1 / PLDzeta1 (PLDP1... 30 2.9
At5g48130.1 68418.m05945 phototropic-responsive NPH3 family prot... 29 5.1
At4g33200.1 68417.m04727 myosin, putative similar to myosin (GI:... 29 6.8
At3g62330.1 68416.m07002 zinc knuckle (CCHC-type) family protein... 29 6.8
At1g59610.1 68414.m06704 dynamin-like protein, putative (ADL3) s... 29 6.8
At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identi... 29 8.9
At5g05710.1 68418.m00628 pleckstrin homology (PH) domain-contain... 29 8.9
At4g28710.1 68417.m04106 myosin heavy chain, putative similar to... 29 8.9
At4g09040.1 68417.m01491 RNA recognition motif (RRM)-containing ... 29 8.9
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 29 8.9
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 29 8.9
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 29 8.9
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 29 8.9
>At3g05630.1 68416.m00626 phospholipase D, putative (PLDP2)
identical to SP|Q9M9W8 Phospholipase D p2 (EC 3.1.4.4)
(AtPLDp2) (Phospholipase D2 PHOX and PX containing
domain) (Phospholipase D zeta 2) (PLDzeta2) {Arabidopsis
thaliana}; similar to phospholipase D GB:BAA24577 from
[Rattus norvegicus]; contains Pfam profile: PF00614
phospholipase D, PF00169 PH domain, PF00787 PX domain
Length = 1046
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 45 SWTKLWCVLKPGLLLLYKSP 64
SWTK+W VLKPG L L + P
Sbjct: 251 SWTKVWAVLKPGFLALLEDP 270
>At2g47115.1 68415.m05884 expressed protein
Length = 300
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 24 DSGHFHSSTPNYTGRVRGSLKSWTKLWCVLKPGLLLLYKS 63
D+ H S P Y RGS + W W L PG LL +S
Sbjct: 39 DTSH-DSLLPLYRSNNRGSARLWASCWTRLHPGWLLFTRS 77
>At4g39840.1 68417.m05645 expressed protein
Length = 451
Score = 31.1 bits (67), Expect = 1.7
Identities = 26/122 (21%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 331 KLVTSSRKRRSSTPGNMLRLNRSPVFRRSGARTDSENEDVPKKLLSDKRSEILCDTPDNI 390
KL+T S SS+ G + N++ + + + + ++N+ K + S L T +
Sbjct: 75 KLLTDSVSSSSSSSGT--KKNQTKLLKPISSSSSTKNQTKLAKTTTMGTSHKLNSTKSSS 132
Query: 391 LITRTAPSVERFARCCSSTSDDEFQRNGDDVSRFNSTPEKYSLIDYVNSPSANLEMVTNE 450
T+T+ +++ ST+ + D+S+ +S+ K + + PS+ L +E
Sbjct: 133 NTTKTSSELKKLNSGTKSTNSTSSIKKSADLSKSSSSKNKTT----IKPPSSKLSSPPSE 188
Query: 451 KR 452
K+
Sbjct: 189 KK 190
>At3g16785.1 68416.m02143 phospholipase D zeta1 / PLDzeta1 (PLDP1)
identical to phospholipase D zeta1 [Arabidopsis
thaliana] GI:15723315, SP|Q9LRZ5 Phospholipase D p1 (EC
3.1.4.4) (AtPLDp1) (Phospholipase D1 PHOX and PX
containing domain) (Phospholipase D zeta 1) (PLDzeta1)
{Arabidopsis thaliana}; supported by cDNA gi:15723314;
non-consensus splice site (GC) at the beginning of first
intron.
