Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001809-TA|BGIBMGA001809-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (416 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    29   0.31 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.95 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.95 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.95 
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   6.7  

>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 28.7 bits (61), Expect = 0.31
 Identities = 19/80 (23%), Positives = 38/80 (47%)

Query: 55  KNKSNSNFEDATSPSKDFARSASAIQVAQNNERFRKVSTPASSRHGLQNISSRSHLPSTP 114
           ++ S+ + + + S S D  +SA   +        R++ST  + +    + +  +  PSTP
Sbjct: 269 QHPSSQHQQPSRSASIDLMQSALVDERDYLAAEDREISTVENKKKRKMSTTCDNSSPSTP 328

Query: 115 SLLGSVPEGKASRVNSQEAF 134
           SL+     G  S+ +S  +F
Sbjct: 329 SLMNERQGGYESQASSHSSF 348


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 0.95
 Identities = 18/72 (25%), Positives = 33/72 (45%)

Query: 63  EDATSPSKDFARSASAIQVAQNNERFRKVSTPASSRHGLQNISSRSHLPSTPSLLGSVPE 122
           + + S S D  +SA   +        R++ST  + +    + +  +  PSTPSL+     
Sbjct: 317 QPSRSASIDLMQSALVDERDYLAAEDREISTVENKKKRKMSTTCDNSSPSTPSLMNERQG 376

Query: 123 GKASRVNSQEAF 134
           G  S+ +S  +F
Sbjct: 377 GYESQASSHSSF 388


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 27.1 bits (57), Expect = 0.95
 Identities = 18/72 (25%), Positives = 33/72 (45%)

Query: 63  EDATSPSKDFARSASAIQVAQNNERFRKVSTPASSRHGLQNISSRSHLPSTPSLLGSVPE 122
           + + S S D  +SA   +        R++ST  + +    + +  +  PSTPSL+     
Sbjct: 317 QPSRSASIDLMQSALVDERDYLAAEDREISTVENKKKRKMSTTCDNSSPSTPSLMNERQG 376

Query: 123 GKASRVNSQEAF 134
           G  S+ +S  +F
Sbjct: 377 GYESQASSHSSF 388


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 27.1 bits (57), Expect = 0.95
 Identities = 18/72 (25%), Positives = 33/72 (45%)

Query: 63  EDATSPSKDFARSASAIQVAQNNERFRKVSTPASSRHGLQNISSRSHLPSTPSLLGSVPE 122
           + + S S D  +SA   +        R++ST  + +    + +  +  PSTPSL+     
Sbjct: 269 QPSRSASIDLMQSALVDERDYLAAEDREISTVENKKKRKMSTTCDNSSPSTPSLMNERQG 328

Query: 123 GKASRVNSQEAF 134
           G  S+ +S  +F
Sbjct: 329 GYESQASSHSSF 340


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 6.7
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 11/62 (17%)

Query: 62  FEDATSPSKDFARSAS---------AIQVAQNNERFRKVSTPASSRHGLQNISSRSHLPS 112
           FED   P+  FAR+AS          IQ+ Q  ++ +++       H  Q +  +   PS
Sbjct: 36  FEDLHDPASSFARNASFTLGMGLANVIQLQQQQQQQQQLHHSPHQYH--QQVQHQPQPPS 93

Query: 113 TP 114
           TP
Sbjct: 94  TP 95


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,872
Number of Sequences: 2123
Number of extensions: 10521
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 5
length of query: 416
length of database: 516,269
effective HSP length: 66
effective length of query: 350
effective length of database: 376,151
effective search space: 131652850
effective search space used: 131652850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)