Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001809-TA|BGIBMGA001809-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
(416 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 33 0.35
At1g29240.1 68414.m03576 expressed protein contains Pfam profile... 33 0.47
At1g79250.1 68414.m09239 protein kinase, putative similar to vir... 31 1.1
At1g28090.2 68414.m03439 polynucleotide adenylyltransferase fami... 30 2.5
At1g28090.1 68414.m03438 polynucleotide adenylyltransferase fami... 30 2.5
At5g47680.1 68418.m05886 expressed protein contains Pfam profile... 30 3.3
At1g75260.1 68414.m08743 isoflavone reductase family protein sim... 30 3.3
At5g55030.2 68418.m06856 expressed protein 29 7.6
At5g55030.1 68418.m06855 expressed protein 29 7.6
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 33.1 bits (72), Expect = 0.35
Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 40 PEETPSQMNGSPPMFKNKSNSNFEDATSPSKDFARSASAIQVAQNNERFRKVSTPASSRH 99
P + + + SP S S +SPS A S+++ A N+ F S+ A+S
Sbjct: 162 PASSAATPSSSPFGAAPASGSTPLFGSSPSLFSAPSSAS---ASNSSLFGASSSAATSTS 218
Query: 100 GLQNISSRSHLPSTPSL-LGSVPEGKASRVNSQEAFGKKLAIXXXXXXXXXXXXFQYMST 158
L S S +TPS + S G +S + ++ S+
Sbjct: 219 PLFGAPS-SATGATPSFSVASSAPGSSSSIFGATGSSPSFSVASSASGSSPSIFGATGSS 277
Query: 159 PFHGSTLSAFEKPSEFASQFSLKSVTDSLAP 189
PF GS+ SA PS FAS S + T S +P
Sbjct: 278 PFFGSSSSAGSTPSLFASS-SSGATTSSPSP 307
>At1g29240.1 68414.m03576 expressed protein contains Pfam profile:
PF05097 protein of unknown function (DUF688)
Length = 577
Score = 32.7 bits (71), Expect = 0.47
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 47 MNGSPPMFKNKSNSNFEDATSPSKDFARSASAIQVAQNNERFRKVSTPASSRHGLQNISS 106
M + P FK K NS TSPS D +S+ Q+ + +K++ + S+H +S
Sbjct: 279 MLNTVPGFKAKHNSPI---TSPSHDQVKSSKVAQLKYRFQSVKKLALDSVSKH---KLSG 332
Query: 107 RSHLPSTPS 115
+ H P PS
Sbjct: 333 KVHSPVHPS 341
>At1g79250.1 68414.m09239 protein kinase, putative similar to viroid
symptom modulation protein/dual-specificity protein
kinase [Lycopersicon esculentum] gi|7672777|gb|AAF66637
Length = 555
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 31 ERNPKVVFTPEETPSQMNGSPPMFKN--KSNSNFEDATSPSKDFARSASAIQVAQNNERF 88
E K +F P++ + + P F N + N + + +SP + S S + NN
Sbjct: 38 EMQQKPLFDPKKMDNLIKPEPAGFTNHHRPNPSPKIPSSPGSNMTESQSNLNTKPNNNNS 97
Query: 89 RKVSTPASSRHGLQNISSRSHLPST 113
S +S + +++ SS P T
Sbjct: 98 NNNSNMSSRSNSIESTSSNPSKPHT 122
>At1g28090.2 68414.m03439 polynucleotide adenylyltransferase family
protein low similarity to SP|P13685 Poly(A) polymerase
(EC 2.7.7.19) {Escherichia coli O157:H7}; contains Pfam
profile PF01743: polyA polymerase family protein
Length = 505
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 59 NSNFEDATSPSKDFARSASAI--QVAQNNERFRKVSTPASSRHGLQNISSR 107
NS+F++ +SP KD A S S I QV + E R + ++R + N S+
Sbjct: 381 NSHFQELSSPEKDTADSESKISQQVIKLAESIRSAARKLNNRDYIANAMSK 431
>At1g28090.1 68414.m03438 polynucleotide adenylyltransferase family
protein low similarity to SP|P13685 Poly(A) polymerase
(EC 2.7.7.19) {Escherichia coli O157:H7}; contains Pfam
profile PF01743: polyA polymerase family protein
Length = 541