Length = 1096
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 45 SWTKLWCVLKPGLLLLYKSP 64
+W K+W VLKPG L L + P
Sbjct: 251 NWQKVWGVLKPGFLALLEDP 270
>At5g48130.1 68418.m05945 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 625
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 426 STPEKYSLIDYVN----SPSANLEMVTNEKRYDRLIAQNVYV 463
S EK S+ Y+N S A+LE+V NEK RL+ Q +++
Sbjct: 424 SQEEKGSICSYLNCQKLSQEASLELVKNEKMPLRLVVQALFI 465
>At4g33200.1 68417.m04727 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]
Length = 1522
Score = 29.1 bits (62), Expect = 6.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 176 NISHEELEKHFNEHASKM 193
N ++E+L++HFNEH KM
Sbjct: 456 NFANEKLQQHFNEHVFKM 473
>At3g62330.1 68416.m07002 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 479
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 320 KMSPSLDDGLLKLVTSSRKRRSSTPGNMLRLNRSPVFRRSGARTDSENEDVP 371
+ P LDD ++ S+ N ++ PV +RS R D E E +P
Sbjct: 5 RSDPELDDDFSEIYKEYTGPASAVTNNNIQDKDKPVKQRSEERCDEEEEQLP 56
>At1g59610.1 68414.m06704 dynamin-like protein, putative (ADL3)
strong similarity to dynamin-like protein 6 (ADL6)
[Arabidopsis thaliana] GI:6651399; contains Pfam
profiles PF01031: Dynamin central region, PF00350:
Dynamin family, PF02212: Dynamin GTPase effector domain,
PF00169: PH domain; identical to cDNA dynamin-like
protein ADL3, GI:4803835
Length = 920
Score = 29.1 bits (62), Expect = 6.8
Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 6/155 (3%)
Query: 32 TPNYTGRVRGSLKSWTKLWCVLKPGLLLLYKSPKAKSSHWVGTVLLTSCQVIERPSKKDG 91
T Y + W++ W VL L + K + ++ GTV L C IE S +G
Sbjct: 582 TAGYLMKKSAKTNGWSRRWFVLNEKTGKLGYTKKQEERNFRGTVTLEECS-IEEISDDEG 640
Query: 92 FCFKLYHPLEQSIWAPRGP---HNETIGAVIQPLPTAH--LIFRAPSQAAGHCWLDGLEL 146
K + + +GP T + + AH L+ +A S + W++ L+
Sbjct: 641 EKSKSSKDKKSNGPDSKGPGLVFKITCRVPYKTVLKAHNALVLKAESMVDKNEWINKLQK 700
Query: 147 ALRCSNAMLRCSRSRPEETVASEAPATRTNISHEE 181
++ + + R + S R + EE
Sbjct: 701 VIQARGGQVGSASMRQSLSEGSLDKMVRKPVDPEE 735
>At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identical
to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis
thaliana]
Length = 1505
Score = 28.7 bits (61), Expect = 8.9
Identities = 9/18 (50%), Positives = 16/18 (88%)
Query: 176 NISHEELEKHFNEHASKM 193
N+++E+L++HFN+H KM
Sbjct: 452 NLTNEKLQQHFNQHVFKM 469
>At5g05710.1 68418.m00628 pleckstrin homology (PH)
domain-containing protein similar to AtPH1 [Arabidopsis
thaliana] GI:5926716; contains Pfam profile PF00169: PH
domain
Length = 144
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 31 STPNYTGRV--RGS-LKSWTKLWCVLKPGLLLLYK-SPKAKSSHWVGTVLLTSC 80
S P TG + +G +K+W + W VLK G L +K S + S G V + SC
Sbjct: 26 SNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFKDSDVTRVSRPRGVVPVESC 79
>At4g28710.1 68417.m04106 myosin heavy chain, putative similar to
myosin [Arabidopsis thaliana] gi|499047|emb|CAA84066.
Length = 899
Score = 28.7 bits (61), Expect = 8.9
Identities = 9/18 (50%), Positives = 16/18 (88%)
Query: 176 NISHEELEKHFNEHASKM 193
N+++E+L++HFN+H KM
Sbjct: 451 NLTNEKLQQHFNQHVFKM 468
>At4g09040.1 68417.m01491 RNA recognition motif (RRM)-containing
protein low similarity to enhancer binding protein-1;
EBP1 [Entamoeba histolytica] GI:8163877, SP|P19682 28
kDa ribonucleoprotein, chloroplast precursor (28RNP)
{Nicotiana sylvestris}; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 304
Score = 28.7 bits (61), Expect = 8.9
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 389 NILITRTAPSVERFARCCSSTSDDEFQRNGDDVSRFNSTPEKYSLIDYVNSPSANLEMVT 448
N ++ + PS+ R R +T D +++ + ST + +++ +S S+ E+V
Sbjct: 31 NHSLSLSTPSLCRLHR--HATFPDSIPAKSRNLTSYFSTTTQEPVLESSSSSSSAPEVVE 88
Query: 449 NEKRYDRLIAQNV 461
E RLIAQNV
Sbjct: 89 EEISKTRLIAQNV 101
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 28.7 bits (61), Expect = 8.9
Identities = 9/18 (50%), Positives = 16/18 (88%)
Query: 176 NISHEELEKHFNEHASKM 193
N+++E+L++HFN+H KM
Sbjct: 468 NLTNEKLQQHFNQHVFKM 485
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 28.7 bits (61), Expect = 8.9
Identities = 9/18 (50%), Positives = 16/18 (88%)
Query: 176 NISHEELEKHFNEHASKM 193
N+++E+L++HFN+H KM
Sbjct: 452 NLTNEKLQQHFNQHVFKM 469
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 28.7 bits (61), Expect = 8.9
Identities = 9/18 (50%), Positives = 16/18 (88%)
Query: 176 NISHEELEKHFNEHASKM 193
N+++E+L++HFN+H KM
Sbjct: 451 NLTNEKLQQHFNQHVFKM 468
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 28.7 bits (61), Expect = 8.9
Identities = 9/18 (50%), Positives = 16/18 (88%)
Query: 176 NISHEELEKHFNEHASKM 193
N+++E+L++HFN+H KM
Sbjct: 453 NLTNEKLQQHFNQHVFKM 470
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.130 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,593,683
Number of Sequences: 28952
Number of extensions: 433645
Number of successful extensions: 1104
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1092
Number of HSP's gapped (non-prelim): 17
length of query: 478
length of database: 12,070,560
effective HSP length: 84
effective length of query: 394
effective length of database: 9,638,592
effective search space: 3797605248
effective search space used: 3797605248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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