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 59 NSNFEDATSPSKDFARSASAI--QVAQNNERFRKVSTPASSRHGLQNISSR 107
NS+F++ +SP KD A S S I QV + E R + ++R + N S+
Sbjct: 417 NSHFQELSSPEKDTADSESKISQQVIKLAESIRSAARKLNNRDYIANAMSK 467
>At5g47680.1 68418.m05886 expressed protein contains Pfam profile
PF04243: Protein of unknown function (DUF425)
Length = 344
Score = 29.9 bits (64), Expect = 3.3
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 6/107 (5%)
Query: 40 PEETPSQMNGSPPMFKNKSNSNFEDATSPSKDFARSASAIQ-VAQNNER----FRKVSTP 94
PE P+ +N SPP+ KN + +K + A + + ER + +
Sbjct: 16 PESEPAPVNVSPPLSKNAQKKQLKQQRYEAKKAEKKAQEKEHKRKEGERKLKEWEETLAN 75
Query: 95 ASSRHGLQNISSRSHL-PSTPSLLGSVPEGKASRVNSQEAFGKKLAI 140
A+ L+ I SR L E K R+N + G+K+ +
Sbjct: 76 ATEEERLKLIESRKSLRKERMEKRSEEKEKKIERLNQAKEIGQKIVV 122
>At1g75260.1 68414.m08743 isoflavone reductase family protein
similar to SP|P52577 Isoflavone reductase homolog P3 (EC
1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile
PF02716: Isoflavone reductase
Length = 593
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/94 (22%), Positives = 39/94 (41%)
Query: 44 PSQMNGSPPMFKNKSNSNFEDATSPSKDFARSASAIQVAQNNERFRKVSTPASSRHGLQN 103
P + SP + ++S T PS+ R A Q +++ + + + + SR +
Sbjct: 9 PFFSSNSPSRISSGTSSPSPPPTPPSRPPFRPAGIAQPSKSETKPKASPSLSRSRSNVAA 68
Query: 104 ISSRSHLPSTPSLLGSVPEGKASRVNSQEAFGKK 137
+++ S PSL + P A + N Q K
Sbjct: 69 LAASSSASQLPSLGAATPTRLAKQTNQQSGSPSK 102
>At5g55030.2 68418.m06856 expressed protein
Length = 639
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 83 QNNERFRKVSTPASSRHGLQNISSRSHLPSTPSLLGSVPEGKASRVNSQ 131
+ NE K PA + G + + +H P+ +G++ EG S V +Q
Sbjct: 238 KTNETLFKTPLPAKEQQGSRPVRDGNHAFPFPASIGALSEGSPSFVATQ 286
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 50 SPPMFKNKSNSNFEDATSPSKDFARSASAIQVAQNNER-FRKVSTPASSRHGLQNI--SS 106
+PP + ++ ED+ + S AR+ +I NN++ F S P SS+ +++ S
Sbjct: 453 APPKISSPQSARSEDSGNASVAAARAWMSIGAGGNNKQTFENASNPKSSQISAESLYNPS 512
Query: 107 RSH 109
R H
Sbjct: 513 REH 515
>At5g55030.1 68418.m06855 expressed protein
Length = 639
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 83 QNNERFRKVSTPASSRHGLQNISSRSHLPSTPSLLGSVPEGKASRVNSQ 131
+ NE K PA + G + + +H P+ +G++ EG S V +Q
Sbjct: 238 KTNETLFKTPLPAKEQQGSRPVRDGNHAFPFPASIGALSEGSPSFVATQ 286
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 50 SPPMFKNKSNSNFEDATSPSKDFARSASAIQVAQNNER-FRKVSTPASSRHGLQNI--SS 106
+PP + ++ ED+ + S AR+ +I NN++ F S P SS+ +++ S
Sbjct: 453 APPKISSPQSARSEDSGNASVAAARAWMSIGAGGNNKQTFENASNPKSSQISAESLYNPS 512
Query: 107 RSH 109
R H
Sbjct: 513 REH 515
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,894,148
Number of Sequences: 28952
Number of extensions: 275534
Number of successful extensions: 737
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 726
Number of HSP's gapped (non-prelim): 15
length of query: 416
length of database: 12,070,560
effective HSP length: 83
effective length of query: 333
effective length of database: 9,667,544
effective search space: 3219292152
effective search space used: 3219292152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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